Vibrio cyclitrophicus: FAZ90_22655
Help
Entry
FAZ90_22655 CDS
T06393
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
vcc
Vibrio cyclitrophicus
Pathway
vcc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FAZ90_22655
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcc02000
]
FAZ90_22655
02044 Secretion system [BR:
vcc02044
]
FAZ90_22655
Transporters [BR:
vcc02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
FAZ90_22655
Secretion system [BR:
vcc02044
]
Type I secretion system
Adhesin protein transporter
FAZ90_22655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Rad17
AAA_22
AAA_23
PduV-EutP
AAA
DLIC
S1FA
AAA_28
ATPase_2
RsgA_GTPase
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QCI73785
LinkDB
All DBs
Position
2:1710861..1712999
Genome browser
AA seq
712 aa
AA seq
DB search
MSILVDFNNVPQRVLDFESSGYDERYSQSPLIRGLAYTLIALEWEGTPAILSDAFIPKSK
DGDSFTATIERLGYRCDVTKLKTLDNIDKHPHPCFIEIENLSAIFLGSKDGRLLLFDYTN
NNTIEYPMCKKPCLLIAISEYSRLFREPPPESQDRSNWIKYAFYRYNNELKSLIILSFVI
SILGALQPFFIMSVYNFALTSSSQATLYWLTLFAVIVGFSEYFFKKMRVNIIATSGKDLA
VHISQAVISKLLWLPYAMTSTAGVSSQLARLKDIDTFRRLVTAESTLSYFDMPFVIVFII
AIALMSGTAALVVMGGLILMLVFCVYSRYIYSQATSKSSRANAMVSYQWNEILRGIKTIQ
GLPLLRVVQSRFSASHMQSSNDAENVAVTNSKIQAAGGSLIQVIGTASIVTAVIGVMEGT
SDAGAMLATVILVWKALGPIMGIYNSISKFQSIKASSAQINNLMSMNDDKLTLEKSPPIR
LFQGSIVGSGVSHRYTGAATGLTNLGFKIPPSAKVVICGPTGCGKTTLISIIAGLEDRYQ
GAVSVDGYNIKQFNSYRYRTSINYIPFNLHIFEGSLETNFILHNGLIPTEKMQEMVSFFE
LDEWLPEGLATQLNVDKCKSLPNGIQQKLRLALGLGNCEQSLIIIDEPFNGAENENSQYF
NRLFSDKLLNKTVIFSTNDPGLIATSNMSLVLELDGNLKYFGLTDKYLNSLS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccttgtagacttcaataatgttccacaacgtgtcttggattttgaatctagc
ggatacgacgaacgttacagtcaatctcctcttattcgtggtttggcctacaccctgata
gcactcgaatgggaaggcactcctgctatactcagcgatgcttttattccaaaatctaaa
gacggcgacagctttacagcaaccatcgagcgccttgggtatcgctgtgatgtgaccaag
ctaaagacactcgataatatcgataagcaccctcatccatgctttattgaaatagagaat
ctaagtgcgattttcttaggctccaaagatggaaggctgctgttgtttgattacacaaac
aacaacaccattgaatacccaatgtgtaaaaagccctgtttactgattgctattagtgaa
tattctcgtctgttccgagaaccaccaccggaatctcaagacagaagtaattggattaaa
tacgctttttatcgttacaacaatgaactcaaaagcctgattatcttgagcttcgtgatc
agtattctaggtgcgttgcagccgttctttattatgagcgtgtataacttcgctcttact
tctagctctcaagcaacactctattggctaaccttatttgctgtgattgttggcttctcg
gagtatttctttaagaagatgcgagtcaacatcattgccacctccggtaaagatctcgcg
gtacacatatcccaagccgtaatatcgaagcttctttggttgccgtacgcgatgacatca
accgcaggggtctcgtcacaattggctcgtttgaaagatatcgataccttccgacgctta
gtgacagcagaatcgaccctcagctactttgatatgccgtttgtgattgtgtttatcatc
gcgatagccctgatgtctggcacagctgctctcgtggtaatgggcggcttaatattgatg
ttggtgttctgtgtttactcacgctatatctactcgcaagccacatctaaaagctcgcgc
gccaatgcgatggtctcgtaccaatggaatgaaatcctgcgtggtatcaagactatccaa
gggctacctttacttcgtgtcgttcaatctcgatttagtgcctcacatatgcaaagttcc
aacgatgccgagaatgttgccgtgactaacagtaagattcaggccgctggcggcagtttg
atacaggtgattggtactgcaagtattgtgaccgctgtaatcggtgtaatggaaggcact
tctgacgcgggtgccatgttagccaccgttattttggtttggaaagcattaggcccgatc
atgggtatctataattcaatttctaagtttcaatccataaaggcgtcatcggcacaaatc
aacaatttaatgtcgatgaatgatgacaagctgactttggagaagagcccacctattcgc
ctgttccaaggcagtattgtgggcagcggtgtaagtcatcgttacacaggcgcagcaacc
ggcttaaccaacttggggttcaagatacccccaagcgcaaaagtcgtcatttgtggccca
actggctgtggaaaaacgacgctaatttccatcattgcggggctagaagatcgctatcag
ggcgcagtgtctgtcgatggttacaacatcaagcagttcaacagctaccgctatcgcaca
tcgataaactacatcccttttaatttacatattttcgaaggttcgctagaaaccaacttc
attctgcataacggactcattccaacagagaagatgcaagagatggtgagcttcttcgaa
ttagatgaatggctcccggaaggtttagctactcagttaaacgtggacaaatgcaaaagt
cttcccaacggcattcagcaaaagctgcgtttagcgcttggtttaggtaactgtgagcaa
tctctgatcatcattgatgaaccgttcaacggagcggaaaatgaaaactcgcagtatttt
aaccgcttgttcagcgataagttgttgaacaaaacagtcattttttcaaccaatgacccc
ggtttgatcgccacttccaacatgagtttggttctggaactagatggcaatttaaaatat
tttggcttaacagacaaatacttaaacagtttaagttaa
DBGET
integrated database retrieval system
