Vanessa cardui (painted lady): 124529988
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Entry
124529988 CDS
T09161
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124529988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcd02000
]
124529988
Transporters [BR:
vcd02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124529988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
SMC_N
AAA_23
AAA_22
AAA_15
nSTAND3
AAA_29
SRP54
RsgA_GTPase
nSTAND1
Motif
Other DBs
NCBI-GeneID:
124529988
NCBI-ProteinID:
XP_046959914
LinkDB
All DBs
Position
5:complement(8385606..8420848)
Genome browser
AA seq
1698 aa
AA seq
DB search
MSSFEKLKLLIWKNFLLQRRHKWQTLFEIASPVIFSLFLILIRCLVDPQSKPDVSYSPFL
PTYFNISGRQLGNLTSAKREGTIAFSPENPLTRKVTEDAMAMVALDNLNGFIALFFDTKM
LPQPKGYNDSLALEAALTQPNVMNHILVGIQFDDSMTNATEWPDDIKVTLRFPAVMRTPM
LEHPLRISWRTNLLFPLFPQPGPREPDDMYGGKMPGYSPEMFLAVQHAVSQEIIKQKTGK
PINTKIYLQRLPQLSYRRDDLLVAMERFISMIIMMCFAYTFVNTVRVVTAEKEMQLKETM
TIMGLPSWLHWLAWFIKQFSFLLISVTLMVILFKIPFNSTEDGEGYAVLTFTPWSVLFFF
LTLFVIASLSFCFMVSVFFTRANTAASFMGLAWFSTYAAFMLTQMLYEDISLTTKLLLSL
ISNTAVGYALQMLIICEGTSRGLQWNEFFTPVSYHDQFQPGHVALMLILDSILYMLVAMY
VEKIRPGLYGVPLPWYFPFTKSFWCPNSKKVAALTNKDGVDQEYKNALLKVIHDEEPKGV
PMGINIENLTKVYRGRKRAVDNLNLRMYENEITVLLGHNGAGKTTTISMLTGMVPPSSGS
ATINGYDIVTETEQARKSIGICPQHNVLFPDLTVAEHIIFYSRLKGVHKSKINEEVDHFV
KLLELEEKRDVISKHLSGGQKRRLSVGAAMCGSSRVVLLDEPTSGLDPAARRSLWDLLQK
EKKGRTMILTTHFMDEADVLGDRIAIMSGGRLQCVGTPYFLKKHYGIGYKMTIVKSDHCV
VEDVTRFFKSYVPDVKENTNIGSELTYILPNDQVSKFPDMLKKFEEEKENLKVASYGLSV
TSLEEVFMKAGAEDNGLTSTKKHIYNNSYSDAAVVPMDMPRNNILDNEPIQKVRGWKLQR
NHIKAMFLKLAYNTIRNKLGAFIQIITPIINISISVWIARSWKFMSHLPPLELSLASGFR
KTQTLLSEGANLTENSIERRAMIAFKDYFKNSSDPTMTLTDVGRMDLAKFYLKLSAGEPA
RARYEALAGATFAPQRVTAWFSNYGYHDSAISLALANNALLGALAPGASLRVVNHPLPYS
IENLVKVMASGSSMGFQFAFNIGFCMAFVTSFLVLFVIKERTSGAKLLQRVSGVRPAVLW
TTALIWDWLWLLLVFFAIISTLAFFQENTLATPQELGRVLLVLIIFAFAMIPLHYLASFY
FEAAATGFSKMCFINIFSGCMPFLITEVLRLPEVGNPYYAHIFDWLFSPLPIYCISRSFR
DMSVSAFSLLACDALCAQFETIDNCTRHTVCNKLNVSVCCLDDDPFLRWSEPGIGRYLFT
MSLVGVIGFAVLLIKEYEVLNKVRYAGRAARAAGADEDADVAAERRRVQELPRERLAAHS
LVCRDLTKYYGDFCAVDNLTFAVRKGECFGLLGINGAGKTSTFRMLTGDARISCGDAYVH
GLSIKTHIQDVHRHIGYCPQFDALIENLTARETLKIFCLLRGIPVRVGSARAIQLAEILG
FIKHYDKKVHECSGGTKRKISTALALLGDSPLVFLDEPTTGMDPASKRLVWRSVSEAAAG
GRSVVLTSHSMEECEALCSRLTVMVNGRLYCLGPLQHLKNKFSQGYTLIIKCKAGPDRDS
NVARINQYVLDNFRDAKLIESYLGISTYYLDDRDLPWWSVFHLMEAARSLYSMEDYSVSQ
TTLEQVFLRFTRIQGQVD
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttttgaaaaattaaagctcttgatttggaaaaattttcttttgcaaagaagg
cacaagtggcaaacactctttgaaatagcatctcctgtgatattttctttatttttaata
ttaataagatgcctcgtcgatccacaatccaagccagatgtttcgtactcaccttttctc
