Vanessa cardui (painted lady): 124529987
Help
Entry
124529987 CDS
T09161
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124529987
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcd02000
]
124529987
Transporters [BR:
vcd02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124529987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
RsgA_GTPase
AAA_23
AAA_22
AAA_29
MukB
CMI2B-like
Motif
Other DBs
NCBI-GeneID:
124529987
NCBI-ProteinID:
XP_046959913
LinkDB
All DBs
Position
5:8367924..8383855
Genome browser
AA seq
1731 aa
AA seq
DB search
MKVRKNAKTAEAWTKFRLLMWKNFLQQWRHRIQTFLELFLPVLTMTLILILRQQVEPVKH
STIRYPPLNAYTLNFSVPVMSGFNFSELSIAYSPQSPVLDDVIRNAMANLLTYNIKQFIS
IIQQAPDFPDIPIDIPPDILENINSTLINEIAKRLVRVKGYEKASELRGIYKTEQVTREV
IAAVEFDDSLLGTNFLPKNLSYALRFPERPRLNSFHRLGSRSWYTDVVFPYMELSGPRFP
YSWEGGNEPGYVNEMFIAIQNAISMELISRLTSINLENFKVHIQRYPHAPYINDVAVQAL
SLIFPMFFMLSFSYTAVNIIRVITLEKELQLKETMKIMGLPTWLHWTAWFCKQFIFLFIT
SAFLMVILKVNWFTSEQGFSDYAVFTNTPWTVLYFYILLYLSCTICFCFMISGLFSKGST
AALFGGIIWFMSFIPAVLLGLDIEIPFAVQALSCFSINSAMSLGFQIMLSKENTGGMQWG
EFFTTHSVDSNRLLFGHVCIFLLVDAIMYMMIALYLEQVLPGPLGTPKPWYFLIQKSFWC
SPAHESDVYKIGNVTNDADTIKEKDPKGLEIGVKMSNLTKVYGKNIAVNNVSLNIYDNQI
TVLLGHNGAGKSTTIAMLTGNVEITRGNIWVAGFNMSTQAPQARSHIGLCPQHNVLFNEL
TVREHLEFFSKLKGYSGQELDEEIDNLIDRLEMQEKRHYLAEGLSGGQKRRLCVGIALSG
GARVVLLDEPTSGMDPASRRALWDLLQKEKKGRSLILTTHFMDEADFLGDRVAIMSSGSL
QCVGSPYFLKQHYGVGYTLVIIKKEQFQIEHCTALISKYIPGTVIKEDRGIEVTYNLPND
YSHVFEDMLNDLERKADIINFQDYGLVATTLEDVFMSVGSDVETHSISEDTTITADASDG
RASSADDLSLHHLDKSDDNATGFLLLWMHVSAVWFKLFLVWTRSWGILLLQILVPVIQIN
ISLGILEYLVSLQGSVIKRPLTLSQGFFATETLLSFNGSSWSSIGAIAKAGYEQLFNSFN
MDSMALNIVNDTSIDDYYLERTTDTDELGTLRNQLLIGATIDEDKAVAWFSNFGFHDVAT
SLATLHSALLKGLDPEANLNVSNYPLEATYSDNSNMQLMMSLVSMQIAVSIGNSLAIISA
VYVMFYIKERVSRAKLLQRAAGIQPAVMWASAFIFDWFWFQIVSVTIIISCAAFNVIGLS
NVIELGRLFLCLMIYGAAMLPLQYLFSLSFNGPALGFVITFFINVIFGLIGSQIVESLSM
LNNGIAADVLDIILPFFPLYSVVSSARLLNKVGLTKHTCLQSCDYLSLIAPDSECTLETL
CENFSKICCIPENPYFQWESPGILRYIICSLISGAVLWLILMIFEYNWIQRLMQRTKKSP
PMEESSIDADVVEEMKHAQLVDHKSSDIALVARGLTKYYKDNLAVDQISFTVSEAECFGL
LGVNGAGKTTTFKMLMGDETISNGDAFVSGYSVKQNITKVYENIGYCPQFDAVFGELTGR
ETLKLFSRFRGLKDCNSILYIETLAHALGFTKHLDKQVYQYSGGNKRKLSTAVSMLGRTR
LIFVDEPTTGVDPAAKRQVWRAIRAARRAGRAFVLTSHSMEECEALCSRLTIMVNGRFQC
LGSPQHLKNKYSEGFTLTIKIKMDSDSRRTAAERTEAVKNYVSAQYNNVKLMEEYQGIIT
YYLPDRSMPWSRMFGIMEQAKRELDVEDYSILQTTLEQIFLQFTKYQREEQ
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgagaaaaaatgctaaaacagcggaggcttggacgaagtttcgtttgttgatg
tggaagaatttcttacaacaatggcggcatcgaattcagacttttctagaattgtttcta
cctgtattaacgatgactctaatacttattttacgtcaacaagtagaaccagtaaaacac
