KEGG   Vanessa cardui (painted lady): 124531247
Entry
124531247         CDS       T09161                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124531247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcd03019]
    124531247
   03036 Chromosome and associated proteins [BR:vcd03036]
    124531247
Messenger RNA biogenesis [BR:vcd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     124531247
Chromosome and associated proteins [BR:vcd03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     124531247
    COMPASS/SET1 complex (yeast)
     124531247
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_EML Beta-prop_TEP1_C Beta-prop_NOL10_N WDR90_beta-prop_4th DSE1_N Beta-prop_RIG_2nd Beta-prop_WDR75_1st CFAP251_N WD_LRWD1 Beta-prop_WDR19_1st Beta-prop_VPS8 PAC11 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Vps41 MIOS_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 TRM82_WD MinC_C DUF6731
Other DBs
NCBI-GeneID: 124531247
NCBI-ProteinID: XP_046961701
LinkDB
Position
7:7322110..7323719
AA seq 315 aa
MMKLVDQVVRSFKVAKVFRENTDKINSIDFSPTGETLISCSEDDQIVIYDCEKGTQMITV
NSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLCLSPVE
DTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSF
DKGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTNGSIIRLVDAYHGTPLQTFTGHLNNK
GIPIEASFSPDSQYIFSGSTDGRVHVWNADTGYKVCVLNGDHPAPIQCVQFNPKYMLLAS
ACTNMAFWLPTIDDV
NT seq 948 nt   +upstreamnt  +downstreamnt
atgatgaaactagttgaccaagttgtgaggagttttaaggtggcaaaggtgtttcgagaa
aatacagacaaaataaacagtatagatttctcaccgactggtgaaactctaatatcctgc
agtgaagatgaccaaattgttatttatgactgtgaaaaaggaacacaaatgataactgtt
aacagcaaaaagtatggcgttgatcttatacatttcacacacgctaaaaatacggccatc
cacagttcgacgaaagtggatgatacaataagatatttgtcactccatgataacaaatat
atcagatactttcctggacacaccaagaaagtagttactttatgcttatcaccagtggag
gacacatttttatctgggtctctagataaaactttacgtttatgggatttgcgttctcca
aattgtcaaggtttgatgcacttgtcaggaagacctgtagctgcatatgatccagaaggc
cttatatttgcagcaggtgtaaactcagaaagcatcaaattatatgacttaagatcattt
gacaaaggtccatttgtaacatttaaattaaatcaagagaaagaatgtgattggaccggg
ctaaagttttctagagatggtaaaacaatgcttataagtacaaatggttcaataatcaga
ttagttgatgcttaccatggtacaccattacaaacatttactggtcatcttaacaacaaa
ggtattcctattgaggcatcattcagtccagactcacaatatatattcagtggctcaaca
gatggaagagtacatgtttggaatgcagacaccggttataaagtttgtgtgttaaatggc
gaccatccagctcctattcagtgtgttcagttcaatccaaaatatatgttactagcatca
gcatgtacaaatatggccttttggctcccaacaatagatgatgtttaa

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