ccaacatatttcaatatcagtggaagacagcttggaaatctcacatcagcaaaacgagaa
ggaacaatagcattttctccagaaaatccacttacaaggaaagtgacagaggatgccatg
gccatggtagctttagataatctgaatggattcattgcactattctttgacactaaaatg
ctccctcaacctaaggggtacaatgactcattagcactggaagctgcactcacacaacca
aatgttatgaatcacatccttgttggcattcaatttgacgatagtatgactaatgctacc
gagtggccagatgatataaaagtgacattaagatttccagcggtcatgagaactccaatg
ttagaacatcccctacgaataagttggagaacaaatctgcttttccctttgttccctcaa
cctggtcctcgtgagccagatgacatgtatggaggcaaaatgccaggatattcaccggaa
atgtttcttgctgtccaacatgccgtgtcccaagagattataaagcaaaaaacaggcaag
cccataaatacgaagatatatctccagcgtctacctcagctgtcgtacaggcgagacgat
ctactcgttgctatggagagatttatatcgatgataataatgatgtgtttcgcttacacc
ttcgtgaataccgtacgagttgtcaccgctgaaaaggaaatgcaattaaaagaaactatg
acaataatgggactgccgtcgtggttgcattggctggcttggttcattaagcaattctcg
tttcttcttatatccgtaacactcatggtgatactgtttaagattcctttcaactcgacg
gaagacggagaaggatatgctgtgctgactttcacgccgtggtccgttctatttttcttt
ctaacgctcttcgtcatagcatccctgtcgttctgtttcatggtcagcgtgttcttcact
agagcaaatactgcggcgtcattcatgggcctcgcgtggttttctacgtacgccgcgttc
atgctgactcaaatgttatacgaggacatcagcctgactactaaattgttgctaagcttg
atatcgaacacggccgtgggatacgctctgcaaatgcttatcatttgcgaaggtacatct
agaggcttacaatggaacgaattctttaccccggtgtcctatcatgaccaatttcagccg
ggtcatgtggctttaatgctaattttagattcaatattatacatgttagttgctatgtac
gtggaaaaaatacgtccaggattgtacggcgtacctttgccttggtactttccttttacc
aaaagtttttggtgccccaacagcaagaaagttgcagctttaacgaataaagacggcgtt
gaccaggaatataaaaacgctttgctgaaggtcatacatgatgaagaacctaaaggagtg
cccatgggcatcaatattgaaaacctcaccaaagtttatcgaggtcgcaagagagccgtt
gataatttaaatcttaggatgtacgaaaacgaaataacagtgttactgggtcacaacggt
gccgggaaaacgactacgatatctatgctgacgggtatggttccaccatcgtccggctcg
gcgacgataaacggatacgacattgtgaccgagacggagcaagctcgcaagtcaattggc
atctgtccgcagcacaacgtgctcttccccgatctcacggtcgctgaacacatcatcttc
tattcgagattaaagggtgtccacaaatcaaagattaacgaggaagtcgaccatttcgtt
aaactattagagctggaagaaaagcgggacgtgatatcgaagcacctgtcgggcggtcag
aagcgtcggctgtcggtgggcgcggccatgtgcggctcgtcgcgcgtggtgctgctggac
gagcccacgtccggcctcgaccccgccgcgcgacgctcgctctgggacttgctgcagaag
gaaaagaaaggcaggacaatgatactcacaacccactttatggatgaagcagacgtgctg
ggagatcgaatagcgataatgtcaggaggccgactgcagtgcgttgggactccatatttc
ttaaagaaacactacggtatcggctacaaaatgaccattgtcaaatcggatcactgcgtt
gtagaagacgttactcggttcttcaaatcatacgttccggatgttaaagagaatactaac
attggctcggaactaacttacatcttaccaaatgatcaagtcagtaaattcccggatatg
cttaaaaagttcgaagaggaaaaagaaaacctgaaagtagcgagttacggtttatctgta
acgagtctagaagaggtattcatgaaagctggcgcagaagacaatggattgacatcaacg
aagaaacacatttacaacaattcatacagcgacgctgccgtcgtccccatggatatgccc