tcaacaatccgatatccgcctttaaacgcttatacgttgaatttctcagtgcctgtaatg
tcgggttttaattttagtgaactgtctatagcatattcaccgcaaagtccagttttagat
gacgtaattcgaaatgcaatggcaaatcttttgacttacaatataaaacaatttatctca
ataattcaacaagcacctgactttcctgatatacctatagatatacctcctgacatatta
gaaaatataaatagtacacttattaatgagattgcaaaaaggcttgtgagagtaaaggga
tacgaaaaggcctcagagttgagaggtatttacaagaccgaacaagtaactcgagaggtc
atagcggcggtagaatttgatgatagcttattaggcacgaattttttaccgaaaaacttg
tcgtatgcgcttagatttccagaaagaccccgtttaaattcatttcatcgtttgggatcg
cgaagctggtacacagacgtcgtgtttccatatatggaattatctggaccaagatttcct
tattcttgggagggaggcaatgagccaggttacgtcaacgagatgtttattgcaatacag
aacgctatatcaatggagttaatttctcgtttgactagcataaatttggaaaatttcaaa
gttcatatccaaagatatcctcatgcgccttacatcaatgacgttgctgtgcaagcactg
agtttgatattcccaatgttcttcatgttgagtttcagctacacagctgttaacattata
cgcgttattaccttagagaaagaacttcaactcaaggaaactatgaaaataatgggcctt
cctacctggttacactggacagcctggttttgtaaacagttcatatttttgtttataaca
tccgcctttctcatggttatactaaaggtaaattggttcacgagtgagcaaggcttcagt
gactatgccgtttttactaacacaccctggaccgtcctatatttctacattcttttgtat
ttatcttgcaccatatgtttttgctttatgataagtggtttattctcaaaaggtagtacc
gcagcgttatttggaggcattatttggtttatgtcgtttatcccggctgttctgttagga
ttggacatagaaataccatttgctgtccaagctctttcgtgttttagtataaactctgct
atgtcgctcggctttcaaatcatgttaagcaaagaaaatacaggaggtatgcaatgggga
gaattttttacaacacattcggtggattcaaacagattgttatttggtcatgtttgtata
tttcttttggtggacgcaataatgtacatgatgatagcactttatttggaacaagttctg
ccaggcccgttaggaacgccgaaaccttggtatttcctaattcaaaagtccttctggtgt
tcgccagcgcatgaatcagatgtgtacaaaattggtaacgttactaatgatgctgatact
atcaaagagaaggatcctaaaggtttagaaattggagttaaaatgtcgaatctgacgaaa
gtttatggaaaaaatattgcagtcaataatgtcagtttaaacatttatgataatcaaatt
actgtcttgttgggacacaatggggctggcaaatctacaacgatcgcaatgttaacgggt
aacgtggaaataacaagagggaatatatgggtggcgggtttcaacatgtccacgcaagcg
ccccaagctcgcagtcacataggtctttgtccacaacacaatgtcctattcaatgaactt
acagtccgagaacatttagagttcttctcaaaactaaaaggatattctggccaagaactt
gacgaggaaatagataatctcatcgatagattagagatgcaggaaaagagacattacctt
gcggaagggttatctggtggtcaaaagcgacgtctgtgcgtgggaatagcgctaagtggt
ggcgcgcgagtcgtacttctcgatgaaccgacctctggtatggatcccgcctctaggcgc
gccctttgggatctgctacaaaaagaaaaaaaaggtcgttctttgattctcacaacacat
ttcatggacgaggctgacttcctcggtgaccgagtagcgataatgtccagtggtagtctg
caatgcgttggctctccttacttcctgaagcaacattatggtgtcggttatactcttgtg
attattaagaaagaacaattccaaattgaacattgtactgctctcattagcaaatacata
ccagggacggtgataaaagaagatcgcggcattgaggtcacttataatttaccaaatgat
tattcgcatgtgtttgaagacatgctcaatgatcttgaaaggaaagcagatatcataaat
ttccaggattacggcttagttgctacgacattggaagatgttttcatgtccgttggctct
gacgtagaaactcactcgatatccgaagacacgactataactgcagatgcatctgacggg
