Vanessa cardui (painted lady): 124531239 Help Entry 124531239         CDS       T09161                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism vcd  Vanessa cardui (painted lady) Pathway vcd04382   Cornified envelope formation vcd04512   ECM-receptor interaction vcd04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:vcd00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     124531239  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     124531239  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     124531239  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:vcd04147]     124531239    00536 Glycosaminoglycan binding proteins [BR:vcd00536]     124531239 Exosome [BR:vcd04147]  Exosomal proteins   Exosomal proteins of other cancer cells    124531239 Glycosaminoglycan binding proteins [BR:vcd00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    124531239 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  124531239 NCBI-ProteinID:  XP_046961694 LinkDB All DBs Position 7:7682667..7695539 Genome browser AA seq 1828 aa AA seqDB search MAVHVLWLVAALVLGGVKTQEDSYERGDVEENNIYDNQWPQTDWISQSAYQPPASRTYGL SRRPDVAVPTSNPSPPPPPPPRQRGSYGQNFAVYDPVTRQRTSAIDRNCTAPGCCVPKCF AEKGNRGFPGMPGVQGMRGLPGHEGAEGPQGPKGQKGQFGPQGPRGPKGDRGKPGAQGFP GLAGPPGPQGETGAPGIPGRDGCNGTDGEPGLMGPKGFQGPRGFSGPKGEKGDKGEPAHI GRYPKGQKGEPGMDGMHGPPGPVGPTGPTGLVGPKGNTGPIGLPGFKGDKGSKGLKGQSI QGDKGDRGDKGDKGPSCPSETLPSLDNKGAIKGVKGDMGPKGEKGEPGKMGDKGELGHMG EPGIPGLMGIKGEKGIRGNPGPSGRRGMYGEPGPMGQKGDRGYDGLAGLPGRPGAKGEPG KDGLAGPRGLKGVPGPPGGRMGSRGPPGPVGPRGYTGPAGPPGSDGRPGDMGIQGPMGPR GGPGEPGNPGLEGMPGHKGEKGEPGLDGPHGEIGPRGYDGPTGPTGPRGPKGEDGLSIPG LKGTSGQSGYPGDKGQKGEKGYQGLRGVPGNSTLGTPGSPGEMGPPGEKGEKGTPGYNGL PGSPGQKGDIGGHCNDCRPGGPGAKGDRGLDGIPGQRGERGPIGPVGVPGERGSDGINGA PGSPGAPGERGDDGPIGSPGESGANAIIPSNLVKGPPGERGFPGEKGNMGPKGDRGLDGQ PGDRGLSGMPGQKGDTGRMGPPGIDGIPGADGSPGLPGSNGISIKGEKGLIGNPGQKGDK GFAGRLGEKGEPGQCPIELKVLTKGEKGSPGAPGPQGPLGMPGEKGDRGLPGKTGDKGES GLPGRAGPVGARGLPGLKGDKGDLGAMGFPGTQGEVGPRGFPGLPGYKGDKGEVGASMPG PPGLPGLKGDKGDYGLIGKPGIPGNDGPPGPIGLQGEKGDLGNAGRPGLPGAPGLKGEPG PVGPPGITGVPGTPGRDGPKGQQGYPGLPGKPGNMGLPGQKGEPGMQGPDGPKGFPGPRG HPGLRGLTGVDGSPGEKGDKGEIGFPGLPGERGLDGPPGPMGISGLKGDQGFPGQPGLPG RMGSPGEKGDLGRPGLTGPKGEPGLASEKGDKGAPGLPGLTGTDGRPGPEGEKGDKGDNC IPGVGLPGAPGEKGDTGLPGTDGFPGQSGDKGDRGLPGLMGVKGDRGLTGDQGRPGMPGM DGAPGLKGDFGLPGNDGEKGDKGDRGFPGRDGLDGNKGERGLMGPPGIKGPVGFIGFKGD RGLPGPSINIKGDKGDIGLPGIAGATGQKGERGRDGFQGIQGDKGDRGFTGQKGEMGRTG LFGEKGDRGPSGPTGTPGLTIKGEKGLPGLPGKHGRPGLHGAPGEKGEQGLTGLPGQIGR PGTPGLPGPIGEKGDQGREGLAGPPGFDGTPGLNGPPGIPGERGPKGDKGAIGFGLPGAK GDVGVPGIPGAQGEKGDKGERGFDGLTGETGPKGNQGEKGDRGYPGRIGLPGITGDKGDK GEAAAIVYGAKGERGLPGPRGKDGLPGRDGAPGPRGFDGAPGLKGDRGFPGPRGPTGPPG PQGLVGLQGERGEIGRTGSPGLPGAPGAPCTNTDYLTGILLVRHSQTEMIPQCEPGHVKL WDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTNQ PIPMMPVENNEIARYISRCVVCEVPANVIAVHSQTLDIPNCPVGWNSLWIGYSFVMHTGA