Vanessa cardui (painted lady): 124530927
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Entry
124530927 CDS
T09161
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124530927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124530927
03036 Chromosome and associated proteins [BR:
vcd03036
]
124530927
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124530927
Coactivators
SAGA/TFTC/STAGA complex
124530927
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124530927
STAGA complex
124530927
TFTC complex
124530927
SAGA complex
124530927
SLIK complex
124530927
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_VPS8
CFAP251_N
ANAPC4_WD40
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Aladin
DSE1_N
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
PAC11
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_NOL10_N
ASA1
Beta-prop_WDR19_1st
Beta-prop_HPS5
DUF7165
SHKBP1_KCTD3_C
Beta-prop_Vps41
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
124530927
NCBI-ProteinID:
XP_046961255
LinkDB
All DBs
Position
7:complement(7705721..7713550)
Genome browser
AA seq
651 aa
AA seq
DB search
MGDKSTPLLAVLQLLRKYDLKGTEEILRKEANLGDAEYENLDLPEVELASILTAHHTESD
PYSYEFAYDSLKKFVENSLDIYKYELSTFLYPVFVHMYLILILYDHNEHAKKFMEKFGPE
QEDYYQEDLKRLAVVENKDQIKGNELAEVYNTNKFQVQLSRDASTQLKRYLHEQKSSPVI
INIINNHIQIDIHDGPGRTQAQVKATVGGLLGEASRNDNRTKVYYGLLKEPDIQVLPAPI
EDEDEADETPDKPKKKKAKKDNIFMKKPKSDPNAPPNDRIPLPELKETDKIEKGKALREA
SKRVQLGPDSLPSICFYTLLNSGQTAVCADICDDSTLLAVGFNNSSIKVWTLTTVRLRGM
KSAEKLQDIDREAGDVLVRMMEEKDRDTCRTLFGHSGPVYKVAFDPFKTMLLSCSEDSTV
RLWSLQCWTCLVVYRGHVWPVWDVRWSPYGYYFASGGHDHTARLWATDHHQPLRIFAGHH
SDVDCIQFHPNSNYIATGSSDRTVRLWDCLTGSQVRIMTGHKSTPFALAFSACGRWLASG
AGNGEIVVWDMSTGLPTATLPPMHSAPVHALAFSRDGTILSSGALDSTIKLWDFSLISDE
SSSEESGMTNLTQKEEKFLLRSFATKNSPIKNLHFTRRNLLLAVGSYEGSS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgggcgataaatcaacaccgcttttagcggtactccaactcctacgaaagtatgatttg
aagggcactgaagaaattttaaggaaagaagcaaatctaggtgacgctgaatatgaaaat
ttagacttacctgaagttgaacttgctagtatactaacagcacatcacactgaaagtgac
ccatatagctatgagtttgcttacgatagcctaaaaaaatttgtcgaaaattctttggac
atatataagtatgaactgtcaacatttctgtatccagtgtttgttcatatgtatttaatc
cttattttatatgaccacaatgaacatgctaaaaaatttatggaaaaatttggtccagaa
caagaagattattaccaggaggaccttaaacgcttggcagtagttgaaaataaagatcaa
ataaagggtaatgaacttgcagaagtatacaatacaaacaaatttcaagttcaactgtca
agagatgcttctacacaattaaaaagatatctacatgaacaaaaaagttcaccagtgatc
ataaatataattaataaccacatccagattgacattcatgatggtccagggaggacccag
gcccaagtaaaagcaactgttggtggactccttggtgaagcttcaagaaatgataatcgc
accaaagtttactatggccttctaaaagaacctgatattcaagttctccctgctccgatt
gaagatgaggatgaagctgatgaaactccagataaaccaaaaaaaaagaaagctaaaaaa
gataatatatttatgaaaaaaccgaaatctgatccaaatgctccgcctaatgacagaatt
ccattacctgaattgaaagagactgataaaattgagaaaggtaaagctcttagagaagct
tctaaacgtgtccaacttggtcctgatagtctaccttccatttgtttctacacacttttg
aacagtggccaaactgctgtttgtgctgatatttgtgatgattccactttacttgctgta
ggcttcaacaattcttcaataaaggtatggacactaacaactgttcgcttacgaggaatg
aaatcagcagaaaaattgcaagatatagacagagaagcaggtgatgtattggtaagaatg
atggaagaaaaagatagagacacatgtcgtacactatttggacattcaggtcctgtgtat
aaagttgcatttgacccatttaaaaccatgctgctgtcttgttcagaagattcaacagta
agactatggtcgctgcagtgctggacgtgtttagtggtgtaccgtggtcatgtgtggcct
gtgtgggatgttcgttggtcaccatatggctactactttgcatcgggtggccacgatcac
acggcacgcctctgggccaccgatcaccatcagcctcttaggatatttgcaggacaccat
tccgatgtggattgtatacaatttcatccaaattccaattacattgctactggctccagc
gaccgtacagttagactatgggactgtttaactggatcccaagttcggattatgactgga
cataaatcaacaccattcgcgttagctttttctgcttgtgggagatggttagcatcggga
gctggaaatggagaaatagtagtgtgggatatgtcgacaggcttgcctacggcgacctta
ccgcctatgcactcagcgcccgtacatgcattagcgtttagtcgcgacggaaccatctta
tcttctggtgctttggattccacaatcaagctttgggatttcagcttaatatctgacgaa
agttccagcgaagaaagtgggatgactaacttaacacaaaaggaagaaaagtttttatta
cgttcctttgcaacaaaaaattcacctattaaaaatttacattttactagaaggaatctc
ctgctagctgttggatcatacgaaggaagttcatag
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