Vanessa cardui (painted lady): 124530916
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Entry
124530916 CDS
T09161
Name
(RefSeq) tripartite motif-containing protein 45
KO
K12021
tripartite motif-containing protein 45
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcd04121
]
124530916
Ubiquitin system [BR:
vcd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124530916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
Filamin
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4_4
Remorin_C
Motif
Other DBs
NCBI-GeneID:
124530916
NCBI-ProteinID:
XP_046961240
LinkDB
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Position
7:1934659..1954265
Genome browser
AA seq
623 aa
AA seq
DB search
MSLICFSRKRQERRKSAEPTSISAGNSPLKCKGSRPASQSVSIAARTSAYEKIKDWECGI
CKRELVEPRLLGCLHSFCTRCLQGLHHEGENQVWEDIDGESIHHDPGGSGGGSAGSGYES
DFHHSDSETSFEKNRKYGIITRKISGRSCHFVLCPICGFETQLPLGGVSALPLNYVLLRK
MANQESGNSVLCDLCCTDNKAENRCTHCLVSVCMSCGDTHTKQKGNANHLLQPLGPILRF
CGQHPKAELSVYCATCQQVICRDCCLISHSGHAVASAARAAAERAGALRDACERARHVPG
NVERANRILDVRAAEVDEQASRVENEILAWSEEYRRAVEAHARALGAAAVRARAQHRRRA
RRQAALLHARAAHARHAVRFAEELLSEGKEDELLSLSGPVLRRLERLTELQPLSEPPRCE
LRFAPGAPATNQPTLVGRLFTLAADPDRCVLETDGLQDLQVNVQHTVILHLQDRSGEKIW
YSGENVAGYFRRRDSSARPACVRVRARPDGACALQLAAPAPGHYLLAVTVDSTPIKGSPF
SCSARACAAHTGQFHCCAFCSSGGRRDAVCACGASMGAGYKGCGHGHAGWPGARHWSCCG
STARAPPCAAPAPRPHALYQFSL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaatttgcttttcgcggaagaggcaggagagaaggaaatctgcggagcctacg
tcaataagtgctggtaatagtccactcaaatgtaagggttcaagaccggccagccaaagt
gtttcaattgctgccagaacatcagcttacgagaagattaaggactgggaatgtggaata
tgcaaacgggagttggttgagccaagacttctgggttgtctgcacagcttttgcacgaga
tgtctccaagggttacaccatgaaggcgaaaatcaggtctgggaagatatcgatggagag
tctatccaccatgatccgggcggttccggtggtggatcagctggttcgggttacgaaagt
gactttcaccactcagattcagaaacaagctttgaaaaaaatcgcaagtatggaataatt
acaagaaagatatcaggaagaagttgtcatttcgttctgtgtccgatatgtgggttcgaa
acccaactgcccctgggcggagtgtccgccttgccgctcaactacgtgctgctgaggaag
atggccaatcaagagagtggcaactcggtgttgtgtgacctttgctgcacggataataag
gcagagaatcgttgtactcattgcctcgtgagtgtgtgtatgtcgtgtggagacacacac
acgaaacagaagggaaacgcgaaccatctactgcaaccacttggaccaatcctgaggttc
tgcggacaacatcccaaggccgagctgagcgtatactgcgctacttgccaacaggtgatt
tgcagggactgctgcctcatctcgcacagcgggcacgccgtggcgagcgcggcgcgcgcg
gcggccgagcgcgccggcgcgctgcgcgacgcttgcgagcgcgcgcgacacgtgcccggc
aacgtcgagcgcgccaaccggatcctggacgtgcgcgccgccgaggtcgatgaacaagcg
tcgcgcgtggagaacgagatccttgcgtggtcggaggagtaccggcgcgcggtggaggcg
cacgcgcgcgcgctgggcgcggccgccgtgcgtgcgcgcgcgcagcaccgccgccgcgcg
cgccgccaggccgcgctgctgcacgcgcgcgccgcgcacgcccgccacgccgtgcgcttc
gccgaggagctgctctccgagggcaaggaagacgagctgctctcgctcagcgggccggtc
ctgcggcgtctggagcgcctgacggagctgcaaccgctgtcggagcccccgcgctgcgag
ctgcgcttcgctcccggagcacccgccaccaatcagcccaccctagtgggcaggctgttt
acactggctgcagatcccgatcgatgcgtgctggaaacagacggattgcaagaccttcaa
gtgaacgtccagcacacggtgatattacacctccaggatcgaagtggggagaaaatttgg
tacagcggcgagaatgtggcgggctacttccggcgccgcgactcgagcgcgcgtccggcg
tgcgtgcgcgtgcgcgcgcggcccgacggcgcatgcgcgctgcagctggccgcgcccgcg
cccgggcactacctgctcgccgtcaccgtcgacagcacgcccatcaagggcagtccgttc
tcgtgcagcgcgcgtgcgtgcgcggcgcacacggggcagttccactgctgcgccttttgc
tcgtcgggggggcgccgggacgccgtgtgcgcctgcggggcctccatgggcgccgggtac
aagggctgcgggcacgggcacgcgggctggccgggcgcgcggcactggtcgtgctgcggc
agcacggcgcgcgcgccgccctgcgccgcgcccgcgccgcgcccgcacgcgctctaccag
ttctcgctctga
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