Vibrio cyclitrophicus: FAZ90_19960
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Entry
FAZ90_19960 CDS
T06393
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ90_19960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_19960
02044 Secretion system [BR:
vcc02044
]
FAZ90_19960
Transporters [BR:
vcc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FAZ90_19960
Secretion system [BR:
vcc02044
]
Type I secretion system
Adhesin protein transporter
FAZ90_19960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Neur_chan_memb
AAA_25
EcsB
AAA_30
AAA_16
USP8_interact
AAA_28
NB-ARC
DO-GTPase2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCI73303
LinkDB
All DBs
Position
2:1103305..1105464
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AA seq
719 aa
AA seq
DB search
MVEQKDSWLGCVEWLCEHFNVRSHPSKIVSGLPLNEGRLNESLFPRAIEKSGLTLSHVKK
ELLTQCQFPVVAVNSATGSPLVVTQGSGGEFQVLDCETNSSQETSLKDLVAQVESYVWQV
GAQALDDARVQSHERSENKSNTRWLWRVVKEVKPWYRDLFIASFLINLLALVVPLFTMNV
YDRVVPNQAFNTLWVLAAGVGIVVIFDWVLRSSRSSVTDMAGRYIDNKLSSQLFSKVLGM
KLENRPQSVGAFARQLQDFDSVKDFFTSISLVTLVDLPFTLLFLFLIGWLGGAMMFIPVA
IMLVLIVLSIAMKGKVEKTFDETARLSTQRQAQLFDCLTTLPDIKQNNAEGITQKRWEQT
ISSLSQWQTQSRHYSNIVTHSIQSSQQIVTITLIIFGVYQISEGLLSMGGLIAVVMLSGR
AASSVNQLSLLLLRFQQTRSAVEGLNQIMDLPQEESKHQVIDKGDFDGGVRLDEVTFTYP
ETQSPALKEISFEIKPGERVGLVGAAGAGKTTLLSIVARQYLPTTGQAFYQEIDGQLWPT
SVLRSGMGWVGQTTNLIFGSVYDNVTLGATNVDEEKLRQALQQSGLNGYMGRLSNGLETP
VGEGGRLLSGGQRQAVAIARALYRCPKLLIMDEPTSALDNQAEIQFFNALQSMPRETSML
ISSHKSSFLMMCDRVVVLDKGQIVAEGEPKDILSLQKKSAPKGASRFKTVSVVKGGRHE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttggtagaacaaaaagacagctggctaggttgtgttgaatggttatgtgagcattttaat
gttcgcagccatccttccaaaatagtgtctggcctacctttaaatgaaggaaggctcaat
gaatccctttttccaagagctattgaaaaatcggggttaactttgagccacgttaaaaaa
gaattactgactcaatgtcagttccctgttgttgctgttaattccgcgacagggagcccc
cttgttgtcactcaaggctccggtggcgaatttcaagtattggattgtgaaaccaactca
agccaagaaacatcgttaaaagacttggttgctcaagtggaatcgtatgtgtggcaagta
ggtgctcaagcacttgatgatgcgcgtgttcaatcccatgaacgtagcgagaataaatcc
aacacccgttggttatggcgtgtcgtcaaagaagtgaaaccttggtatcgagacctgttt
atcgcttcattcttgatcaacttactcgcgctagtcgtgcctctgtttaccatgaacgtg
tacgaccgcgtagtgccaaaccaagcgtttaacacgctttgggttctggcagcaggcgtt
ggtattgtcgttatttttgattgggtgttgagaagctcacgcagctctgtgactgatatg
gctgggcgctatattgataacaagttgtcttcccaattgttctcaaaagtccttggtatg
aagttggaaaatcgacctcagtcggtaggcgcctttgccagacagcttcaagatttcgat
agcgtgaaagatttcttcacttctatttctttggttactttagtcgacctgccattcacc
ttgttattcctattccttatcggctggctcggtggtgcgatgatgttcatccctgtcgcg
atcatgttggtattgatcgtgctaagcattgcgatgaaaggtaaagtcgagaaaacattc
gatgaaaccgcacgtttgtcgacacaaagacaagcacagctgtttgattgcttaacaact
cttccggatatcaagcaaaacaatgctgaaggtattacccagaagcgttgggaacagact
atttcatcgctctctcaatggcagactcaatctcgccactactctaatatcgtgacacat
tccattcaatcgagtcagcagatcgtcaccattactctcatcatcttcggcgtgtatcag
atctctgaaggcttgctgagtatgggtggtttgatagctgtggtgatgttgagtggacgt
gccgcaagctcggtgaaccaactttctcttctattgctgaggtttcaacaaacacgctca
gccgttgaaggcctaaatcagatcatggacttaccgcaagaagagtccaagcatcaagtg
attgataagggtgactttgacggcggggttaggctggatgaagttacgtttacttatcca
gagactcaaagcccagcgctaaaggaaatctcttttgaaataaaaccgggtgagcgagtt
ggccttgttggtgcggcaggcgcaggaaaaaccacacttttatcgattgttgcacgccaa
tatttaccaacaacaggacaagctttctatcaagagattgatgggcagttatggccaacc
agtgtcttgcgcagtggtatgggttgggtggggcaaaccaccaatcttatctttggcagt
gtttacgacaacgtcacactgggtgcgaccaacgttgatgaagaaaagctaagacaagcg
ctgcaacagtccggcctcaacggttacatggggcgcttaagcaatggcttagaaacgcct
gtcggtgaaggtggccgattgctttcaggaggtcaacgccaagctgtggctatcgcaagg
gctttataccgttgtccaaaattgctgatcatggatgaaccaaccagcgcacttgataat
caagctgagattcagttctttaatgcactacaaagtatgccgcgagaaacttcgatgctg
atcagctcgcacaaatcttccttcttgatgatgtgtgatcgtgtggttgtattagataaa
ggtcagatcgtggcagagggtgagccaaaagacattctctctctacagaagaaaagtgca
cccaaaggggcgagtcggtttaagacggtttcagtggtgaagggaggccgtcatgagtaa
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