Vanessa cardui (painted lady): 124529647
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Entry
124529647 CDS
T09161
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124529647
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124529647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
ResIII
HEAT_ECM29
TPR_Trm732_C
HEAT_EF3_N
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
124529647
NCBI-ProteinID:
XP_046959425
LinkDB
All DBs
Position
5:719795..747363
Genome browser
AA seq
1900 aa
AA seq
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MTSRLDRLFVLLEAGAGAATRRAAARQLGEVQKARPEELHRLLARLMKHLRSPAWETRNA
ATQAVGAILSNVPEWHPPLMTVVKEEESEPDDNGRLRCETFDIERVLEHGAHLMGSEGHE
YDMDEESLSASDLKESLAKQRQQLNARLGLDVACSLGVDLSGMYTNEDLCPVKTPPKVEV
TRRPVQELVACKGLSSREMNLAKRRARAAFSKQKSRDCDDGASAAPLAPATPAGPAPPSP
LEPERKKMKTEPVDECLGEVAFAVPRRDGSWGEGARWPLEAWCSALQAQLFSAAWEARHG
AAGALRELLRARIATSAGQRAGMTVQQMEDAHQEWLEDMSLRLLCVLALDRFGDFVSDQV
VAPVRETCAQTLGVALAQLRAARVRLVAERAAALARQPQWEARHGALLAFKYLLAARQQL
AVECGALELLTAGLEDGAEDVSGAAAGALAPAATALAAARPECLARLAGRLWRLLRDQDD
LAAPAHAYMALLAELMALPAAASELHPIDLTDVLPRLWPYLDHSTSSVRKATLQTLRTLT
RPLVTAGTNGQTNGNTESCETECDTSSTKCEKAGDDTKDTSEVKNCEVKCDNGENGQYLN
WTPELLQEAMRHIYQRVLFEHVHEIQEIAVQVWENILRHASLGTVLVATCPLLALWLCLA
MQPARLPLEPTLLLHPPPKERRARGGGGEAGDPEGELRAGQKWYLGGAESQPAALRDANV
TRARVLAADMLGYLSCYLVQPAPGIEYKAEDESPIDCYVKVMVVYLRSGSALQRLVAGLV
VAAWARRSRRHDRFPTDTQDENNTNEIQNGMSKLASPLLVTTLHTALNQNLYYDEVALNC
NRILQEARDLLAMMKHYKLPVDNEEFNNIMRLEQVSAMTTTTQPLVAALKTKRVASSLEE
RRAALAAAVAACARDQAALNVAVQAALSGAVAHMGALPERLNPVVRPLMDSVKRECSEEL
QRSSARTLAALLAQLVRREPCPNNKVLVNLKAFLRCDPEYTPRISLENSEDANGDSGSGD
SGAESKADVHSSHGPTLDKYNGILTLREQHRSAERIVPRRGRPPAAHNAHNAQNAHNAHS
ELGLEQLLPHEDEARKLLRIQRRGATMALTSLTEYFGEELPEKLPKLWEFITQPFEKVMT
DAELESLEEEAGEELVSRLQVVEAVSAHVCGALWARVAGGARACVALTRARHTALRHMAA
RALAALAARDPHAVMQTVVTEVIEALSDVRSERVRCGAAEALARAVDALQLQLVPYIALL
VVPLLGRMSDHNEAVRMMSTRCFATLIQLMPLDGAIPEPAGLSQELRERRQRDKHFLEQL
FNPKFIKDYKIPVPVSAELRSYQQAGVNWLRFLNEYKLHGVLCDDMGLGKTLQSIVVVAG
SHHERQARALPALPSLVVCPPTLTGHWVFEVNKFIPSKFLKPLQYVGPPVERERLRTHVQ
FYNLIVASYDIVRKDIEFFSSIKWNYCILDEGHVIKNGKTKAFKAIKQLVANHRLILSGT
PIQNNVLELWSLFDFLMPGLLGTERQFTARYSRPILAARDPRASPHHLQAGALACEALHR
QVLPFLLRRVKEDVLRELPPKITQDYYCDLSPLQRRLYEHFSREHMPQDISNTSAHTHVF
QALHYLQNVCNHPKLVLMAEHPEAARVARQLAAQGSSLDDIEHGAKLPALKQLLLDCGIG
TSATVGESGAVVSQHRALIFCQLKKMLNIVERDLLQKHLPSVTYLRLDGSVPPHQRHAIV
TRFNTDVSIDVLLLTTAVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKRVVN
VYRLITRDTLEEKIMGLQKFKLMTANTVISSENAAMETMGTDQLLDLFQLSSGPAPSTSQ
APATGAKSLIETLPDLWDDKQYEEEYDMTNFVKNLKKMKT
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacggctagatcggttgttcgtgcttttggaggcgggcgccggtgccgccaca
cggcgggccgcggcccgtcagctcggcgaggtgcagaaagcccgtccggaggaactgcac
cgtctgctcgctcgtcttatgaagcatctgcgctcgcctgcatgggagacgagaaatgcg
gccacgcaggccgttggagcgattttgtcaaatgttccagaatggcatccaccacttatg
