Vanessa cardui (painted lady): 124531453
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Entry
124531453 CDS
T09161
Name
(RefSeq) transcription factor Sox-14
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124531453
Transcription factors [BR:
vcd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124531453
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
TFIIA
Motif
Other DBs
NCBI-GeneID:
124531453
NCBI-ProteinID:
XP_046961996
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Position
7:4835458..4837403
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AA seq
374 aa
AA seq
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MLTMETDLKGGSLHATVPPHHALQHGYGSLGALGGMMSLPQQQPLGQHQQLQHHQHQPLP
QHHTQPQQQHHQPPNNNNNNSSKNSNAERVKRPMNAFMVWSRGQRRKMASDNPKMHNSEI
SKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLAKKQEKYPLGGG
ALLGAGDAQRTAAPTAQQPRDVYQMAPNGYMPNGYMMHDPSAYQQQAYGYPRYDVSQMQQ
GGYGGGYYGGGQGSPYLPQPPSPSAYGLGPGSPGGYALPASCASHSPSGSSAKSEPVSPG
PPGLKREYVSHEPPTQLKREFGGHGHLSSQSHPHEQLAMKREYGQQDLSHIINMYHVPDE
QRYAAAGERAMPLI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgatggagacggatctaaagggcggcagcctacatgccactgtgccgccgcac
cacgcgctccaacacggttatggatcgctaggcgcgctcggcggcatgatgtcgctgcct
cagcagcagccgctgggccagcatcaacagcttcagcaccaccaacaccagccgttgcct
cagcatcacacgcagccccagcagcaacaccatcagcccccgaacaacaataacaacaac
tccagtaagaactcaaacgcagaacgggtaaagcgcccgatgaacgcgttcatggtgtgg
tcgcgtgggcagcgcagaaagatggcttcggataatcctaagatgcacaactctgaaatt
tcaaaacgtttaggtgctcagtggaaagacctctcagaatctgagaagcgaccgttcatc
gacgaagcgaagaggcttcgagctgttcacatgaaggaacacccggattataagtacaga
ccaaggagaaaaacgaagaccctcgctaaaaaacaagaaaaatatccattgggaggtgga
gcgttactgggagcaggtgacgctcagagaacagccgcaccgacggcacagcagccgcga
gatgtgtatcaaatggcgccaaacggatacatgcccaacggatacatgatgcacgacccc
agtgcttaccagcaacaggcgtatgggtacccgcgctacgacgtgtcccagatgcaacaa
ggcggatatggaggcggctactacggtggaggacaaggatcgccatatctgccgcaacca
ccatcaccttctgcgtacgggctgggtcccggctcgccgggcggctacgcgctgccagct
tcttgcgcctcacattcaccgagcggctcgtcagccaaatcggaaccagtgtcgcccgga
cccccaggattgaaacgcgagtacgtgtcgcatgagcctccgacgcagttgaagcgcgag
ttcggtggccacgggcacctgtcctcgcagagccacccgcacgagcagctagccatgaag
cgcgagtacgggcagcaggacctgagccacatcatcaacatgtaccacgtgcccgacgag
cagcggtacgcggccgccggcgagcgcgccatgccgctcatctga
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