GGQGGGQALASPGSCLEDFRATPFIECNGEGGTCHHFVDKLSFWLTTIDDNKQFSMPERE TLKSGRLLQRVSRCAVCIKNTTQYRVEY NT seq 5487 nt NT seq  +upstreamnt  +downstreamnt atggcggtccacgtactttggttggtggctgctttggtgttaggaggagtaaaaacgcaa gaagatagttatgaaagaggtgatgtagaagaaaacaatatatacgacaatcaatggccg caaacagattggatttctcaaagcgcatatcaaccaccagcgtctagaacttatggctta tcgagaagacctgatgtcgcggtaccaacgtcaaacccatcaccaccaccgccgccgcca cctcgtcaaagagggagttacggtcaaaattttgccgtttatgatccagtaacccggcag cggacatctgcgatcgaccgcaattgcacagctccgggttgttgtgttcctaaatgcttc gccgaaaagggtaaccgaggtttcccaggcatgcctggggtgcaaggcatgagaggtctt cccggccacgaaggtgcagaaggtcctcaaggtccaaaaggtcaaaaaggtcaatttggt cctcaaggccctcgtggaccaaaaggtgatcgaggtaaacctggtgctcaaggttttcct ggcttagctggccctccgggaccacaaggtgagacgggtgcccctggtattcctggacga gatggttgtaatggaacagatggtgaacctggtttaatgggtccgaaaggtttccaagga cctcgcggattcagcggtcccaaaggagaaaaaggtgacaaaggagaaccagctcatatt ggtcggtatcccaaagggcagaagggtgagccgggaatggatggtatgcatggacctcca ggaccagttggtccaacgggaccgacaggattggttggaccaaaaggaaatactggacca ataggtttacctgggtttaaaggtgacaaaggttctaaaggtttaaaaggacaatcgata caaggcgacaaaggagaccgaggtgacaaaggagacaagggaccaagttgtccatctgaa accttaccttcattagataataaaggtgctattaaaggagttaaaggagacatgggtcca aagggagaaaaaggagaacctggaaaaatgggagacaagggagaacttggacatatgggt gaaccaggtattcctggactcatgggcatcaagggagaaaagggtataagaggcaaccca gggccaagtggtcgccgtggtatgtatggtgaacctggaccaatggggcaaaaaggagac agaggttatgatggtctggctggtctccctggtagacccggtgctaaaggagaacctgga aaagatggtttagctgggccaagaggattgaaaggtgtgcctggaccacctggtggacga atgggatctcgtggccctccaggacctgtaggacccagaggttacacaggacctgctgga ccacctggttcagatgggagacccggagatatgggaatacaaggtcctatgggtccacgt ggaggtcctggtgaaccaggaaaccctggtttagaaggaatgccaggccacaaaggtgaa aagggagaacctggtcttgatggtccacatggtgaaataggcccaagaggatacgatgga cctaccggacctacgggtcctagaggacctaaaggagaagatggactttctatacctggt ttaaagggtactagtggtcagtcgggttatccaggagataaaggtcagaaaggagaaaag ggatatcaaggcttacgtggtgtgcccggtaactcaaccttaggtacccctggcagtcca ggagaaatgggtccaccaggagaaaagggagaaaaaggaactcccggatataacggatta ccgggaagtcctggtcaaaaaggtgacattggaggacactgtaatgattgtagacctggt ggaccaggagctaaaggtgatcgtggcttagatggaatccctggacagcgtggagaacgg ggacctattggtccagtgggagtgccgggagaaagaggatccgatggaatcaatggtgca cctggatcacctggtgccccgggtgaacgaggtgacgatggaccaataggatcgccagga gaaagtggagcgaatgcaattataccatcaaacttagttaaaggccctccaggagaaaga ggatttccaggtgaaaagggtaacatgggtcctaaaggagacagaggtctcgacggacaa ccaggagacagaggactaagtggaatgccaggccaaaaaggtgatacaggtagaatggga ccacctggaattgacggcatccctggggctgatggttcacctgggttaccgggatcgaat ggtatatctattaagggagaaaaaggtttaattggtaatccaggacaaaaaggagataaa ggttttgctggaaggttaggagaaaagggagaaccaggacaatgtcctattgaattgaag gtcttaacaaaaggagaaaaaggttcgcctggtgcacctggaccgcaaggaccgttaggt atgccgggtgaaaaaggagatcgaggtctaccaggtaaaactggtgataaaggagaatca ggattacctggacgtgcaggacctgtaggcgcacgaggtctacctggacttaaaggtgac aaaggagacttaggagcaatgggattccctggaactcaaggcgaagtaggtcctagaggt ttccctggtttgccgggatataagggagataaaggagaagttggagcatctatgcctgga