Vanessa cardui (painted lady): 124530845
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Entry
124530845 CDS
T09161
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124530845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124530845
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124530845
mRNA degradation factors
5'-3' decay
Decapping complex
124530845
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
124530845
NCBI-ProteinID:
XP_046961131
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All DBs
Position
7:1357248..1371691
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AA seq
1161 aa
AA seq
DB search
MQPTTMLPKLTDSTQTISFSEGDGVCSSEVYASDVVVTTNAGNHNHGSSKVKLKSLVDYN
WEPKFYPGQLLAVHISGKYLAYSIKAPNAANPGTWNGMVRVVYNPEPGIDRRTLIKGMKG
EVQDLAFAHIPNQVVLASIDEMGNFYIHEIEVTESGLRCTLSAEVREDTGVGGSTHRVVW
CPYIPDEDDAPDDDVARLLLTTHANQARMWNIRACSALCGAAGAGGAAGAGGALGAGAAL
ASGAGRGAGAHGGAVLAAAFSPDGTALATAAADGYVMFAQVYMNNESSPRCLHKWQPHGG
KPLSCLFFLDNHKNYNTDVQFWKFAVTGAENNTSIKIWSCKSWNCLQSITFSPSLGGDTL
GMKAMLDTSASYLLLSDFKTRSLYVLNMARDSEDTMAYCKSISEFLLPYPVLSFCIVDAE
EQQVKCESSCDDPYHTNGSSGDVGDSPDDFEVHHDSVESPHQAVCVQEEGERRVRLRLYI
VQPKGLQEGELIYAPRLQRNTLPLHDLEQLSLEEGSAAEGALPTSILQQQTQQLKSLLMR
SQTQPGSLIGQRPESPTTMPPQLNLMTPDAFSSPGKREDDDPPLSATPEINNKPRVSTGG
LVSVPTVGLAEEGPEVSAVAVTGVEGKTSGGSSPSREVQQIMSHTTTPFYTDMEEEEEVS
KQTPPPEGGEVAAGSVAAPSEPFYTSELFTTPEKPPPPAKLTHANSDTSWPQISLAQITE
ANQRKASSEKSSTQSLSAPPPAPPAPPAPPAPDDHTRTRLEALEQKLDILTELVSTQTRE
LRALRGDVCAPRAQLDDALHAHAQRTAVAVDNALSAGWERVTRLSEAASAQAAAAAGAGA
ARALEPLARALQHELAAKLTATDRLLRDNIEKLASSKTVMERLSTAIATSLTEMVRESFR
SALFESVVPVMEKAHAQIFRQINHAFQTGTKEFAANTEAAARAAAERGGAAGAGPLLRAL
ERHADALAAHAPPAPHHYAAQLRDVVHSVLEKEVSWWREQARSVQLSRAHSPATPAAPSV
ADRQMQVSQIQSLMMSGDVNGAFQLALSASDLALVVAACRAAEPARVLGPPCRLKQHVLL
SLVQQLAADMTRDTHLKHRYLEEAVMNLDTTNPVTREHLPVVIRELQKQIVAFLNSNPGH
ALSRQFRMLLMATESLVKNTV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctacaacgatgcttccaaaacttactgattcaactcaaacgatctcattttcg
gaaggtgatggtgtctgtagttccgaagtttatgcatcagatgtagtagtgacaactaat
gctggtaaccataatcatggtagttcaaaagttaagctgaaaagccttgttgactacaat
tgggagcccaagttctacccaggccagcttttagctgttcacattagtggcaaatactta
gcatacagtatcaaagcacccaatgctgccaaccctggcacatggaatgggatggtgcgt
gtagtttataatcctgaaccaggcattgatcgaagaacacttataaaaggcatgaaagga
gaggtacaagatctagcatttgcacatataccaaatcaagtggtattggccagtatagat
gagatgggaaacttttatatacatgaaattgaagtcactgaaagtggactgcgctgcaca
ttatcggcggaggtgcgcgaggacaccggggtgggcggcagcacgcatcgcgtggtgtgg
tgtccctacatccccgacgaggacgacgcgcccgacgacgacgtggcgcgcctgctgctc
accacgcacgccaaccaagcccgcatgtggaacatccgcgcgtgctcggcgctgtgcggc
gcggcgggcgcgggcggcgcggcgggcgcgggcggcgcgctgggcgcgggcgcggcgctg
gcgagcggcgcggggcgcggcgcgggcgcgcacggcggcgccgtgctggccgccgccttc
tcgcccgacggcacggcgctcgccaccgccgccgccgacggatacgtcatgttcgcgcag
