Vibrio cyclitrophicus: FAZ90_22135
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Entry
FAZ90_22135 CDS
T06393
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc00550
Peptidoglycan biosynthesis
vcc01100
Metabolic pathways
vcc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FAZ90_22135 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FAZ90_22135 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcc01011
]
FAZ90_22135 (mrdA)
Enzymes [BR:
vcc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
FAZ90_22135 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
FAZ90_22135 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QCI73689
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All DBs
Position
2:1571598..1573496
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AA seq
632 aa
AA seq
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MNHKRVKMRDHKSEVNLFRNRVIVAFLGIVIFTLVLIGNLYRLQVQNFESYQTRADGNRI
KVLPIAPTRGLIYDRNGVLLAENQLVYDLTMIPEQTDDVELMIEKLNKFIPLNEEQIARF
TKRFKNTRRFKSVTILENLTEEEIAKFSVHQYQFPGLSINTSLKRFYPSGEILTHVLGYV
AHINDSDLKKLEEQGKDANYQATTTIGKLGVERYYEDLLHGQKGYQEVEVNSRGRVVRTI
QYVPPVAGKDIVLNIDIELQKYVFEQLENRTGSAVILDPKDNSVLAMASSPSYDPNLFVD
GISSKNYQVLLNDPAHPLVNRTTLGVYPPASTVKPFMAVAGLQEHVISENTVRNDHGIWR
IPGSKSNSKAWRDWKRWGHGPVDVTQAIEESVDSFFYQTAFDLGIDRISTWMNRFGFGKP
TGIDIYEESNANMPTREWKMMRYRTPWYQGDTVPIGIGQGYWTSTPLQLAKATSVLVNHG
KVMPPHILRATLDHGEDFDTQQLVKSDSMPSITEVPDNIWDVPINAMRLVNHGSRGSGRR
AFKGTNYTSGGKSGTAQVFDLAKDQVYNSKKLATHLLDHALYTAFAPYEHPEYVATVVIE
HGNGGSKVGAPYIRKVLDYAFEHKSGQNKDHS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacaaacgcgtaaaaatgcgtgatcataaaagcgaagtaaatttattcagaaat
cgtgtcatcgtggcatttctcgggattgtgatcttcaccctcgtcttgattggaaatctt
tatagactccaagtccaaaattttgagagctaccaaactcgcgccgatggtaatcgaatc
aaagtactgccaatcgctccgactcgtgggctgatatacgaccgcaatggtgtgctattg
gctgaaaaccaactcgtctatgatttgacaatgattcctgaacaaacggatgacgttgag
ttgatgatcgaaaagctcaataagtttattcctctaaatgaggaacaaatcgctcgtttc
acaaagcgctttaagaacactcgccgttttaagtcggtaacaatactggaaaacctcaca
gaagaagaaatcgctaagttttctgttcatcaatatcaatttccgggtttatccatcaat
accagcctaaaacgtttttaccctagcggtgaaatactaactcatgttttagggtatgtt
gctcatatcaatgatagcgatctaaaaaagctagaagaacaaggtaaagacgctaactat
caagccactaccaccataggtaaactcggcgtggagcgatattacgaagacttactccac
ggacaaaaaggttatcaagaagttgaagtcaatagccgtggtcgtgttgtgagaacaatc
caatacgtcccccccgtcgcaggtaaagacatcgttctcaacatcgatatcgagttacaa
aagtacgtgttcgagcaactcgaaaatcgcactggtagtgctgtgattcttgatccgaaa
gacaacagtgttttagcgatggcatcgagtcctagttatgacccaaatctgtttgttgat
ggtatatcgagtaaaaactatcaagtattactgaacgatcctgctcatcccttggtgaat
cgcacaacgttaggcgtgtacccgcccgcctctacagttaaaccatttatggccgttgct
gggctacaagagcatgtcatttcagaaaataccgttcgtaatgatcatggtatatggcga
attccaggttctaaatccaattcgaaagcatggcgagattggaagcgttggggacatggc
cctgtcgatgtgacacaagcgattgaagaatcggttgattcattcttttatcaaaccgct
tttgatctgggcatcgatcgtatttcaacttggatgaatcgctttggctttggcaaacca
acaggaattgatatctatgaagagagtaacgccaatatgccgacacgtgagtggaaaatg
atgcgctatcgtacgccttggtatcaaggtgatacagttccaatcggtattggccagggc
tactggacttctacacctctacaattagctaaagcaacgtcagttttggttaatcacggt
aaagtcatgcctccccatattttacgagcaacgttagatcacggagaagattttgacacg
caacaacttgttaaatctgattcaatgccgtctatcactgaggtgccagataatatatgg
gatgtgccgatcaacgcaatgcgactcgtaaaccacggtagtagaggcagcggcagacgt
gcatttaagggaactaattatactagtggtgggaaatcagggacggcacaggtgtttgat
ctggcgaaggatcaagtttacaactctaaaaagctcgcaacgcacctactcgaccacgct
ctttacacagcctttgcaccttatgaacaccctgaatatgtcgcaactgttgtaattgaa
catggtaacggtggttcaaaagtaggtgcgccttatatccgcaaagttctggattatgct
tttgagcataaaagtggtcagaacaaagatcactcctag
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