Vanessa cardui (painted lady): 124530520
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Entry
124530520 CDS
T09161
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcd03016
]
124530520
Enzymes [BR:
vcd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
124530520
Transfer RNA biogenesis [BR:
vcd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124530520
Prokaryotic type
124530520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF5787
Motif
Other DBs
NCBI-GeneID:
124530520
NCBI-ProteinID:
XP_046960661
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All DBs
Position
6:8963383..8972951
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AA seq
721 aa
AA seq
DB search
MNNNWNRNQMRGGNNRGRGHGRGRGPGGFWPQRGFRGSNWRGFNRGGPRQNFDGRKFNQQ
WMQKTKRDGPSKRLSEQDIGVTEYLSDHEGFNGIIKSRFSDFQVSEINEKGEIAKLTDLS
APQPPIDEDVVDDEDLILNKYNLEILPMETWDNINKLAISPEKLEPVKVDVTGMSKEERT
KIHDAVKKAFGESIVGSTVTENDKKFVVFEKYRKGVRIDNRVKWVWPGEYVRFIVYKENC
DTMEAAQRIADRLRLNIKPSMVGYAGTKDRRAKTSQWFSLRKVDPRKIVNACKDLREIRV
GNFSFSNDNLKLGMLQGNVFRICLRNVTASDECIDKACTLLQKNGFINYYGLQRFGSRID
MPTYEIGKKLLQGNFQEAIECMLSECEDVLAAYRAEGARAALARVSRNGGNEARVLRALA
LRPHDLLGALDKVARNARLLYIHSYQSLVWNRVVSERLRRAGRSAAVGDLVPAHGHADEA
IEEESDNDDSQTDLQTDEPSEDTATPTNDTPKPAEQTDAPAKKLIPVKVLTQEDIDSGKY
TIFDIVLPLPGYSVEYPPNMVDYYKELLEKDGLNLDMKHKYKSYSMCGGYRRCALRPRAL
EWRRAHYAHHAHDLLLSDRDLLDGRSAPADDGKYKALLLTMTLPTSCYATMALRELLRVD
TSSDNQALQNNYHEDGNDKNGKDNKDVEANENVSSGEKRKIDDDKDLDEDLVKKTKQNDD
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaataataattggaatcgcaatcaaatgcggggtggaaataataggggtcgaggccat
ggtcgaggtagaggacctggtggattttggcctcagagaggctttcgaggttctaattgg
cgtggattcaatcgaggcggccccagacaaaactttgacggtagaaaatttaaccaacaa
tggatgcaaaaaacgaagcgtgatgggcctagcaaaaggctctcggaacaagatatcgga
gttacggagtatttaagtgatcatgagggttttaatggcattattaaatctagattttca
gattttcaagtgtctgaaattaatgagaaaggtgaaattgcaaaacttactgatctttct
gcacctcagcctcccatagatgaggatgttgtggatgatgaagacctgatccttaataaa
tataatctagagattcttcccatggaaacatgggacaatattaataaattggctatatct
cctgaaaaacttgaaccagtaaaagtggatgttactggcatgtcaaaggaagaaagaact
aagattcatgatgcagttaagaaagcttttggggaaagcattgttggtagcactgtcact
gaaaatgataaaaagtttgttgtctttgagaagtataggaaaggagtgcgtatagacaac
agagtgaagtgggtgtggcctggagagtatgttcgcttcattgtatataaagagaactgt
gatactatggaagccgcacaacgtatcgcagatcgattgagattaaatataaagccgtca
atggtcggttatgccggtaccaaagatagaagagcaaagacatctcaatggttcagtctg
cgtaaagtagatcccaggaagatagtcaatgcgtgcaaggacttgagggaaatccgagtc
gggaactttagcttcagcaacgataacctcaaattgggaatgttacagggaaatgtgttc
cgtatatgtctccggaatgtgacggcgtcagacgagtgtatcgataaagcgtgcacgtta
ctacagaagaacggttttataaactactacggactacaaagattcggctctcgtatagat
atgccgacctacgagataggaaagaaactattacaggggaattttcaagaggctatcgag
tgcatgctgtcggagtgcgaggatgtgttggcggcataccgggcggaaggggcgcgcgcc
gcgctcgcgagagtgtcgcgtaacggcggcaacgaggcgagagtgttgcgcgcactcgcg
ctccgcccgcacgacctactcggcgcgctagacaaggtcgcacgcaacgcgagactgctg
tacatccactcgtaccagtcgctggtgtggaaccgcgtggtgtcggagcgcctgcgccgc
gccggccgctcggccgccgtgggggacctcgtgccggcgcacggacacgcggacgaagcg
atagaggaagaatcggataatgatgatagccaaacagatttacaaactgacgaaccatcc
gaagataccgcgacccccacaaatgatacaccaaaaccagcagaacaaacagatgctcca
gctaagaagcttataccggtaaaggtattgactcaagaggacattgacagcgggaaatac
accattttcgacatcgtactaccgctgcccgggtacagtgtcgaatatccacccaacatg
gtagattattataaggaattgttagaaaaagatggattaaatctggacatgaaacacaag
tataagagctacagcatgtgcggcggctaccgacgctgcgcgctgcggccgcgcgcgctg
gagtggcggcgcgcgcactacgcgcaccacgcgcacgacctgctgctgtccgaccgcgac
ctgctcgacggccggagcgcgcccgccgacgatggtaaatacaaagctctgctcctaact
atgactttaccaacgagttgttacgccacgatggctctcagagaattactgagagtagac
acatcgagtgacaaccaagcgctccagaacaactaccacgaggatggaaatgataaaaat
ggcaaagataataaagatgttgaagctaatgaaaatgttagttcgggagagaaaaggaaa
attgacgacgataaagatctcgacgaagatttagttaagaaaactaaacaaaatgatgat
gaataa
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