Vanessa cardui (painted lady): 124531838
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Entry
124531838 CDS
T09161
Name
(RefSeq) ATP-dependent DNA helicase Q5-like
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcd03400
]
124531838
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124531838
DNA repair and recombination proteins [BR:
vcd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
124531838
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
SRI
AAA_22
Motif
Other DBs
NCBI-GeneID:
124531838
NCBI-ProteinID:
XP_046962334
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All DBs
Position
8:complement(4848098..4853980)
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AA seq
1153 aa
AA seq
DB search
MDNVTEKLLQCFGYRKFKSELQERAVRAIARGVHDVYVSMPTGSGKSLCFQLPAMLQDNK
VAIVFSPLLALIKDQIDHLTRFKIPAESINSKMTSKDRDRVLNDLHSMKPTTRFLYVTPE
QAATGTFKALIEHLVKYKKVSYIVVDEAHCVSEWGHDFRPDYLKLGNLREKFKSIPWVAL
TATASAEVTKDIMTNLKFLQPVAQYKTPSFRRNLFYDVVYQNCIQDEIGDLVEFLKKNLK
DDDNVKMKDKSAAIVYCRTREQTEDISSMLTKRGFKSLAYHGGLKTSERVSVQEQWSNGE
CPCVCATVSFGMGVDKATVRVVVHWGLPQNVAAYYQESGRAGRDGKPAFCRIYYCRSERN
AVDFLLKSEMGRSKTPEQKQRCKNAYKSFEIMVKYCEEVRCRHKTFADYFGEQAPNCGAR
CDACADPRAVQRALDQHQRRAMSATLGQRGLVTHADSSDLYGEGRLGQMREAESYYGEKS
GDDSDDESSRRRVAEETKSLILQEFAKRKKDVEKSKNNDTESAKYSKCKAADSTVTKVNG
LTVAGRESYLALLTDALRNNLKNSKDIDKTDKNLSGRDIEQCAIEMEYEAFSSSTVASLY
RRAMAKVISSVKSCKDSLYPDLKNYEPKKSNTLGEFIKDYEKNRADQKDHGFITASELES
RDKASKNDQKILSKADKDTKRKANSFKRDPLTQTKLNNFFSKTSQESPSLPSDDSEDDIG
LVIAENESPKHSDSTFKLEEVDDTNNAEDNDKTLKLDTVAEDQNSDTNTKTKTLYINITL
QGIPKNESDSKNKVGEDVDTKFEKKIKHASSEKANPIAKRKIKALFGESSDSEVEPNDIK
KRKISKDRSVSHKSENKKNEKSKPERSKKRHKRKKSHQNDEKSSENNDSTGKDSAFEETL
ILDDATSAATCTESQSNENDINTSMEEYPESHNSFDSMNEDTKSSDVNKVKFVDEKSIVK
AHKLSLEADKVLQELKHFSEIKSEPEITVPINVTAVDDAKVCESKNTVVITKSPTKHGTK
EKHDPKSTDDLKHIKTHNKHEKKEHSKSTEKRDISKKIDISKKIQHSKHKEKKAEKVDVA
SLVVKLLMPYYKKKKISNRDLFKITARHIVHQLLAIQVTEEAAINMILKKTFSKVTIEKE
SDLEAKLNLSNNT
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggataacgtaacagaaaaattactccaatgttttggttacagaaagttcaaaagtgaa
cttcaagaaagggctgttagggcaattgcaagaggggtccatgatgtatatgtatcaatg
cccactggttcagggaagtctttgtgcttccaattaccagcaatgttgcaggacaataaa
gtggccattgtattttcacccttactggctctaattaaagatcagattgatcacttaaca
aggtttaagatcccagcagaatcaatcaactccaaaatgacatcaaaagacagggataga
gttttgaatgatttacacagcatgaaaccaaccacaaggtttttatatgtaacaccggag
caagcagctacaggcacttttaaagctctcatagagcatctagtcaagtataaaaaagtt
tcatatatagttgttgatgaggcccactgcgtcagtgaatggggccatgatttccgacct
gattatttgaaattaggtaatttacgtgaaaagtttaagagcattccatgggttgctctc
acggctacagcaagtgctgaagtcacaaaagatataatgacaaaccttaagtttctgcag
ccagtagcacaatacaaaacacctagttttagacggaatctcttttatgatgtagtgtat
caaaattgtatacaggatgaaattggagatttggtagagtttctaaagaagaacttaaaa
gatgatgacaatgttaaaatgaaagacaaaagtgcagctattgtgtattgtcgaacacgg
