Vanessa cardui (painted lady): 124529904
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Entry
124529904 CDS
T09161
Name
(RefSeq) WD repeat-containing protein 3
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124529904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcd03009
]
124529904
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124529904
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Utp12
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_TEP1_C
ASA1
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_DCAF4
NBCH_WD40
CFAP251_N
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_ACSF4
PAC11
WD40_like
WDR54
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_MIP2
Beta-prop_RIG_1st
Utp21
Motif
Other DBs
NCBI-GeneID:
124529904
NCBI-ProteinID:
XP_046959797
LinkDB
All DBs
Position
5:11147873..11156762
Genome browser
AA seq
916 aa
AA seq
DB search
MGLTKQYLRYAPSGTFNVISSADCNSSHVTLNGVSGRYIAVGACEHVIIWDMRLGEKAQV
IPGENVVVSQIAASPTGNHMAVGYVDGNINVFELINNEVVCVFAGHKSAVTCLQYDEQGH
RIISGSKDTEVILWDVVSETGIARFSGHKGDITSAIFINGRNCIISSSKDTFIKFWDIET
KHCFKTLGGHQMEVWSVALLKEERYLVTGSMDQELRVWKLNWTDKIKEEDKLTQQLEIVK
LEDTDNTEDTSVLQCHQVGTLIRGGRGRVVGLSTDPGQSVLACHGTDSLLELFAFCSDEE
AKVRMNKRVKKQRKKLSKQKESGDVDPETIDVSEILTLSDEVRRLSSVKLSAKIKSSCLL
MGTTGELRVGVTLATNTVELHSLNMAEGNEVKCLKQITQPGHQKEPRCIAISSDNLALLS
ASVDSIKLWNRASQACVRSVATGGARPTSACFAPGDRHALVARADGAVLLLDAAAARVLE
TVPAHERDCCVVALTPDMRGCYTGGGDKTVKLWQFELIPDTTTDSKAKVLSLLHTRTLEL
EEAVTAVSVSPNNKFIAVALLDSTVKIFFLDTFKFYLSLYGHKLPVQCLDFSYDSCLVAT
GSADRNVKVWGVDFGDCHKSIFAHNDSVTALRFVPSTHYFFTGSKDGKVKQWDADTYDNI
ITLNGHAGACADVCVGAGGLHAASCGADGALRLYARTDEPLVLGDRDDDDEGLATGERHA
PVPGLPGLVMPTKKTIGAEKAADSLVECLSLCAEHDANGPGAPPPALMAAYGCTTSDDFL
LETVKRIRSSELEEALLLLPFEAACGVVRALPALLERGDHAELLCRLATFLLRVHRAPLL
AHRALRKHLIQIQAKATLRLTELRDMVGFNLHALQWLRREQEAAQGEQLFREAAGERSRR
QRRQRRALKRPIVAVT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcaccaaacaatatttacgctatgctcctagtggtacttttaatgttatatct
agtgctgattgtaacagttctcatgtgactttaaacggagttagtggaagatatattgcg
gttggagcgtgtgaacatgtaattatttgggatatgagattgggagaaaaggctcaagta
atacctggagaaaatgtagtggtgtcccaaatagccgccagtccgaccggcaaccacatg
gctgtgggctacgtagatggcaatataaatgtgtttgagttgatcaacaatgaagttgta
tgtgtatttgcgggacacaagtctgcagtgacatgcttacagtatgatgaacaaggccat
aggattatatcaggttctaaagacactgaagtaatcctttgggatgttgtgtctgagact
ggtatagctcgatttagtggacacaaaggtgacatcacaagtgctatttttataaatgga
agaaactgcattataagctcatcgaaggacacatttataaagttttgggatattgaaaca
aagcattgttttaaaactctgggaggtcaccagatggaggtgtggtctgtggcacttctg
aaggaggaaaggtatttggtaacaggcagcatggatcaagagttgcgagtatggaaactt
aattggactgataaaatcaaagaagaagataaattaacacagcaacttgaaattgttaaa
ttagaagacacagacaatactgaggatacttcagttttacagtgccatcaagttggaaca
cttattcgtggaggcagaggcagagtagtaggcctatcaacggatcctggacaaagtgtt
ttagcatgtcacggaacagattccttgttagagctgtttgcattttgttcggatgaagag
gctaaagtcagaatgaataaaagagttaaaaaacagagaaaaaaattgagcaagcaaaaa
gaaagtggtgatgtagatccagagacaatagacgtatcagaaatcctcacattatcagat
gaagtgcgacgactgagttctgtgaaactgtcggccaagattaagtcctcttgtctcttg
atggggaccacgggtgagctgcgtgtgggggtgacactggccactaacactgtggagttg
cacagcttaaatatggccgaagggaatgaagttaaatgtttgaagcaaataactcaaccg
ggccaccaaaaggaaccaagatgtattgcaataagctcagacaatctagccttattgtcc
gcctccgttgactccattaaactttggaacagagcgagccaggcgtgcgtgcgcagcgtg
gcgacgggcggcgcgcggcccacgagcgcgtgcttcgcgccgggcgaccggcacgcgctg
gtggcgcgcgcggacggcgccgtgctgctgctggacgcggccgccgcgcgcgtgctggag
accgtgccggcgcacgagcgcgactgctgcgtcgtcgcgctcacgcccgacatgcgagga
tgctacactggcggtggagataaaacggtcaagttgtggcagtttgaacttattcccgac
actacaaccgattcaaaagccaaggtactgtcactcctgcacacgcggacattggaactg
gaggaagctgtcacggcagtcagcgtcagtccgaacaacaagttcattgcggtggcccta
ctcgactccacggtcaagatattcttcctcgacacattcaaattctacctgtccctgtac
gggcacaagctgccggtgcagtgcttggacttcagctacgactcgtgcctggtggcgacg
ggctccgccgaccgcaacgtgaaggtgtggggcgtggacttcggcgactgccacaagtcc
atattcgcgcacaacgactcggtcacggcgctgcggttcgtgccctccacgcactacttc
ttcacgggctccaaggacggcaaagtcaagcagtgggacgccgacacctacgacaacatc
atcacgctcaatggccacgcgggcgcgtgcgcggacgtgtgcgtgggcgcgggcgggctg
cacgccgcgtcgtgcggcgccgacggcgcgctgcgcctctacgcgcgcaccgacgagccg
ctcgtgctgggcgaccgcgacgacgacgacgaggggctggccaccggcgagcgacacgcg
ccggttcccggtctcccgggcctcgttatgccgacgaagaaaaccatcggtgctgaaaaa
gcggcggattcgctagtggagtgcctgtcgctgtgtgcggagcatgacgcgaacgggccc
ggagcgccgccgcccgcgcttatggcggcctacggctgcaccacgtctgatgacttcctg
ttggagactgtcaagaggatacgatccagcgagctggaggaggcgctgctgctgctgccg
ttcgaggcggcgtgcggcgtggtgcgcgcgctgccggcgctgctggagcgcggcgaccac
gcggagctgctgtgccggctcgcgacgttcctgctgcgcgtgcaccgcgcgccgctgctg
gcgcaccgcgcgctgcgcaagcacctcatacagatacaggccaaggccacgctgcgcctc
acagagctgcgggacatggtgggcttcaacttgcacgcgctgcagtggctgcggcgcgag
caggaggcggcgcagggcgagcagctgttccgcgaggcggcgggcgagcgctcgcgccga
cagcgccgccagcgacgcgcgctcaagcgccccatcgtcgccgtcacctag
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