gtgtacatgaataatgagagcagcccgcgctgcttacacaagtggcagccgcacggaggg
aaaccccttagctgtcttttcttccttgataaccacaaaaactataacactgacgtccag
ttctggaaatttgctgtaacgggtgctgagaataatacatccataaaaatctggtcgtgc
aaatcttggaattgtctccagtcgattacattctctccctccctgggtggggataccctg
ggcatgaaagccatgttggataccagtgctagctacttactactatctgattttaagaca
agaagtctgtatgtgttgaacatggcaagagacagcgaggacacaatggcctattgcaaa
agcatatctgagttcctcttgccataccctgtgttgagcttctgtatcgtcgatgctgag
gagcaacaggtgaaatgcgagtcgagctgcgacgacccgtaccacaccaacggctccagc
ggcgacgtgggcgactcgcccgacgacttcgaggtgcaccacgactcggttgagtcccca
caccaggctgtgtgtgtgcaggaggaaggcgagcgacgcgtgcgcctgcgcctgtacatc
gtacagccgaagggactgcaggagggcgagctcatctacgcgccgcggctgcagaggaat
accctgcccttgcatgatctggagcagctgtcactggaggagggctcggctgcggagggc
gcgctgcccaccagcatcctgcagcagcagacgcagcagctgaagagtcttctcatgcgt
tcccagactcaacctggtagtttaatcggtcaacggccagaatctcccacaacaatgccc
cctcaactgaatctcatgactcctgatgcgtttagttcgccgggtaagcgggaagacgac
gatccgcccctgtcagccacaccggaaatcaataataagccgagagtttccaccggaggc
ctggtgtcggtgcccactgtgggtctggcggaggagggtccggaagtttcagcggtggca
gtcacaggggtggaggggaagacatcgggcggctccagccccagccgggaggtgcagcag
attatgtcgcacaccaccacgcccttctacaccgacatggaagaagaagaggaggtgtcg
aagcagacgccgccgccggaggggggggaggtcgcggccggcagcgtcgccgcgcccagc
gaacccttttatacctctgaactatttacgacgcctgaaaagccgcctccgcccgccaag
ctgacgcatgctaatagcgacacgtcgtggccgcaaatatcgctcgcgcagataaccgag
gccaaccagaggaaagcctcgagcgagaagtccagcacgcagtcgctcagcgcgccgccc
cccgcgccgcccgcgccgcccgcgccccccgcgcccgacgaccacacgcgcacgcgcctc
gaagcgctcgagcagaagctggatatactgaccgagctggtgtcgacgcagacgcgcgag
ctgcgcgcgctgcgcggcgacgtgtgcgcgccgcgcgcgcagctggacgatgcgctgcac
gcgcacgcgcagcgcaccgccgtcgccgtggacaacgcgctgtcggcgggctgggagcgc
gtgacgcggctgtcggaggcggccagcgcgcaggcggcggcggcggcgggcgcgggcgcg
gcgcgcgcgctggagccgctggcgcgcgcgctgcagcacgagctggccgccaagctcacc
gccaccgaccgcctgctgcgcgacaacatcgagaagctcgccagcagcaagacggtcatg
gagcggctgagcaccgcgatcgcgacgtcgctgacggaaatggtgcgcgagtcgttccgc
tcggcgctgttcgagagcgtggtgcccgtcatggagaaggcgcacgcgcaaatcttccgg
cagatcaaccacgccttccagaccggcaccaaggagttcgcggccaacacggaggcggcg
gcgcgcgcggcggcggagcgcggcggcgcggcgggcgcgggcccgctgctgcgcgcgctc
gagcgccacgccgacgcgctggccgcgcacgcgccgcccgcgccgcaccactacgccgcg
cagctgcgcgacgtcgtgcacagcgtgctggagaaggaggtgtcgtggtggcgcgagcag
gcgcgctccgtgcagctgtcgcgcgcgcactcgcccgccacgcccgccgcgccctccgtc
gccgaccgccagatgcaggtgagccagatccagtcgctgatgatgagcggcgacgtgaac
ggcgcgttccagctggcgctgtcggcgtcggacctggcgctggtggtggcggcgtgccgc
gcggccgagccggcgcgcgtgctgggcccgccctgccgcctcaagcagcacgtgctgctg
tcgctcgtgcagcagctggccgccgacatgacgcgcgacacgcacctcaagcacaggtat
ctagaagaagctgtgatgaacttggatacgacaaatccagtgacacgcgaacacctgcct
gtggtcataagggagctgcagaaacagatagtggccttcctgaactcgaacccgggccac
gctctcagcaggcaattccgcatgttgctgatggccaccgagtcgctggtcaaaaacacc
gtctga
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