Vanessa cardui (painted lady): 124531413
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Entry
124531413 CDS
T09161
Name
(RefSeq) transcription factor Sox-21-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124531413
Transcription factors [BR:
vcd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124531413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
124531413
NCBI-ProteinID:
XP_046961955
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All DBs
Position
7:complement(13880548..13928881)
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AA seq
347 aa
AA seq
DB search
MSAAGAMCDRAGYGGTMGHFPMGHMSAMGAIGTMGAISAMNGQTHQKKSQEEHIKRPMNA
FMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEDEKRPFIDEAKRLRAMHMKEHPD
YKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAGMAGGGMTQAMGGYYGAAYGPLGASMA
AAAAAAAQQNAISAALTPNAQVGSTMDMSKYSIEDKYRSYSMYPDPSRGYLDSAALSKAY
MYMDQQQQRSYPMDISKMYSDASVAMAGLTSTVNSASSLSPRSPAESPDTQKTQDRAEGS
SSSGSNPSPSLPYYQTSSSLLMPQYPGQYPQSTQGGPEFRRPLTVIF
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgctggtgcaatgtgcgaccgggctggatatggaggcaccatgggtcatttt
ccaatgggccacatgtcggctatgggagctattggtacaatgggagcgatatccgccatg
aacggacagacgcatcagaagaaatcccaagaagaacatataaaacgacccatgaatgcc
tttatggtgtggtcgaggctgcaaaggcggaaaatagcacaggataatcccaaaatgcat
aattctgagatttcaaaaagattaggtgccgagtggaagcttctaacagaagatgaaaag
agaccgttcatcgatgaggccaagaggctcagggcgatgcacatgaaggaacatcccgac
tacaagtaccgaccgcggaggaaacccaagaccctgaggaaggagggatacccctactcc
attccctatcccagtgtgcccatggacgccttaagagctggaatggccggtggtggtatg
acacaagcgatgggcggctactacggcgcagcatacggcccgctcggagccagcatggca
gccgccgccgctgcagctgcacaacagaatgccatatcggcggcactcacaccaaatgct
caggtgggctcgacgatggacatgtctaagtattcaatcgaggataagtacaggagctac
agcatgtaccctgacccgtcgcggggatacctcgattcagccgcgctctccaaagcgtac
atgtacatggaccagcaacaacaacgctcctacccgatggacatcagtaagatgtactcg
gacgcttcagtcgccatggctggtctcacttcaacggttaattcagcgtccagcttatcc
ccgaggtcccctgctgaatccccagacacccaaaagacccaggaccgcgctgaaggcagc
tcctcgtcagggtcgaatccgtccccatctctaccctactaccagacctcgtccagcctc
ctcatgccccaatatccgggtcagtatccccaaagcacgcaaggcggcccggaatttcgg
agaccgttgactgtcatattctga
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