gaacaaacagaagatatatcgagcatgttaacgaaaagaggttttaaatcattagcttat
catggaggattaaaaacctcagagcgcgtgtcagttcaagagcaatggtcgaatggtgaa
tgtccttgcgtgtgcgccaccgtatccttcgggatgggtgtggataaggcaacagtacgc
gtcgtggtccattggggtctgccgcagaatgttgccgcttactatcaagagtcgggaaga
gcgggaagagacggcaaaccggcattttgtcggatatactactgtcgaagcgaacgaaat
gccgttgatttcttactcaaatccgagatgggtcgctctaaaacacccgagcagaagcaa
agatgcaaaaacgcctacaagagtttcgaaatcatggtcaaatattgcgaggaagtgagg
tgccggcacaaaacgttcgcggactacttcggcgagcaggcgcccaattgcggcgcgcgc
tgcgacgcatgcgcagacccgcgcgccgtgcagcgcgcgctcgaccagcaccagcgccgc
gccatgagcgccacgctcggccagcgcggcctcgtcacgcacgccgactcctctgacctc
tacggcgagggccgcctggggcagatgagggaggcggagtcgtactacggagagaagagt
ggggatgactcagacgacgagagtagtagacgtcgcgtcgctgaggagactaagtcacta
atattgcaagagtttgccaagagaaaaaaggatgttgaaaaaagtaaaaataacgatact
gaatccgcaaaatattccaaatgcaaagcggctgacagtacagtaacgaaagttaatgga
ctcacagttgcaggacgggagagttatcttgccctactcacagatgcgttaagaaacaat
cttaagaattcaaaagatatcgataaaacagataaaaatctttcgggacgggatattgaa
caatgcgcaatagagatggagtatgaagcattttcaagtagtactgtagctagtctgtac
aggcgagcgatggcaaaagtgatatcatctgtcaaatcttgtaaggacagtttgtatcca
gatctcaaaaattatgaacccaaaaaaagtaatacgcttggtgaatttataaaggactac
gaaaagaatcgcgccgatcaaaaagatcacggttttattactgcatcagaattagaaagt
cgtgataaagcaagcaaaaatgatcaaaaaatactatctaaggccgataaggacactaaa
agaaaagcaaactcatttaaaagagatcctttaacacagacaaagctaaataactttttc
tcaaaaacatcacaagaatctcccagtttaccgtcagatgacagcgaagatgacatagga
cttgttatagcagaaaatgagagtccaaaacatagtgattccacatttaaattagaggaa
gttgacgatacaaataatgcagaagacaatgacaaaacgctcaaattagacacagtagcc
gaagatcaaaattccgatacaaatacgaaaacaaaaaccttgtacataaatataactcta
cagggaatacctaaaaatgaatcagatagtaaaaacaaagtgggtgaagatgtcgataca
aaatttgaaaagaaaattaaacacgcgtcttccgaaaaagcaaatccaatagctaaaaga
aaaatcaaagctctttttggcgagtcatctgacagtgaagtcgagccaaatgatattaaa
aaacgtaagatttctaaggacagatctgtatctcataagtcggaaaataagaaaaacgaa
aaatcaaagccagaaaggtctaagaaaagacataagcgtaaaaagtctcatcaaaatgat
gaaaagagctctgaaaataacgacagtactggtaaggatagtgcttttgaagaaacgctt
attttagatgacgcaacaagtgcagcgacatgtacagaatctcaaagtaacgaaaatgat
attaatacaagcatggaagaatatcctgagtcacacaattcctttgattcaatgaatgaa
gataccaaatcaagtgatgtaaataaagtaaaatttgttgatgaaaagtctatagttaaa
gcacataaattaagtttagaagcagataaggtattacaggagctaaaacatttctcggaa
ataaaatccgaaccagaaataacggtcccaattaatgttactgctgtcgatgatgctaaa
gtatgtgaatcaaaaaatacagttgtgataacgaaatctcccacaaagcacggaactaaa
gaaaaacatgatccaaaatcaacggatgatttaaaacatattaaaacacataataaacat
gagaaaaaagaacatagtaaaagtacagaaaaaagggacatatctaaaaagatagacata
tctaaaaagatacagcactccaaacacaaagaaaagaaagcggaaaaagtggatgttgcg
agtttagttgttaaactgttgatgccatattacaaaaagaaaaagatcagcaatcgcgat
ttgttcaagattactgccaggcacatcgttcaccaattactcgcaatacaagttactgag
gaagcagcaatcaatatgatactgaaaaaaacattcagcaaagtgaccatcgaaaaggaa
agtgatttagaagcaaagttaaatttaagtaataacacataa
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