KEGG   Vanessa cardui (painted lady): 124529904
Entry
124529904         CDS       T09161                                 
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    124529904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vcd03009]
    124529904
Ribosome biogenesis [BR:vcd03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    124529904
SSDB
Motif
Pfam: Beta-prop_WDR3_2nd Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_EML Utp12 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_TEP1_C ASA1 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_DCAF4 NBCH_WD40 CFAP251_N Beta-prop_SPT8 PEP5_VPS11_N Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_ACSF4 PAC11 WD40_like WDR54 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_MIP2 Beta-prop_RIG_1st Utp21
Other DBs
NCBI-GeneID: 124529904
NCBI-ProteinID: XP_046959797
LinkDB
Position
5:11147873..11156762
AA seq 916 aa
MGLTKQYLRYAPSGTFNVISSADCNSSHVTLNGVSGRYIAVGACEHVIIWDMRLGEKAQV
IPGENVVVSQIAASPTGNHMAVGYVDGNINVFELINNEVVCVFAGHKSAVTCLQYDEQGH
RIISGSKDTEVILWDVVSETGIARFSGHKGDITSAIFINGRNCIISSSKDTFIKFWDIET
KHCFKTLGGHQMEVWSVALLKEERYLVTGSMDQELRVWKLNWTDKIKEEDKLTQQLEIVK
LEDTDNTEDTSVLQCHQVGTLIRGGRGRVVGLSTDPGQSVLACHGTDSLLELFAFCSDEE
AKVRMNKRVKKQRKKLSKQKESGDVDPETIDVSEILTLSDEVRRLSSVKLSAKIKSSCLL
MGTTGELRVGVTLATNTVELHSLNMAEGNEVKCLKQITQPGHQKEPRCIAISSDNLALLS
ASVDSIKLWNRASQACVRSVATGGARPTSACFAPGDRHALVARADGAVLLLDAAAARVLE
TVPAHERDCCVVALTPDMRGCYTGGGDKTVKLWQFELIPDTTTDSKAKVLSLLHTRTLEL
EEAVTAVSVSPNNKFIAVALLDSTVKIFFLDTFKFYLSLYGHKLPVQCLDFSYDSCLVAT
GSADRNVKVWGVDFGDCHKSIFAHNDSVTALRFVPSTHYFFTGSKDGKVKQWDADTYDNI
ITLNGHAGACADVCVGAGGLHAASCGADGALRLYARTDEPLVLGDRDDDDEGLATGERHA
PVPGLPGLVMPTKKTIGAEKAADSLVECLSLCAEHDANGPGAPPPALMAAYGCTTSDDFL
LETVKRIRSSELEEALLLLPFEAACGVVRALPALLERGDHAELLCRLATFLLRVHRAPLL
AHRALRKHLIQIQAKATLRLTELRDMVGFNLHALQWLRREQEAAQGEQLFREAAGERSRR
QRRQRRALKRPIVAVT
NT seq 2751 nt   +upstreamnt  +downstreamnt
atgggtctcaccaaacaatatttacgctatgctcctagtggtacttttaatgttatatct
agtgctgattgtaacagttctcatgtgactttaaacggagttagtggaagatatattgcg
gttggagcgtgtgaacatgtaattatttgggatatgagattgggagaaaaggctcaagta
atacctggagaaaatgtagtggtgtcccaaatagccgccagtccgaccggcaaccacatg
gctgtgggctacgtagatggcaatataaatgtgtttgagttgatcaacaatgaagttgta
tgtgtatttgcgggacacaagtctgcagtgacatgcttacagtatgatgaacaaggccat
aggattatatcaggttctaaagacactgaagtaatcctttgggatgttgtgtctgagact
ggtatagctcgatttagtggacacaaaggtgacatcacaagtgctatttttataaatgga