agagctagcagtgcagatgacttatccctacaccatttagacaaaagtgatgataatgca
accggctttctgttgctgtggatgcatgtcagtgctgtatggttcaagttgttcttggta
tggactcgttcatggggaattctgttgttacaaattctcgtacccgtgattcaaataaac
ataagtttgggcatattagaatatttagtgtcacttcagggatcagtgatcaaaaggccg
ctgactctttcacagggattttttgcgacggaaactttattaagttttaatggaagtagc
tggtcctcaataggtgccatagcaaaagcaggatatgagcaattgtttaatagttttaat
atggattctatggctcttaacatagtgaatgacacgagcattgatgactactatctggaa
aggacgacagatacagatgaattgggcacgctacgtaaccaacttttaattggcgccaca
attgatgaagataaggccgtagcttggtttagtaacttcggttttcacgacgtggctacc
tctttggctaccttgcattcagcattacttaaaggtctcgaccccgaagccaatctgaat
gtttccaattacccactagaagctacttacagtgataatagcaatatgcaattaatgatg
tctttggtgtccatgcaaattgctgttagtattggtaatagtcttgctatcatcagtgca
gtttacgtcatgttttatataaaggagcgagtttcgcgtgcaaaattgctacagcgagcg
gcgggtatacagccggcggttatgtgggcgtcggcattcatcttcgactggttctggttc
caaatagtttctgtgaccatcatcatctcctgcgcagctttcaacgtcataggattatct
aatgtcatcgaactagggcgtctgtttttgtgtttgatgatttacggagcagcgatgttg
ccactgcaatatttgttttcactttctttcaacggacctgctcttggatttgttataaca
tttttcatcaatgttatatttggtttaattggtagtcaaatagttgaatcactgtctatg
ctaaacaatgggattgcagcagatgtactagacatcattctacccttcttcccactttac
agtgtagtatcatctgcaaggttgttaaataaagtaggacttacgaagcacacctgcctg
caatcctgtgattacttgagtttaattgcgccggacagcgagtgtaccttggagacattg
tgtgaaaacttttcaaagatatgttgcattcctgaaaatccatactttcaatgggagagt
ccgggcatactacgctatatcatctgctcgctaatatccggtgctgtcttatggttgata
ttaatgatttttgaatataattggattcaaaggttaatgcaacgtacaaagaagtcaccg
ccaatggaagagtcttcaatagatgcagacgttgtggaagaaatgaaacacgcacagctc
gttgaccacaaatcttcagatattgcgctcgtcgctcgcggtttaactaaatattataag
gacaatctcgctgtggatcaaatttctttcaccgtcagcgaagctgaatgctttggtcta
ttaggagttaacggtgccggaaaaactacaactttcaagatgcttatgggagacgaaacc
atttctaatggagacgcttttgtcagtggttactccgttaaacagaatattacgaaagtt
tacgaaaatataggttactgtccacaatttgatgcagtattcggcgaattgacgggtcga
gaaaccttaaaattgttctcacggtttcgtgggctaaaagattgcaactcgatactatac
atagagacactcgcccacgctttaggatttaccaaacatcttgacaaacaggtttatcaa
tactcgggaggaaacaaacgcaaactgagcacagcggtgtcgatgctcggtcggacgcgg
ctcattttcgtggacgagccgacgacgggcgtggacccggccgccaagcgccaggtgtgg
cgcgccattagggccgcccgccgcgccggacgcgcgttcgtgctgacgtcacacagcatg
gaggagtgcgaggcgctctgctccaggctcaccatcatggtcaacggacgcttccagtgc
ctcggctcgccgcagcatcttaagaataaatactctgaaggttttactttgacgataaaa
ataaaaatggatagtgattcaagacgtactgcagctgagagaactgaagctgtaaagaat
tatgtcagcgctcagtataataatgtcaaactgatggaggaataccagggtatcattaca
tattacttgccagaccgcagcatgccttggtctagaatgtttggcatcatggagcaagca
aagagagaattagacgtcgaagattacagcatattacaaacaactttagaacaaattttc
cttcaatttaccaaatatcaacgtgaagaacaatag
DBGET
integrated database retrieval system
