KEGG   Vanessa cardui (painted lady): 124531404
Entry
124531404         CDS       T09161                                 
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd04137  Mitophagy - animal
vcd04144  Endocytosis
vcd04145  Phagosome
vcd04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    124531404
   04145 Phagosome
    124531404
   04137 Mitophagy - animal
    124531404
   04148 Efferocytosis
    124531404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:vcd04131]
    124531404
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vcd04147]
    124531404
   04031 GTP-binding proteins [BR:vcd04031]
    124531404
Membrane trafficking [BR:vcd04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    124531404
 Endosome - Lysosome transport
    124531404
Exosome [BR:vcd04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124531404
  Exosomal proteins of other body fluids (saliva and urine)
   124531404
  Exosomal proteins of colorectal cancer cells
   124531404
  Exosomal proteins of melanoma cells
   124531404
GTP-binding proteins [BR:vcd04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    124531404
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 124531404
NCBI-ProteinID: XP_046961938
LinkDB
Position
7:complement(1390776..1418178)
AA seq 213 aa
MATNRSGAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTLCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFGRAKNWVKEL
QRQASPSIVIALAGNKSDLAAKRMVEFEEAQAYADENGLLFMETSAKTAMNVNDIFLAIA
NKLPKSESAGGGAAGGARRLNDADAPRASSCCK
NT seq 642 nt   +upstreamnt  +downstreamnt
atggcaacaaacagaagcggtgcggctcaaaggccgaacggcgcgccacagactaaggtg
tgccagttcaaactggtgttgctgggcgagtccgcggtcggtaaatcgtcgctagtgctg
cggttcgtcaagggtcagttccacgagtaccaggagagcaccatcggcgccgcgttcctc
acgcagacgctgtgcctcgacgacaccacggtcaagttcgagatatgggatacggcgggg
caggagaggtatcacagcttagcgcccatgtactacaggggggcgcaagcggcgatcgta
gtatacgacatcactaatcaggacacattcggtcgcgccaagaactgggtaaaggagctg
cagaggcaggcgtctccgtccatcgtgatcgcgctggcgggcaacaagagcgacctggcc
gccaagcgcatggtggagttcgaggaggcgcaggcctacgccgacgagaacgggctgctc
ttcatggagaccagcgccaagacggccatgaacgttaatgatatattcctagctatcgcg
aacaagttaccaaagagcgagagcgcgggcggcggcgcggcgggcggcgcgcggcgcctc
aacgacgccgacgcgccgcgcgcctcgtcgtgctgcaagtga

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