agaaactgcattataagctcatcgaaggacacatttataaagttttgggatattgaaaca
aagcattgttttaaaactctgggaggtcaccagatggaggtgtggtctgtggcacttctg
aaggaggaaaggtatttggtaacaggcagcatggatcaagagttgcgagtatggaaactt
aattggactgataaaatcaaagaagaagataaattaacacagcaacttgaaattgttaaa
ttagaagacacagacaatactgaggatacttcagttttacagtgccatcaagttggaaca
cttattcgtggaggcagaggcagagtagtaggcctatcaacggatcctggacaaagtgtt
ttagcatgtcacggaacagattccttgttagagctgtttgcattttgttcggatgaagag
gctaaagtcagaatgaataaaagagttaaaaaacagagaaaaaaattgagcaagcaaaaa
gaaagtggtgatgtagatccagagacaatagacgtatcagaaatcctcacattatcagat
gaagtgcgacgactgagttctgtgaaactgtcggccaagattaagtcctcttgtctcttg
atggggaccacgggtgagctgcgtgtgggggtgacactggccactaacactgtggagttg
cacagcttaaatatggccgaagggaatgaagttaaatgtttgaagcaaataactcaaccg
ggccaccaaaaggaaccaagatgtattgcaataagctcagacaatctagccttattgtcc
gcctccgttgactccattaaactttggaacagagcgagccaggcgtgcgtgcgcagcgtg
gcgacgggcggcgcgcggcccacgagcgcgtgcttcgcgccgggcgaccggcacgcgctg
gtggcgcgcgcggacggcgccgtgctgctgctggacgcggccgccgcgcgcgtgctggag
accgtgccggcgcacgagcgcgactgctgcgtcgtcgcgctcacgcccgacatgcgagga
tgctacactggcggtggagataaaacggtcaagttgtggcagtttgaacttattcccgac
actacaaccgattcaaaagccaaggtactgtcactcctgcacacgcggacattggaactg
gaggaagctgtcacggcagtcagcgtcagtccgaacaacaagttcattgcggtggcccta
ctcgactccacggtcaagatattcttcctcgacacattcaaattctacctgtccctgtac
gggcacaagctgccggtgcagtgcttggacttcagctacgactcgtgcctggtggcgacg
ggctccgccgaccgcaacgtgaaggtgtggggcgtggacttcggcgactgccacaagtcc
atattcgcgcacaacgactcggtcacggcgctgcggttcgtgccctccacgcactacttc
ttcacgggctccaaggacggcaaagtcaagcagtgggacgccgacacctacgacaacatc
atcacgctcaatggccacgcgggcgcgtgcgcggacgtgtgcgtgggcgcgggcgggctg
cacgccgcgtcgtgcggcgccgacggcgcgctgcgcctctacgcgcgcaccgacgagccg
ctcgtgctgggcgaccgcgacgacgacgacgaggggctggccaccggcgagcgacacgcg
ccggttcccggtctcccgggcctcgttatgccgacgaagaaaaccatcggtgctgaaaaa
gcggcggattcgctagtggagtgcctgtcgctgtgtgcggagcatgacgcgaacgggccc
ggagcgccgccgcccgcgcttatggcggcctacggctgcaccacgtctgatgacttcctg
ttggagactgtcaagaggatacgatccagcgagctggaggaggcgctgctgctgctgccg
ttcgaggcggcgtgcggcgtggtgcgcgcgctgccggcgctgctggagcgcggcgaccac
gcggagctgctgtgccggctcgcgacgttcctgctgcgcgtgcaccgcgcgccgctgctg
gcgcaccgcgcgctgcgcaagcacctcatacagatacaggccaaggccacgctgcgcctc
acagagctgcgggacatggtgggcttcaacttgcacgcgctgcagtggctgcggcgcgag
caggaggcggcgcagggcgagcagctgttccgcgaggcggcgggcgagcgctcgcgccga
cagcgccgccagcgacgcgcgctcaagcgccccatcgtcgccgtcacctag

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