Vanessa cardui (painted lady): 124530758
Help
Entry
124530758 CDS
T09161
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
vcd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124530758
03015 mRNA surveillance pathway
124530758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124530758
03041 Spliceosome [BR:
vcd03041
]
124530758
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124530758
Spliceosome [BR:
vcd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124530758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
124530758
NCBI-ProteinID:
XP_046960982
LinkDB
All DBs
Position
6:6848597..6857887
Genome browser
AA seq
931 aa
AA seq
DB search
MMMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILKM
EDDVVIDYVNNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPES
FTQQKKEEIKKRMEEQQKDKDKDKDRRRSRSRSRRRSRDRRRSRSRSRDRSSDRKHRSGG
SPRRSRRRSRDKSSQSKPSHVDEIKLPEPKENGKSPEKVEEPENKEEVNHNSTTETIKED
NQEEPVKEEKTETETKSRSASPEKPAAEKEEEKPVEKTRNSSSERRSSSASSRGSAKKRS
SHKKRQYRSNRDSSTSVSPRRSSRRERSKSRRRSSRRRSVDRRERERERERERERERRRR
ERERRERSRERRRSLERRRRSRSRSRRRSRDRSRDRRRSRSRRRTRSRRRSGRRSRDRRS
RDRRSRDRRTRDRSRDKRSRDRSGKERRSRDRKSRDRRSSDLIKERLEKSVSIPRKENLE
KLRKKSPERVSVPREGSKERVSSSSRESSVANEKVVTQHEGMFKPIQSTEDDDREDFIAV
PVLREYSKSLSRTPSPFLRKHEIENKKSDKSGDDASGKEQNEEETAKVQEAKKSKRKGRQ
SESESESSEEVSKSKSKSKLKRKEKPTSKRSKKAKKESSSSESESDDSSSSDSEEDRKKK
SKKNAKKKLAKKSRKKRARSSSSESSSEEEVKHKSSKSKQKNIPEESDIDKKSKKRGKDS
NTERSRPDKESKQVKTKKADNSEDSHDDSSDSDEKSTKKKAKHDSTSSEKEMRRKKADPA
KEKIASPEVSKSKKGEEKPSKIKHADDIKSKSRDDGEKKAKKREKEDSSSDSDQVSKKKA
RKKVSDSESDSDSDEPKKSKKAKKHKKHSKKHKKHKKHKKASKRKDDSSDSDEAEEEEEE
EGKVNNEDLEKKLRERALKSMKKQTSVSGSD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtacacgggcacaagtacagagcaagatacacgcttcagtgacaaggagaaa
aaacttatgaagcaaatgaagtttggagattgtttgacgcagcaggtggacatgtccaag
gtgaagctggatgtgctgaagccatggatcacacagaagattaccgagattctcaagatg
gaagatgatgtcgtcatcgactatgtcaacaaccaactcgaggaaaagttcccatgtcca
aagaaaatgcagatcaacttaactggattcctcaacggaaagaatgctcggctgttcatg
ggagagctgtgggagctgttgctgagcgcacaggcgagcgagaacggcataccggagtcc
ttcacgcagcagaaaaaggaggaaataaagaaaagaatggaggagcaacaaaaagacaag
gacaaagacaaagatcgtcgcaggtcgcggtcgcggtctcggcggcgctctcgagaccgt
cgtcgctcacggtccaggtcacgtgaccgttcttctgacaggaaacatcgcagtggtggc
agccctcgccgttcacgaagacgcagtcgcgataaaagcagccagtccaaaccttcgcat
gtcgatgaaatcaagctaccagagccaaaagaaaatggaaagtcgccagaaaaagtagaa
gaacctgaaaataaggaagaagtaaaccataactcaacaactgagaccattaaggaagat
aaccaagaagagccagtgaaggaagagaaaactgaaaccgaaactaaatctagatctgcg
tcaccagaaaagccagcagctgaaaaagaagaagaaaagcctgttgaaaaaactcgcaat
tcgtctagtgaacgcagatcttcatctgcatcatcacgtgggagtgctaagaagagatct
tcccacaagaaaaggcagtatcgctccaatcgcgactcatctacaagtgttagtccaaga
cgcagttcacgcagggagaggagcaagtctcgccgccgcagcagtcggcgtcgctcggtg
gatcgccgtgaacgggagcgggagcgggagcgagagcgggagagggagcgacgacggcgt
gagcgggaacggcgcgagaggtcgcgagaacgtcgccgatcgcttgaaagacgtagacgc
tcacgttcacgctctcgacgacgttcaagagacaggtctcgcgatcgtagacgttcgcgt
tcccgcaggcgcacgcgttctcgccgtcgttccggacgtcgctcgcgcgaccggcgttcg
cgggaccggcgctcgcgcgaccgccgcactagagacaggtcaagggataaaagatcaaga
gatcgctccggaaaagagagaagatcgagggatagaaagtcccgtgataggagatcgagc
gatttgattaaggagcgcttggagaaatctgtatccataccacgtaaagaaaacttggag
aaactacgcaagaaatctcctgagcgagtatctgttcccagagaaggctctaaggaacgc
gtatcgagttctagtcgtgaatcatctgtagcaaacgaaaaagttgttacacaacatgaa
ggcatgtttaaaccaattcaatcaactgaggatgatgatagggaagatttcattgcagta
cctgttctcagagagtactcaaagagtctatctcggacaccttcaccattcctaagaaag
catgaaattgaaaacaaaaagtctgataaatctggtgatgatgcctctggaaaggaacag
aacgaagaagaaactgctaaagttcaagaagcaaagaaatctaaacgtaaaggaaggcaa
tctgaatcggagagtgaaagtagtgaagaagtctctaaatctaaaagcaaatctaaacta
aaacgtaaagagaaacccacttcaaaaagatctaagaaagcaaaaaaggagagctcttca
agtgagagtgagtccgatgattcttcctcaagtgattcagaagaagataggaagaagaaa
agcaaaaagaatgctaaaaagaagttagcgaaaaagtcacgaaagaagagagcacgatct
tcgagttcggaatcgagttctgaggaggaggtgaagcataagagttctaaaagtaaacaa
aagaacattccagaggaatctgatattgacaagaagtcgaaaaaacggggtaaagattca
aataccgaacgttcaaggccagataaagaaagtaaacaggtaaagacaaagaaagctgac
aattcagaagattcccacgacgatagctcggacagtgacgagaaatcaactaaaaagaaa
gctaagcatgattctacttcgtctgaaaaagaaatgagacgtaaaaaggcagatccagct
aaagaaaaaatagcttcgcctgaagtctcaaaatccaagaaaggagaagagaaaccatct
aaaattaagcatgctgatgatataaagtctaaatcacgtgacgatggtgagaaaaaagct
aagaagagagagaaagaagattcctcatccgacagtgaccaagtctcaaagaaaaaagct
aggaagaaggtatcagattctgaatcagattcggacagcgatgaacctaaaaagtctaaa
aaggctaagaaacacaagaaacattcaaagaagcataagaaacataaaaaacacaagaaa
gcttcaaagcgaaaagatgattcttccgacagtgacgaagcagaagaggaagaagaggag
gaaggtaaggtgaataacgaggacttggaaaaaaaacttcgtgaaagggcattgaagtct
atgaaaaagcaaactagcgtgtctgggtcagattaa
DBGET
integrated database retrieval system