cctccgggacttcctggcttaaaaggagataaaggagattacggacttataggaaaacca ggtattcctggtaacgatggtcctcccggaccaattggcttacagggtgaaaaaggagat ttaggtaatgcagggcgaccaggtcttcctggtgcaccgggactaaaaggtgaacctggt cctgttggccctcctggtataacaggtgttcctggaactcctggaagagatgggccaaag ggacaacaaggatatcctggtttacctggaaaaccaggtaatatgggattacccggtcaa aaaggagagccaggcatgcaaggaccagatggacctaaaggatttcctggaccacgtgga catccaggattacgcggtttaactggagtggacggaagccccggagaaaagggtgataaa ggagaaattggtttcccaggattacctggagaacgaggtctcgatggaccaccaggacca atgggtattagtggtttaaagggtgaccaaggttttccgggccagccagggcttccaggt cgaatgggtagcccaggagaaaagggtgatttgggtcgcccaggtttaactggaccaaaa ggtgaaccaggtttggcttcagaaaagggtgacaaaggagcacctggattacctggatta actggtacagatggaagacctggtccagagggagaaaagggtgataaaggtgacaattgt atacccggagttggtttaccaggagcaccaggagaaaaaggtgatacgggattacctggt acagacggttttccaggtcaaagtggagataaaggagaccgtggtttacctgggctaatg ggtgttaaaggtgacagaggattaaccggagatcagggacggcctggtatgcctggaatg gacggtgccccgggattaaagggtgactttggattacctggaaatgatggtgagaaagga gacaaaggtgatagaggtttccccggacgtgatggtctcgacggcaataaaggcgaacgt ggattaatgggcccaccaggaatcaaaggacctgtaggttttattggattcaaaggagac cgaggattacctggtccatcaataaacataaaaggagacaaaggagatattggtttaccg ggtatcgctggtgctacaggccaaaagggtgaaagaggtagagatggattccaaggtatt cagggagacaaaggtgatcgaggatttacaggacaaaaaggagaaatgggcagaacaggg ttattcggtgaaaaaggtgatagagggccatcgggtccaacaggcacgccaggacttaca ataaagggagagaaaggtttacctggtttaccaggtaaacatggaagaccaggcttacat ggcgccccaggagaaaagggagaacaaggtttgactggcttgccaggacagattgggcga cctggaacacctggccttcctgggccaattggagaaaagggcgatcaaggtagagagggt ctagcgggcccacctggtttcgacggaactcctggattgaatggacctcctggtatccct ggtgaaagaggaccaaaaggtgacaagggggcaatcggttttggattaccaggtgccaaa ggagacgtaggcgtgccgggaattcctggagcacaaggagaaaaaggtgacaaaggagag cgtggttttgatggacttacaggagaaacaggacctaaaggtaatcaaggtgagaaaggt gatcgtggataccccggcagaataggattacctggaataacaggagataaaggtgacaaa ggagaagcagcggctattgtgtatggtgctaaaggagaacgtggacttcctggacctcgc ggtaaagatggtctccctggacgtgatggggcacctgggcctcgaggttttgatggcgcc ccaggattgaaaggtgatagaggttttccaggaccaagaggaccaacaggtccaccaggt cctcaaggcttagtaggtttacaaggtgaaagaggtgaaataggacgaacaggatcgcca ggattgcctggtgctccaggggcaccttgcactaatactgattatttgacaggaatactc ttagttcgtcatagtcaaactgaaatgatacctcaatgtgaacccggccatgtgaaattg tgggacggatattctttactttatattgatggcaacgaaaaagctcataatcaagactta ggttatgctgggtcatgtgtaagaaaattcagtactatgccattcctattctgtgatctt aatgatgtttgtaattatgctagtagaaacgaccgaagttactggttatcaacgaaccaa ccgatacctatgatgcccgtggaaaataatgaaatcgctcgatacatttcgaggtgtgtt gtttgcgaagtaccggccaatgttatagctgtccacagccaaactctggatataccaaac tgtcctgtgggatggaattccctttggatcggctacagttttgttatgcatactggagct ggtggacaaggtggtggccaagctctagctagtcctggttcctgtcttgaagatttccgt gccacacctttcatagaatgtaatggtgaaggtggtacatgtcatcacttcgtcgacaag cttagcttctggctaacaactattgacgataataaacaattctctatgcccgaacgcgaa accttaaaatcaggaaggctcttgcaaagagtttctagatgtgcagtttgcattaaaaat actacacagtatcgagttgaatattag

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