Vibrio cyclitrophicus: FAZ90_19230
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Entry
FAZ90_19230 CDS
T06393
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
FAZ90_19230
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcc01002
]
FAZ90_19230
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcc01011
]
FAZ90_19230
Peptidases and inhibitors [BR:
vcc01002
]
Cysteine peptidases
Family C82
FAZ90_19230
Peptidoglycan biosynthesis and degradation proteins [BR:
vcc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FAZ90_19230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Amphi-Trp
Motif
Other DBs
NCBI-ProteinID:
QCI73164
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Position
2:915395..916366
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AA seq
323 aa
AA seq
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MSYCANTTPLHSMRTQIRKVALPLVRVTLLVAAMASSCVSAATFELPPAESRIVGRIQQH
EVAAGETLAIIAKQYDIGFLSLMAANKGVDPFLPAEGYVLSIPSRFILPDTPREGIVINL
AELRLYFFEPDKNQVHVFPVGIGRVGRDTPEMITKISQKRPNPTWTPPNSIRKEYLEKGI
ELPRVVPAGPENPLGEYALRLAYGAGDYLIHGTNKDFGIGLRVSSGCIRMEPKDIEWLFE
QVNRGEQVTIIDEPIKVSLEPDRSVFVEAHEPLTRSDGSKKALQIPVELKWWLEDADLPN
SKAKAVIFAQNGVPVEIAPPHHL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtattgcgctaacactacgcctttgcactctatgagaacacagatacgtaaggta
gctttgcctctagtgagggtcaccttgcttgtggcggcgatggcttcgtcgtgtgtgtct
gcggcgacctttgaactgcctccggcggaaagccgcatcgtcggcaggatacaacaacac
gaagtggctgctggcgaaacgttagccatcattgcgaaacaatacgatattggctttctc
tctttaatggcagcaaacaaaggggtggatccttttcttcctgcagaaggctacgtgtta
agtattcctagccgtttcattttgcctgacaccccaagagaagggattgtcatcaatctt
gctgagttaaggttgtacttttttgagccggataagaaccaggttcatgtttttcctgta
ggcattggtcgagtagggcgtgatacacccgagatgatcaccaagataagtcagaaaaga
cctaatccaacttggactcctcccaattcaattcgtaaagagtatttagagaaaggtatt
gagttaccacgagtggtccctgcgggtcctgagaatcctctaggtgagtatgcattgcga
cttgcttatggtgcgggtgattatcttatacacggcactaataaagattttggtataggc
ttgcgagtcagctccggatgtattcgcatggaaccgaaagatatcgaatggctttttgaa
caggttaaccgcggtgagcaagtcacaatcatcgatgagccgatcaaagtctctttagaa
cccgatagaagcgtgtttgttgaagcgcatgaaccattgacgcgaagtgatggttctaag
aaggcgttgcagattccggttgaactaaaatggtggcttgaagatgctgatttgccaaat
tcaaaggctaaagcggttatttttgctcaaaatggtgtgccggttgagatagcaccaccg
caccatttgtga
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