accgttgtaaaagaagaggaatcggaaccagatgacaacggacgactgcgttgtgaaaca
ttcgacatagaacgcgtcctcgaacacggcgctcacctcatgggatccgagggacacgaa
tatgacatggacgaagaatcgctgtcggcttcagacctgaaggagagtttggcgaagcaa
aggcagcaactaaacgcacggttagggttagacgttgcgtgctcgttgggagtggatttg
agtgggatgtacaccaacgaagacctttgtcccgtgaagacacccccgaaggttgaggtg
acaaggcgtccggtgcaggagctagtcgcctgcaagggcttaagttcgcgcgaaatgaac
ctcgccaagcgccgcgcgcgcgccgccttcagcaagcaaaagtcacgcgactgcgacgac
ggcgcgtccgccgcgcccctcgcgcccgccacgcccgccggccccgcgccgccctccccg
ctcgagccggagcggaagaagatgaagaccgagcccgtcgatgaatgtctgggtgaggtc
gcatttgcggtccctcgtcgtgacggctcgtggggtgaaggcgcgcgttggcctctggag
gcgtggtgcagcgcactgcaggctcagctgttcagcgccgcctgggaggcgaggcatggc
gcggccggcgccctgcgcgagcttctgcgagccagaatagcgacctccgcggggcagcgc
gctggcatgaccgtgcagcagatggaggatgcccatcaggagtggctggaggatatgtcg
ctgcggttgctctgcgtgctcgcgctggatagattcggcgacttcgtatcggatcaggtg
gtggcgccggtgcgcgagacgtgcgcgcagacgctgggcgtggcgctggcgcagctgcgg
gcggcgcgcgtgcgcctcgtggccgagcgcgcggcggcgctggcgcggcagccgcagtgg
gaggcccgccacggcgcgctgctggccttcaagtacctgctggccgcccgccagcagctg
gccgtggagtgcggcgcgctggagctgctgacggcggggctggaggacggcgccgaggac
gtgtcgggcgcggcggcgggcgcgctggcgccggcggccacggcgctggcggcggcgcgg
cccgagtgcctggcgcgcctggcgggccgcctgtggcgcctgctgcgcgaccaggacgac
ctggcggcgcccgcgcacgcctacatggcgctgctggccgagctcatggcgctgccggcc
gccgcctccgagctgcatcccatcgacctgacagacgtcctgccgaggctgtggccgtac
ctcgatcactcgaccagctccgtgcgaaaagcgacgctgcaaactttgcgcactctcacg
cgacctctagtcacggctggcactaatggtcagaccaacggcaacaccgaaagttgtgaa
accgagtgcgacacgagtagcacaaaatgtgaaaaggcaggtgacgataccaaggacaca
agtgaagtgaaaaactgtgaggtgaagtgtgataacggtgaaaacggtcagtacctgaat
tggacgccagagttgctgcaagaggctatgagacacatatatcagcgggtactcttcgag
catgtacacgagatacaagagattgctgtacaggtgtgggagaacatcctgcggcacgcg
tcgctgggcaccgtgctggtggccacgtgtccgctgctggcgctgtggctgtgcctcgcc
atgcagcccgcccgcctgccgctggagcccacgctgctgctgcacccgccgcccaaggag
cggcgcgctcgtggcggcgggggcgaggcgggtgatccggagggcgagctgcgcgcggga
cagaagtggtacctgggcggcgccgagagccagcctgccgcactgcgtgacgccaacgtc
acgcgcgcgcgcgtgctggccgccgacatgctgggttacctatcctgctatctcgtccag
ccggcgcccggcatcgagtacaaggcagaggatgagagtccgattgattgctacgtaaag
gtgatggtagtgtacctgcgctcgggcagcgcgctgcagcggctggtggccgggctggtg
gtggcggcgtgggcgcgccgcagccgccgacacgaccgcttcccgaccgacacgcaggat
gagaacaatacgaatgaaatacaaaacggtatgtcgaagctggcgtcacctctcctagtc
acgaccctgcacaccgctttgaaccaaaacctgtattacgatgaagtcgccttgaattgt
aatcgaatattgcaagaagcacgtgatttactggctatgatgaagcactacaagctaccc
gtggataatgaagaattcaacaatatcatgaggcttgaacaggtgtcggcgatgacgacg
acgacgcagccgctggtggcggcgctgaagaccaagcgcgtggccagctcgctggaggag
cgccgcgccgcgctggccgccgccgtggccgcctgcgcgcgcgaccaggccgcgctcaac
gtggccgtgcaggcggcgctgagcggcgcggtggcgcacatgggcgcgctgcccgagcgc
ctcaaccccgtggtgcggccgctcatggacagcgtgaagcgcgagtgctccgaggagctg
cagcgcagctcggcgcgcacgctggccgcgctgctggcgcagctcgtgcgccgcgagccc
tgccccaacaacaaggtgctcgtcaacctcaaggcgttcctcagatgtgatcctgaatac
