Vibrio cyclitrophicus: FAZ90_20820
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Entry
FAZ90_20820 CDS
T06393
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
vcc
Vibrio cyclitrophicus
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcc03009
]
FAZ90_20820
03016 Transfer RNA biogenesis [BR:
vcc03016
]
FAZ90_20820
Enzymes [BR:
vcc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
FAZ90_20820
5.4.99.29 23S rRNA pseudouridine746 synthase
FAZ90_20820
Ribosome biogenesis [BR:
vcc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FAZ90_20820
Transfer RNA biogenesis [BR:
vcc03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
FAZ90_20820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QCI73462
LinkDB
All DBs
Position
2:complement(1301381..1303057)
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AA seq
558 aa
AA seq
DB search
MSANLTQYTPLHLVNSNVDLALPTRFTFPYYYTPHPTCELAMLQLQQSLTDCGVNETSQG
NLYAVLLVQNPTTQELGYLSAFSGLQLDPALIYQLNNINFVPPAFDSEKFQSQNSANLAL
QLQLENDIKKLQQSHNLDTLLVELEELKVESAQAIESFQLAMAANKAQRNELREQANHEK
ALGNQELASNLLKQLGNQSSQEKRDLKGLRIEWKQKIAERQSQVDAIESELKNRKQGYQV
ISAQLETQRLSHYHFINQAKQSKSLLELLDGKDALEGSGDCCLPKLLNFAFECGLKPLAL
SEFWWGQPPKSQIRQHGNLYPVCQSKSFEILDHQLIGIELEDNPLIVNPAIGKSFDIVYE
DKEIVVVNKPDEFLSVPGKFIEDSIYTRIKARYPNATGPLIIHRLDMSTSGLLILALTAE
SNKHIQKQFIDRTVVKRYTALLEGEIDGKSGDISLPLRGDITDRPRQLVCHKHGRNAETY
WEAVSSNNGKTKVHLYPKTGRTHQLRVHCAHPLGLGLPIRGDDLYGYKRERLHLHAGYLK
LIHPTTGEWMEFEVPSEF
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaacctcactcaatacacacctctgcacctagtaaattcgaatgtagattta
gcgctaccgactcgctttacgtttccgtattactataccccgcaccctacgtgtgaatta
gctatgctgcagcttcaacagtcgcttacggactgtggtgtcaatgaaacctcgcaaggt
aatctctacgcagtgctgcttgttcagaatccaaccacgcaagagttgggctacctttct
gcgttttcaggcttgcagttagatccggctttgatctatcagttaaacaacattaacttt
gttccaccagccttcgattcagaaaagtttcaatctcaaaatagtgcaaacctcgctctg
cagttgcaactagagaatgacattaagaagctacaacagtcgcacaacctggacacatta
ttggtagagcttgaagagttaaaagtcgaatcagcacaagctatcgagtcctttcagtta
gccatggccgcaaataaagctcagcgcaacgaactcagagagcaagccaatcacgaaaag
gcattagggaatcaagagttagcatcgaacctactcaagcaattaggtaaccaaagtagc
caagaaaagcgagacttaaaaggacttcgtatagaatggaaacagaagattgcagaacga
caatcgcaagttgatgcgatagaaagtgaactgaaaaatcgtaagcaaggttaccaagtc
atctcggcacaattggaaactcaacgtttatcgcactatcactttatcaatcaagccaag
caatccaagagcttgctagaattattagacggtaaagatgctcttgagggctcgggagat
tgttgtctacctaagttgctcaactttgcgtttgaatgcggtctaaaacctttggcgttg
tctgagttttggtgggggcaaccaccaaaatctcaaattcgccaacacggtaatctatac
cctgtttgccaaagcaaaagcttcgagattctagaccatcaacttatcggtattgaattg
gaagataaccctttgatcgttaaccctgcaatcggcaaatctttcgatattgtttatgaa
gacaaagagatcgtggtggtaaataaacctgacgaatttctctcggttcctggcaagttt
atcgaagactcaatttatacacgcatcaaggcgcgttacccaaatgcgacaggccctttg
atcatccatagactggacatgtcgacctctggcttattaattttggcgcttacagccgaa
tccaataaacacatccagaagcaatttatcgatagaaccgtagtgaaacgatacacagct
cttttagagggtgaaatagacggtaaatctggcgatatcagcctgccgttgcgtggtgac
attacagacagaccaagacagctggtttgccataagcatggccgaaatgcagaaacctat
tgggaagcggtcagtagcaacaatggtaaaactaaggttcacctataccccaagacaggg
cgtacccatcagcttcgggtgcattgtgctcatccattaggccttggtttaccgattcgc
ggtgatgacttatacggatacaaacgcgagcgcttacacttacacgctggctacctaaag
ttgattcacccaacaaccggagaatggatggagtttgaagtaccgtcagaattctag
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