KEGG   Vanessa cardui (painted lady): 124531719
Entry
124531719         CDS       T09161                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03420  Nucleotide excision repair
vcd03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124531719
   03460 Fanconi anemia pathway
    124531719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcd03032]
    124531719
   03400 DNA repair and recombination proteins [BR:vcd03400]
    124531719
DNA replication proteins [BR:vcd03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    124531719
DNA repair and recombination proteins [BR:vcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124531719
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 124531719
NCBI-ProteinID: XP_046962187
LinkDB
Position
8:complement(13093173..13108520)
AA seq 880 aa
MESTEQSDVDQNIETKYPLLPYEKQILMDMFEKDALLIIAKGLTYNDIVANLLWIHNDPA
NLVLVINSSEYEEKYFSEKFNLTVLPTIGNEREKAYLEGGIYFVSTRILVVDLLKNRVPV
TSITGIIVLRAHTVLESCQEAFVLRLYRQKNKTGFIKAFSNSPISFTFGYHQVEKVMRAL
FVTELFLWPRFHSTVIKSLKSRQAEVIELHVSLTTNMGLIQTCLLDIMNYTVKQLKSINR
TLDMQEITTENCITKKFHKILQSQLDCVWHQLSTRTKEYIQDLKVLRTMIINLIHDDSVS
FYALVSKYRTPEYAKVNSGWILLDSAEQLFRLAKARVYNNNNEFNPESSPKWKCLSELLT
DEIPKDVKEKNESLSRTKILILCQDNKSCYQLNNYLTMGESKYLFYTAFRRDLTITSMAA
KYKKINNKTQMKTENKDKEIKNELDEEANAEEMNKSSYVLTLTQTATKDNSGSKAANESI
FEPLSQVETLDLTQIETDKPIICIQTFKQNGNYMSLSETLESLRPQYAVLFHSDVAAVRQ
LERHECRRPQAEPRLRVYFLVHDHTVEEQAYLTALRREKQAFELLIQAKSVMVIPSYQDG
KTDEYFNMNVEEEVIHKDTRKAGGQTQVTKEKPVVIVDMREFRSDLPALLHKNGINIEPV
TISIGDYILTPDICVERKSLSDLIGSLNSGRLFAQCTHMCRNYSRPILLIEFDQNKPFHL
QGNFVVSTDLSGADIQQKLQLLTIHFPRLKLVWSPSPYATAELFYELKQGRKNPNVEEAL
ALSGDNTADDMNYERCNIRVHDFVQKLPGITSKNITRVMNRGVSLDHLITLTQDQLAEIM
ENKNEAATLYSILHVKPKTTETDKAKPFGKKKFEKFKNLK
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggagagtaccgaacaaagtgatgtagatcaaaatatagaaacgaaataccctctgctt
ccctatgaaaaacaaatccttatggatatgttcgaaaaggatgcacttttaataattgca
aaaggtctcacttataatgacatcgtcgcaaacttattatggatacataatgaccctgcg
aatttagttttagtaataaacagtagtgagtatgaggaaaaatatttttctgaaaagttt
aatttaacagttttacctactattggaaatgagagggaaaaagcatacttagaaggtggt
atatactttgtgtcgacaagaattttagttgttgacttgttgaaaaatcgtgttccagta
acgagtattactggtataattgtattaagagctcacactgtactggaatcatgtcaagag
gctttcgttttaagactttatcggcaaaaaaataagactggatttattaaagcattttca
aattcaccaatttcatttacttttggatatcatcaggttgagaaagttatgagagctctc
tttgtaacggaactgtttctgtggccaagattccacagtaccgtgataaaaagtcttaag
agcaggcaggcagaagttatagaattacacgtttcactgaccacgaatatgggtctaatt
caaacttgtttgcttgatatcatgaactacacagttaagcaattgaaaagtattaatcga
acactggacatgcaagaaataacgaccgaaaattgtatcacaaagaaattccataaaatt
cttcaatcacaattggattgcgtgtggcaccaactcagcacaaggacaaaggaatacata
caagatttaaaggttttaaggacgatgatcataaacttaatacacgacgattcagtttca
ttttacgcattggtaagcaaatataggacacccgaatacgctaaagtcaattctggatgg
atactccttgactcggcggaacagctgtttaggctggccaaagcgagggtgtacaacaat
aacaatgaattcaatcctgaatcgtcaccaaagtggaaatgcctgagtgaattgctaacg
gatgagatacccaaagatgtaaaggaaaagaatgagtcgctatctagaacaaaaatactc
atactctgccaagacaataagtcctgttatcagctaaacaattacctcaccatgggtgaa
agtaaatacctcttttataccgcattccgaagagatttaacaataacatcaatggctgct
aaatataagaaaataaataataagacacaaatgaaaactgaaaataaagataaggaaatt
aaaaatgagttagatgaagaagcgaatgcagaggaaatgaacaagtccagctatgtcctg
actctgactcaaacggctaccaaagacaattcgggatcaaaagcagctaatgagagcata
tttgaaccgctgtcccaggtagagaccttggatttaactcaaatagagacagacaagcca
ataatctgcattcagacgttcaagcagaacggcaactacatgtcgctcagcgaaacgctg
gagagcctgcggccgcagtacgcggttctgttccacagcgacgtggccgccgtccgccag
ctggagcgccacgagtgccggaggccgcaggccgagccgcgcctcagggtctacttcctg
gtacacgaccacaccgtcgaggagcaggcctacctcacggccctgcgacgcgagaagcag
gccttcgagctgctcatacaggccaagagtgtaatggttataccatcatatcaagacggc
aaaactgatgaatattttaatatgaacgtggaagaagaagtcattcacaaggatacgagg
aaagcaggcggacaaactcaagtcacgaaagagaaaccggtcgttatcgtcgatatgaga
gaattccgttccgatctccctgccttactacataagaacggaatcaatattgaaccagtg
accatatccataggcgactacatcctgacgcccgacatctgcgtggagcgcaagtctctg
tcggacctcatcggttcgctcaactcgggccgcctgttcgcgcagtgcacgcacatgtgc
cgcaactatagccggcccatcttgctcattgaattcgaccagaacaagccctttcattta
cagggtaattttgtcgtttcaaccgatttatccggcgccgatatccagcagaagcttcag
ctgcttacaatacactttccgaggctgaagctcgtttggtcaccaagtccttacgctaca
gcggaattgttttatgaactcaaacaaggtagaaaaaatccgaacgtagaagaggcgctg
gctctgagcggagacaatacagccgatgatatgaattatgagagatgtaacatacgcgtg
cacgacttcgtacaaaagctgcccggcattacgtccaagaacatcactagagttatgaac
agaggagtctctttggatcacctcataaccttaacgcaggaccaactagcagaaataatg
gaaaacaaaaatgaagcggcaactctgtattccattctacacgtcaaaccgaaaacgacg
gagactgacaaagcgaaacccttcgggaagaaaaagttcgagaaattcaaaaatttgaaa
taa

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