cgcaacaacatactggacaacgagcctatacaaaaagtgcgaggctggaaattacagaga
aaccacataaaagcaatgttcctaaagctagcatacaatacgataagaaataaactcggc
gcgttcatacaaataataacgccgatcataaatatatcgatatcggtgtggatcgctaga
tcctggaagttcatgtcacatctaccgcccctggagctaagtctggcgagcggcttcagg
aaaacgcaaaccctcctatccgagggggcgaatttgaccgaaaacagcatagagaggaga
gcgatgatcgcgttcaaggactacttcaaaaactcgtcggacccgacgatgacgttgacg
gacgtggggaggatggacctggctaagttttacttaaagttgagcgcgggcgagccggcg
cgcgcgcgctacgaggcgctggcgggcgccacgttcgcgccgcagcgcgtcacggcgtgg
ttcagcaactacggctaccacgactccgccatctcgctggcgctggccaacaacgcgctg
ctgggcgcgctggcgcccggcgcctcgctgcgcgtcgtcaaccacccgctgccctactcc
atcgagaacctggtaaaagtaatggcgagcggtagcagtatgggctttcaattcgcattc
aatatcggattctgcatggcgtttgttacatcctttctcgtactctttgttattaaggag
cgcacaagcggcgcgaagctcttgcaacgcgtgtcgggcgttcgtccggcggtactttgg
accacggcgctcatatgggactggctctggctgttactggtgttctttgcaattatctca
acacttgcctttttccaagagaacacattggcgacgcctcaggaattagggagagttctg
ctagtgctgattattttcgctttcgctatgatacctctacactatttggcttcgttctat
ttcgaagctgccgctactggtttctcgaagatgtgctttataaatatattttctggttgc
atgccgtttttaataacagaagttctgagattacctgaagttggcaacccctattatgca
cacatctttgattggctgttctcgccgttacccatctactgtatcagcagaagttttagg
gacatgagcgtgtccgcgttctcgctgctggcgtgcgacgcgctgtgcgcgcagttcgag
accatcgacaactgcacgcgccacaccgtctgcaacaagctcaacgtgtctgtttgctgt
ctcgacgacgacccgtttttgagatggagtgaacccgggatcggtcgatatttgttcacg
atgagcctcgtgggtgtgatcgggtttgctgttttattaataaaggagtacgaagtcttg
aataaggtgcggtacgcggggcgggcggcgcgcgcggcgggcgcggacgaggacgcggac
gtggcggcggagcggcgccgcgtgcaggagctgccgcgcgagcgcctggccgcgcacagc
ctcgtgtgccgcgacctcaccaagtactacggcgacttctgcgccgtcgacaacctcacc
ttcgcggtgcgtaagggcgagtgtttcgggctgctgggcatcaacggcgccggcaagacg
agcacgttccgcatgctgacgggcgacgcgcgcatcagctgcggcgacgcctacgtgcac
ggcctctccatcaagacgcacatccaggacgtgcatcgacacatcgggtactgtccacaa
ttcgatgcgctaatagaaaatttaaccgcccgagagacactaaaaatcttttgtctacta
cgcggaatccccgtgcgagttggatcagcgcgggccatacaattagctgaaatacttgga
tttataaaacactacgataaaaaggtacacgaatgtagtggaggaactaagaggaaaata
agtacagcacttgcgcttctaggggattcgcccttagtatttctcgatgaaccaacgaca
ggcatggacccggcgtcgaagcgtctggtgtggcgcagcgtgagcgaggcggcggcgggc
gggcgcagcgtggtgctgacgtcacacagcatggaggagtgcgaggcgctgtgctcgcgc
ctcaccgtcatggtcaacggccgcctctactgcctcggcccgctgcagcacctcaagaac
aagttctcgcaaggttatactttaataattaaatgtaaagcgggaccagatagagattca
aatgttgcaagaataaaccagtacgtcctcgataactttagagacgctaagctcatagaa
tcttacttgggtataagtacatactacctcgacgatcgggaccttccgtggtggagtgta
ttccatctaatggaggcggcccgcagtctgtactctatggaagattattcggtatcgcag
accacactcgagcaagtgttcctgcgcttcaccaggattcaaggtcaagttgattaa
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integrated database retrieval system
