Vanessa cardui (painted lady): 124530864
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Entry
124530864 CDS
T09161
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124530864
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124530864
Spliceosome [BR:
vcd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124530864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
THRAP3_BCLAF1
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124530864
NCBI-ProteinID:
XP_046961169
LinkDB
All DBs
Position
7:complement(5300472..5306039)
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AA seq
980 aa
AA seq
DB search
MGRGRDRSRDRRRSRSRSRSRSRSRSPRYGLGSGGGGGGGGYGGGGRRSNPGANLRKPKW
DLSRLKPFKKDFYVPHSEVENRPESEVEAWRSENEITLKGRNIPKPTLTFDEAGFPDYVM
DEIDKMGFSKPTPIQAQGWPIALSGYDMVGIASTGSGKTLSYILPAIVHINNQPKSSRGD
GPMALVLAPTRELAQQIQEVCDKFANTSKIHNTCLFGGAPKGPQARDLDAGVEIVIATPG
RLLDFLESGRTNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPREV
QSLAAEFLKDYLQINVGSLQLAANHNILQIIDVCMEYEKETKLSTLLKEIMAEKENKTII
FIETKRRVDDITRKMKRDGWPAVCIHGDKSQNERDWVLQDFRSGKAPILVATDVAARGLD
VDDVKFVINFDYPSNSEDYVHRIGRTGRTNKTGTAYTFFTPSNAAKAADLVSVLKEAKQV
VNPKLQELAERGGGGGRRHRGRGGRYRRGRRSRSRSRSRDRRRRSRTRSRSRDRRRRRHS
SSRSSRSRSSRSSRSHSRSRSRSRSRSRSGKCSPLKDGSNIGPQPATQALLPTPKPLLPT
PIGPQLPPSHFDRPNGKASSTPPIRNNETRSNDTDFSPNNNINNNVNNHINHDTNLQQPQ
QQQANSIPPLMAINPQMNMCVPPPMNGPGFMMPPYFPSDQYGMMMPPFPPNAMLNTTGWG
APPPPPPPPPPTETSGGPQNNYDYGQSGSGQSRLPESDSRKRGSRSGGLGTSSSFGLGSG
GLGSEGGFGSSSGGLGSTDNYGGGLGSGGLGSGGGLGSDESQSGSRSRGNRDRRRRGRGR
DHDDYNSDSPSGGLGSHGSGGLEGGLGQATGGLATGGLGVPHGSLLPRMLPQNVGDFGGQ
QSANFTAFGSYGSKNNKRNEPENDGCNYDSSNMNGVDYYGQNMGPGRPFTSGMDPDMSNG
ALANGSMGYRNDRQGNRQRR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtggaagagaccgcagtcgagataggcgtcgcagtcgaagtaggagtagaagc
agaagtcgaagccgtagtccgcgctacgggctcgggtcaggtggtggcggcggcggtggt
ggttatggcggaggaggccgaagaagcaatccgggagcaaatcttcgtaaacccaagtgg
gatttaagtaggctaaagccatttaaaaaggatttttatgtaccacacagtgaagtagag
aatagacccgagtcagaggtggaagcttggagaagtgaaaatgaaataactttgaaaggc
cgtaatatacctaaaccaacacttacttttgatgaagctggtttccctgattacgttatg
gatgaaattgataaaatgggattttccaaaccaaccccaattcaggcccaaggttggcca
attgctttaagtggctatgatatggttggcattgcttcaacaggttcaggaaaaaccctc
tcatacattttgccagctattgttcatataaataatcaacctaaatcaagcagaggtgat
gggcctatggccttggtgttggctccaacaagagaacttgcccaacagattcaagaagta
tgtgataaatttgcaaatacatcaaaaatccacaatacctgtttgtttggaggtgctcca
aaaggacctcaagcaagagacttagatgcaggtgttgaaattgtaattgcgacacctgga
cgtttgttagactttttggaaagtggacgaactaatttaaagagatgcacttatttagtc
ttagatgaagctgacagaatgttggatatgggttttgaacctcaaatcagaaaaataata
gaacaaataagacctgaccggcagacacttatgtggtctgcgacttggcctagggaagtt
caaagtttagcggcagaatttttaaaagattacctacaaattaatgttgggtcattgcaa
ctggctgcaaatcataatattttacaaattattgatgtctgtatggaatatgaaaaggaa
actaaattaagtactttactcaaagaaataatggcagaaaaagaaaataaaactatcatt
ttcattgagacaaaacgacgagtagatgacataacaaggaaaatgaaaagagatgggtgg
cctgctgtttgtattcatggcgacaaatcacagaatgaacgtgactgggtattacaagat
tttcgcagtgggaaagcgcctattcttgtagcaacagatgttgctgcaagaggattagat
gttgatgatgtcaagtttgtaatcaattttgattaccctagtaactctgaagattatgtt
caccgaatcggtagaacaggtagaactaataaaactggaactgcatatacattttttaca
ccatcaaatgctgccaaggctgcagatcttgtctcggtgttaaaagaagccaagcaagta
gttaatcctaagctgcaagagctagcagaacgaggtggtggtggtggccgaagacaccgt
ggtcgcggtggcagatacagaagaggacgtcgatcaagatctcgatcccgatctcgtgat
cgacgtcggcgatcacgtactcgttcacgatcccgagatcgccgtcgacgcagacacagc
tcgtccagatcatcacgcagcaggtcatcgagatcttcgagaagtcactcgcgctcgcgt
tcccgttcacgtagccgatctcgctcaggcaagtgcagcccactgaaggatggttctaat
attgggccccagcctgcgactcaggctctgctgccgacgcccaaaccacttttgcccaca
cccattggtccccaattacctccctcacattttgatagacctaacggcaaagcttcctca
acacctcccattcgaaataatgaaacacgatctaatgatactgatttttcccctaataat
aatataaataataatgttaataatcacataaaccatgataccaatttacagcaaccacaa
caacagcaggcaaactcaattccacctttaatggctataaatcctcaaatgaatatgtgt
gttcctcctccaatgaacggtccaggctttatgatgcctccatactttcccagtgatcaa
tatggaatgatgatgccaccttttcctcctaatgccatgctcaatactactggctgggga
gcaccacctccaccccctcctcctcctcctcctacagaaacaagtggtgggccacaaaac
aattacgactatggacaaagtggctcggggcaaagtcgcctcccagagtcggattccaga
aaacgaggaagtcgttctggtggcctcggaacttcgagctcgtttggcttgggctcaggc
ggcctgggttccgaaggaggcttcggatcgtctagcggtggcctcggctcgactgacaac
tatggcggtggtctcgggtcaggcggcctaggctctggtggcggccttggctccgatgag
agccaaagcggctcgcggtcgcggggcaatcgtgaccgacgtcgacgaggaagaggacgt
gaccatgatgactataactcggatagtccgagtggtggtctcgggtctcacggctcgggc
ggccttgaaggcggcctgggtcaggcaactggcggattagctactggcggtcttggcgta
ccccatgggagcctcttgccgcgcatgcttccgcagaacgttggtgacttcggaggacaa
caaagcgcaaactttacagctttcggttcttacgggtctaaaaacaataaaagaaatgaa
cctgaaaatgacggttgtaattatgatagtagcaatatgaatggtgttgactattatggc
caaaatatgggacctggccgacctttcacatctggtatggatccagatatgtctaatggt
gcgctggctaatggctccatggggtacagaaatgaccgccagggcaatcgccaacgacgg
tga
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