Vibrio cyclitrophicus: FAZ90_19575
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Entry
FAZ90_19575 CDS
T06393
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vcc01002
]
FAZ90_19575
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vcc02042
]
FAZ90_19575
Enzymes [BR:
vcc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
FAZ90_19575
Peptidases and inhibitors [BR:
vcc01002
]
Metallo peptidases
Family M9
FAZ90_19575
Bacterial toxins [BR:
vcc02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
FAZ90_19575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
SeqA_N
Motif
Other DBs
NCBI-ProteinID:
QCI73228
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All DBs
Position
2:1005615..1008038
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AA seq
807 aa
AA seq
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MSHTRLFPRHRLAIACILASVSSFSFAEHQCDVIDLQQVADLALSVSAANNRCYGSWFSA
PENALNNIYSEASLSRIQIALSLEVAGYRGEVQQARKIENLGEFVRAAYYVRYNAQAEDF
SKALSQRFAQSTNAFLANTNALDQGREQVGAMKSLTLMVDNVKQLPLTMDAQLAALRHFN
QETAQDSQWVDGLNNLFRAMAGHAARDDFYDYMASHTQHIDTLAVFARDNTWALDTDASF
LVYNAVRETGRLLASPDKSTKDKALRFMQQVMVQNPLGSEHDKLWLAAVEMMGYYAPDGL
NGLDLEQAKRDLSMRVLPNRHECQGPAIIRSQDLTQAQSQEACDVLAGKEADFHQIANTG
QQPVADDNNERVEVAVFGSKGSYTDYSAFLFGNTTDNGGQYLEGNPSEVGNVARFVAYRY
ANGDDLSILNLEHEYTHYLDARFNQYGSFNDNLAHGYVVWWLEGFAEFMHYKQGYDAAVG
LISSGKMSLSDVLATTYSHDSNRIYRWGYLAVRFMIEEHPQEVQSLLALSRAGKFSEWAQ
QVKVLGLQYNGEFERWLDTVSSEPTKPTDPTNPTDQAIVLAANQGVVLNGEAYSEQLFYV
DVPENTTHFEVSIEGSALGQSDADLYMSYNKEAHYYDFEFSQYGNGSNEVVTFEPEASGY
IQTGRYYMSIAGRTDFNDVKLLASLETETLPPPAQEQDDLTPIIFESGQPQILTVHQRRY
AAVYVPEGVQEVRVWLTDKKATQSDTGNVDLFASRSYWPTAGKYEYTSNYTGSNEYLQIP
VSEAGYLHFLLSADLEGDDVEMLVYVH
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatacccgtttattcccgcgtcatcgtttggcgatcgcttgcatccttgccagt
gtttccagcttctcttttgccgaacatcaatgtgatgtcattgatcttcaacaggtcgct
gatcttgctctttctgtctctgctgcaaataataggtgctatggatcttggttctctgca
ccggaaaatgcattaaataatatttatagtgaagcgagtcttagccgcattcaaatcgcg
ctgagcttggaagttgccggctatcgaggggaagtacaacaagcccgtaaaatcgaaaac
cttggtgagtttgttcgtgccgcttattacgttcgctataacgcgcaagctgaagatttc
tctaaagccttgagtcaacgttttgctcaatcgaccaatgcttttcttgcgaatacaaat
gcattagaccaaggtcgcgaacaagtcggggcaatgaagagcctgacgttaatggtcgat
aacgttaagcaattgccactaacaatggatgcgcaacttgcggcattacgtcactttaat
caagaaacggcgcaagactcacaatgggtcgacgggttaaacaacctgtttcgagcaatg
gcagggcacgcagctagagatgacttctacgattacatggcgagccatacccagcacatc
gatacgttggcggtattcgctcgtgataacacgtgggctttagatactgatgcgagcttc
cttgtttataacgccgtgcgtgaaaccggtcgtttgctggcaagcccagataaatcaacg
aaagacaaagcgctgcgttttatgcagcaagtgatggtacaaaacccacttggtagtgag
catgacaagctttggttagcggcggttgagatgatggggtattacgcgccagacggcttg
aatggattggatttagagcaagcaaagcgtgatttatcaatgcgtgtacttcccaatcgt
catgagtgccaaggacctgcgattattcgttctcaagatttaacgcaagcacaatcacaa
gaagcgtgtgatgtactcgcggggaaagaggcggacttccatcaaatagcgaacacaggt
caacaacctgtcgccgacgataataacgagcgagttgaagtcgcggtgtttggcagtaaa
ggtagctacactgattactctgcattcttgtttggaaacaccacagacaacggtggtcag
tacttagaaggaaacccatcagaagtgggtaacgtcgctcgctttgtagcttaccgttac
gctaacggcgatgacctttcaattctcaatttggagcatgagtacactcactatctcgat
gcgcgttttaaccaatacgggtcgtttaacgacaacttggcacatggttacgttgtgtgg
tggctagaaggttttgctgagttcatgcattacaagcaaggttacgatgccgctgttggt
ttgattagtagcgggaagatgagtttgtcggatgtgcttgctaccacttactcccatgat
tctaaccgtatctaccgatggggctacttggcggtgcgctttatgatagaagaacatcct
caagaggtacaaagcttattggcactgtctcgtgctggcaaattttcagaatgggcacaa
caagtgaaagtgcttgggctgcaatacaatggtgagtttgagcgttggctagacactgtt
tcaagtgaaccaacaaagccgactgatcctacaaatccaacagaccaagccatagtgctt
gcagcaaaccaaggtgtggtgttgaacggcgaggcgtacagtgagcagttgttctacgtc
gatgtaccagagaacaccacgcattttgaggtttcgattgaaggtagtgctctgggtcaa
agtgatgcagacctttatatgagttacaacaaagaggcgcattattatgatttcgagttc
agccaatacggtaacggcagtaatgaagttgtgacgtttgagccagaagcgtcgggttac
atccaaacaggtcgttactatatgagtatcgcagggcgcaccgatttcaatgacgtgaaa
ctgttggcatcgttagaaacagaaacgctaccaccaccagcccaagaacaagatgattta
acaccaataatcttcgaatcaggtcagccacaaatacttactgttcatcaacgccgctat
gctgcggtgtatgttcctgaaggtgtgcaggaggtgcgagtgtggttaacggataaaaaa
gcgactcaatcagataccggtaatgtcgatctgtttgctagtcgctcatattggccaacc
gcagggaaatacgagtatacgtcgaactacacaggtagtaatgaatatctgcaaattccg
gtgagcgaggcgggttatttgcatttcttactcagcgcagacttagaaggggatgatgtt
gagatgttggtgtacgttcactaa
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