Vibrio cyclitrophicus: FAZ90_19920
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Entry
FAZ90_19920 CDS
T06393
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_19920
Transporters [BR:
vcc02000
]
Other transporters
Pores ion channels [TC:
1
]
FAZ90_19920
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Ortholog
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Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
Na_H_antiport_2
Motif
Other DBs
NCBI-ProteinID:
QCI73295
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Position
2:1082121..1083725
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AA seq
534 aa
AA seq
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MMKVWRCLLLMLTLVAFGSFAQGVDKIAEAQDQLMLDLTTLETAHDAEKPFLEDILRRKN
QALREEIFSQLSSDKEEGLDTVLAQQVELLQHLLSLNEVKIVSMSKENRSAEGDAKKRLE
LLIQKRIGMMDVYYQQLSKTLSWSKERGVDVTAAESQLKAALISRSQYLTNAILYTDTQR
QDLERRLSFVSEEEKATIKTELVRFSERTSVMVASLEKNISMMAPFGVDVTSYKRILLAT
TGDINADVLDVDVALDLLDSWLRSFSSWAFENTPSFVVKLALFLGILYVTRLVANVARKT
VRKSVSHSKMDFSVLMQEFFVSIASKAVVFIGLLIALSQIGIELAPLLTGFGVAGVIIGF
ALQDTLSNFASGLMILIYRPYDVGDMVKVAGVQGTVKDMSLVSTTIQTIDNQRLVIPNNK
IWGDVINNITAERVRRVDMVFGIGYSDDIDKAKGVLNDIILAHPLVLKTPEHMIKLHTLN
TSSVDFVVRPWVKTEDYWDVYWDVTETVKKRFDEEGITIPFPQRDVHIYNHEEN
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggtttggcgttgtctattgttgatgttgacgcttgtcgcatttggaagtttt
gcacaaggcgttgataaaattgcagaagcacaagatcagctaatgctggatctaacaaca
ttagaaaccgcgcatgatgctgagaagccgtttctagaagatatattaagacgaaagaac
caagcacttcgtgaggagattttttcccagttatcctccgataaagaggaagggttagat
accgttcttgctcagcaggttgaacttttacaacatttactgtcattgaacgaagttaag
attgtctcgatgagtaaagagaatcgttcggctgaaggggatgctaaaaagcgtcttgag
ctgctgattcaaaaacgaattgggatgatggatgtctactatcaacaactctctaaaact
ttaagttggtcgaaagaaagaggcgtcgatgtaacggccgcggaaagccagttaaaagcg
gcattgatttctcgttctcaatatctcactaatgcgattctttacacagacactcagcgt
caagatctagaacgccgcttgtcttttgttagtgaagaagaaaaagcgacgatcaaaact
gaactagtacgctttagcgaacgaaccagtgtcatggtcgccagtttagagaaaaacatc
tctatgatggcgccatttggtgtggatgtgacgtcttacaagcgcatcctattggcgacg
acaggggacattaatgctgacgtactggatgttgatgtcgcattagatctattggatagc
tggttgcgttcgtttagttcatgggcatttgaaaatactccttcttttgtcgtcaagctt
gcactgttcttgggtattttgtacgtaactcggcttgttgccaatgttgctcgtaagacg
gtccgtaagagtgtttcgcattcaaaaatggatttcagcgtattgatgcaagaatttttt
gtatccatcgcctctaaagctgttgtgtttattggtttgcttattgccctatctcagata
ggaatagagcttgcaccattacttactggttttggtgttgcgggtgtcatcattggtttt
gcgttacaagatactttgtctaactttgcatcaggtttgatgatcttaatctatcgtcct
tacgatgttggtgacatggttaaagtggctggcgtgcaaggaacggtaaaggacatgagt
ttagtgtcaaccacgattcaaactatcgataaccaacgcttggtgatccctaacaataag
atctggggtgatgtgatcaataacattactgcagagcgtgttagacgtgttgacatggtt
tttggtattggttattccgatgatatcgataaagcaaaaggtgtgttaaatgacatcatt
cttgcgcatcctttagtgcttaaaacaccagaacacatgatcaagcttcacaccttgaat
acgtcttcggttgattttgtagtgagaccttgggttaagactgaggattactgggatgta
tattgggatgtgacggaaactgtgaagaaacgctttgatgaagaaggcatcacgattcca
ttcccacaacgcgatgtacatatttacaatcacgaagagaattag
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