Vanessa cardui (painted lady): 124531433
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Entry
124531433 CDS
T09161
Symbol
RtGEF
Name
(RefSeq) rho-type guanine nucleotide exchange factor isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124531433 (RtGEF)
Membrane trafficking [BR:
vcd04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124531433 (RtGEF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
PH
SOS1_NGEF_PH
TcdB_N
Motif
Other DBs
NCBI-GeneID:
124531433
NCBI-ProteinID:
XP_082788086
LinkDB
All DBs
Position
7:complement(7786140..7801519)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSTENCLVKAIYSFKGKNNDELCFKKGDIITVTQKEEGGWWEGTLGETTGWFPSNYVTEY
KDTSGSITTSPIRAASEIQAFRNVVLKDIIDSEKAHVAEMQGLVSNFLHPLEESDMLTKD
EFKQLTGNINEVLQVHEQFLDLLEECAMKTGPDQRVGGLFLQWAPKIKAVHQIYCAGHPK
AVCILDKYKEELNTWMENAGAVCPGVLVLTAGLSKPFRRLGKYPAMLQELARHVHEAHPD
RGDTHRASIVYKDIASGCAALRRQKELELQVVTGEVRGWPGGELTSLGDVLHMGSVAVGP
SHQDRYLVLFPSALLLLSVSKRVSAFVYEGCLPLTGITVCKLDDTETRKNAFEISGPMID
KIVAVCQTRAEADNWVSLLQKHSNNSSPTHESAQPQSLPHLTRSPSEGALSSINSSRRSL
YHVTLPPSSYPSASPYYSLTKYFARLVKKKVITRQMLRKLLHEKTWAKALELTGLPVMRR
HKNLIKLKIENDGTIATDTEYSNSDRDSDDSDREIESYSNSSCTDAEVSSSSKITRQNAI
DSIGPRTISSSGSSWGSNFGYVRYFDSSTDMQFDLPQSKIKGDCTKKIFMSEPSNTSTEN
MSANLLDYNLQRSSRGNNLNIRNHVKHSDSAENSSFEVRNYMGCEDLVNMDQNTQMGNLV
NDETDFIATRRSFPNFSARNDMVPKLWKSAEERCSYEDEYNNNIVMSDLLQVLDPPSPKY
SRDYPIDSIIIEPPPMFRNEDEDLKIINVNLNANIPFRKHSLNSDKRIRRSMSRSMVETE
NKKNNNAHLERMSSQSETSKSRRKCECCNRSLCPSPRSSDSGVAGSCNLASPELNMHGND
SDSHDKTSDDLKDSLNNLSENTFENRRLSLSEIEAATFEEQCRCTSPFGSTARTSCVTSV
TSETSFDVKDLSNTNVKSTFVASPPLSSAQIKRTSIRRNIERYVPEIKIKPEVPPRVYRK
PSTHIEVPKNVRQPIPCQWSTLNITERTKPSLHYHMRIYREKPDENINRRSRKDMSRKCD
VYRKENEDKDEKTSLMSQKSRSRSEDMSKTQKTGFMVYRSDLYAHWWMKAKLPITVVTDS
DGHERQQ
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgagaattgcttagttaaagcaatatattcattcaagggtaaaaacaatgat
gagctatgcttcaaaaaaggtgacattatcactgtcactcaaaaagaagaaggaggttgg
tgggaaggcacactgggagaaacgacaggatggtttcctagtaactatgttacagaatat
aaagacacctctggctccataactacttctccaataagagcggcttcggagatccaagct
tttagaaatgttgtactcaaggatatcattgattctgaaaaagctcatgtagctgagatg
cagggcttagttagcaactttttacatcccttggaagaaagtgacatgctgactaaagat
gagttcaagcagttaacaggaaatattaatgaagtgttacaagtgcatgaacagtttctt
gatttattggaagaatgtgcaatgaagacagggccagaccaaagagtcggtggcctgttc
ctgcaatgggcacctaaaataaaagcagtgcaccaaatatattgtgctggtcaccccaag
gccgtctgtatacttgataagtacaaagaagagcttaatacatggatggaaaatgcaggg
gcagtttgtccaggagtactggtacttactgctggtctatcaaaaccattccgacgtctt
gggaaatatcctgcaatgttgcaggaattggccaggcatgtgcatgaagctcatcccgat
agaggggatacacatagagcttcaattgtatataaagatatagctagtggttgtgcagct