acacctcgtatatcactcgagaactctgaagacgcaaacggcgattcgggcagtggtgac
agcggcgccgagagcaaggccgacgtgcattctagccatggacccacattggataagtat
aacggtatcctcacactacgagagcaacatcgcagcgcagagcggatagtgccgcgccgc
ggccgcccgcccgccgcgcacaacgcgcacaacgcgcagaacgcgcacaacgcgcacagc
gaactgggactcgaacaactactgccgcacgaagatgaggcacgaaagctactcagaata
cagagacggggcgccacaatggctctcactagtctaactgaatatttcggcgaggagctc
ccagagaaattgcctaagctatgggagtttatcacgcaaccattcgaaaaagtgatgact
gatgctgaattggaaagtttggaagaggaggccggcgaggagctggtgtcgcgcctgcag
gtggtggaggcggtgagcgcgcacgtgtgcggcgcgctgtgggcgcgcgtggcgggcggc
gcgcgcgcgtgcgtggcgctcacgcgcgcgcgacacacggcgctgcgccacatggcggcg
cgcgcgctggccgcgctcgccgcgcgcgacccgcacgccgtcatgcagaccgtcgtcacc
gaggtgatcgaggcgctgtcggacgtgcgcagcgagcgcgtgcgctgcggcgcggcggag
gcgctggcgcgcgccgtggacgcgctgcagctgcagctcgtgccctacatcgcgctgctc
gtcgtgccgctgctggggcgtatgagcgaccacaacgaggcggtccgcatgatgtcgacg
cgttgctttgccactttgattcagctcatgccgctcgacggcgccattccggagcccgcg
ggactctcgcaggagcttcgagagagacgacagcgagataaacattttctggaacagctt
ttcaaccccaagttcatcaaggattataaaatacctgttcccgtctccgctgaactgaga
agctatcagcaggccggcgtgaactggctgcggttcctgaacgagtacaagctgcacggc
gtgctgtgcgacgacatggggctgggcaagacgctgcagtccatcgtggtggtggcgggc
tcgcaccacgagcgccaggcgcgcgcgctgcccgcgctgccctcgctcgtcgtgtgcccg
cccacgctcaccggtcattgggtgtttgaagtgaacaagtttataccgtcaaaatttttg
aaacctcttcaatacgttggaccgcccgtggagcgtgaacgattacggactcacgtacaa
ttctacaacctcatcgtggcctcatacgacatagtgcggaaggatatagaattcttcagc
agcattaaatggaattactgtatattggacgagggtcatgtcatcaagaacggaaaaacg
aaagcgttcaaggcgataaagcagctagtagcaaatcatcggttgatcctatcaggaacg
cctattcagaacaacgtgctggagctgtggtcgctgttcgacttcttgatgcccgggctg
ctgggcacggagcgccagttcacggcgcgctactcgcgccccatcctcgccgcccgcgac
ccgcgcgcctcgccgcaccacctgcaggccggcgcgctcgcctgcgaggctctgcaccga
caggtactgcccttcctactgcgtcgtgtgaaggaggacgtgctacgggagcttccgccg
aagatcacccaggactactactgcgacctgagcccgctgcagcgtcgtctctacgagcac
ttctcgcgcgagcacatgccgcaagacatttccaacacctccgcgcacactcacgtattc
caggcgctgcattacctgcagaacgtgtgcaaccatcccaaactagtgctaatggcggag
cacccggaggcggctcgagtggcgcgacagctcgccgcgcagggctcgtcgctcgacgac
atcgagcacggggccaagctgccagcacttaaacagcttctgcttgattgcggtattgga
acatcagcaaccgtcggcgagtccggcgcggtcgtgtcacagcaccgagcgctgatcttc
tgccagctaaagaagatgctgaacatcgtggagcgtgacttgcttcagaagcacctgccg
tccgtcacgtacttgcggctggacggcagcgtgcctccgcaccaacgacacgctatcgtt
acgcgtttcaacacggatgtgtccattgacgtgctactattgactactgcagtcggcggt
ttgggtttgaacctcaccggtgccgatacggttatattcgtggaacacgactggaatccc
atgaaggatcttcaggccatggaccgcgctcaccgaatcgggcagaaacgagttgtcaac
gtgtatcgactcatcactagggacacactcgaggagaagatcatgggcttgcaaaaattc
aaactgatgactgcaaacacggtgataagtagtgaaaacgcagcaatggagaccatgggg
acggatcagctgctcgatcttttccaactgtccagcggccccgcgccctccacctcgcag
gcccccgccaccggtgccaagtccctcatagaaacccttccagacctctgggacgataaa
cagtacgaagaagagtatgatatgacgaattttgtcaagaatctgaaaaaaatgaaaaca
taa
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