ttaagacgccaaaaagagcttgagcttcaagtggtaacaggagaagttcgaggctggcca
ggaggtgaactaacctctcttggtgatgtacttcacatgggcagtgtggcagttggtccc
tcccatcaagaccggtaccttgtactcttcccatctgccctgcttcttttgtcagtcagt
aaacgtgtgtctgcatttgtttatgagggatgtcttccactaactggtattacagtttgc
aaattagatgatacggaaacaagaaaaaatgcatttgaaattagtgggccgatgattgat
aaaatagttgcagtctgccaaacaagggctgaggccgacaactgggtcagtttacttcag
aaacactccaataatagcagccctactcacgagtctgcccagccacagtccttaccacat
ttgacccgttctccctccgaaggggcgctgtctagcatcaactctagtcgacgtagtcta
tatcatgttacgctcccgccgtctagttacccttcggcctcaccatattactctctcaca
aaatattttgcgagactcgttaagaaaaaggttataacgcggcaaatgttgcgtaaactt
ttacacgaaaaaacatgggcaaaggctctcgaacttacaggtttgccagtaatgcgaagg
cataaaaatctaattaaacttaaaatagaaaatgatggtacaatcgcaactgacactgaa
tattcaaacagtgacagagattcagatgatagtgatagagaaattgaatcttattcaaat
tcgagttgtacggatgctgaagtcagtagctcgtctaaaataacgaggcaaaatgccata
gatagtattggtcctagaacaatatcttcgtccggtagcagttggggcagtaactttggt
tatgtccggtacttcgattcttctacagacatgcaattcgatctgccacagtcaaaaatt
aaaggtgattgtacaaagaaaatattcatgtctgagccctcgaacacaagtaccgaaaat
atgagtgctaatttactagattataatttacaaagatcatcccggggtaataacttaaat
attcgtaaccatgtaaaacattccgatagtgcagagaattctagttttgaagtaaggaat
tacatgggttgtgaagatttagtcaatatggatcaaaatacacagatgggtaacttagtt
aatgatgaaactgattttattgcaacaagacgaagcttcccaaattttagtgcacgtaat
gatatggtccctaaattatggaagtccgctgaagaaaggtgttcatatgaagatgaatac
aataataatattgttatgtcagatttgctgcaagttctggatcctccctcacccaaatac
agtcgtgattaccctattgattcaataattatcgaaccgcctcctatgttccgcaatgaa
gacgaggatttgaaaataataaatgtcaatttgaatgcaaatataccctttcgtaagcac
tcgctcaattccgataaaagaattagacgatctatgtcgagatctatggtggaaacggag
aataaaaagaacaacaatgcacacctagaaagaatgagttctcaatcggagacttcaaaa
tcacgtcggaaatgcgaatgttgcaatcggtctctatgtccaagtccccggtcttcagat
tctggagttgcagggagttgcaatttagcatcgcccgaattaaacatgcacggcaacgat
tccgacagtcatgataagacgtcggacgatttaaaggactctctcaataatttgtcggag
aatacatttgaaaatcgaagattgtctctatcggaaatcgaagcggccacatttgaagag
cagtgccgatgtacatcacctttcggctcaactgctagaacttcatgcgttacaagcgta
acttcagaaaccagcttcgatgttaaggatttatcaaatacgaacgttaaatccactttc
gttgccagccctcctttgtcttcggctcaaataaaaagaacatctatacgtaggaacatt
gaacggtatgttcctgaaattaaaatcaaacctgaagttccaccacgagtttatcgaaaa
cccagtactcacatagaagttcccaaaaatgttcgccagccaataccatgccaatggagc
actttaaacataaccgaacgcacgaagcctagcttgcattaccacatgcggatatacagg
gaaaaaccagatgaaaacatcaatagacggtcaagaaaagatatgtcacgtaaatgtgat
gtttatagaaaagaaaacgaggacaaagatgaaaagacttcgttgatgtctcagaaatct
cgctcacgtagcgaagacatgtcgaaaacgcaaaaaactggctttatggtgtatcgttca
gacttatatgcccattggtggatgaaagccaaattacccattaccgtggtcaccgactca
gatggccatgagcgacagcagtaa
DBGET
integrated database retrieval system
