KEGG   Vanessa cardui (painted lady): 124531913
Entry
124531913         CDS       T09161                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124531913
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcd03041]
    124531913
   04121 Ubiquitin system [BR:vcd04121]
    124531913
Spliceosome [BR:vcd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    124531913
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    124531913
Ubiquitin system [BR:vcd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124531913
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 124531913
NCBI-ProteinID: XP_046962437
LinkDB
Position
8:3244188..3255320
AA seq 750 aa
MGSKKHKKESKKRKHRSRSRSPLDGEERERKRHKKHRDRKKDRSPDVEEVPVDSHLPPDN
GVSSGSRSSSLSVRDPRDSKPREEAYRSEMHIYNNNSQESERAASPSPASSAAHDSLSVE
ETNKLRAKLGLKPLEVAEKQADDGKIKDDLGEFYHKPAANISQQRAADKLRERLELRREK
RQLENKLQTTLLADGSDDEDASDWIKKSRELEKQKKEAAKRAAMLDELDEEFGVGALLAD
DRRETRERAYAPTQLRGLRVAHDFAALPDERETVLTLADKEVLAEDSEDVLVNVNIVDDE
KYKKNIEERKKARAGYRAYDEEAELASALGLERSVLSKYDEEIDAEAKLRSRGFRLGDQA
ALEAERAREAMRAERLAGGPDKRLESLQLPELRIASDYLDEEEMQIKFKKVKRKGKIRKK
PKQEPIDVDEHEAGTAPLETDDTEVKPEQLWAADEDEVEVDTELQAALARARRLRLAERA
EHKAEVDEILQQPKEEPPEVDTSDASAMVLDATAEFCRTLGDIPTYGLAGNRDHLAEIMD
FERDEVEAEPEVDTNSGAWSRVDVDSEKPADIAAGAAGGLEAEPALGAGVAGALRLALSK
GYLERAGAAPAPRPRTAAALTAHHYSIEDKTYGEDDKHGRRERGGHSGPLSEFREKNNFR
PNIKLEYVDDDGRPLCPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTP
LGTLQMLQQKQRETQSPFVVLSGAKRDANN
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgggatcgaaaaaacataagaaagaatcaaaaaagaggaaacatcgcagcagatcacga
tcacctttggatggcgaagaacgtgaaaggaaaagacataagaaacacagagatcgcaag
aaagatcgatcacctgacgttgaggaagttcctgtggactcgcacctgccgcccgacaac
ggcgtcagctcgggaagtcgcagcagcagtctcagcgtgcgcgacccgcgagactccaag
ccacgtgaagaagcctacaggtcagaaatgcatatttataataacaacagtcaggaatcc
gagcgcgccgcgtcgccatcgcccgccagcagcgccgcgcacgacagcctctccgtcgag
gagaccaacaagctgagagccaagctagggctcaagccgctcgaggtcgctgagaaacaa
gcagatgacggcaaaataaaagatgatctgggcgagttctaccacaagccggccgcgaac
atctcgcagcagcgcgccgcggacaagctgcgcgagcggctcgagctgcgacgggagaag
cgccagctcgagaacaagctgcagaccacgctgctggccgacggctccgacgacgaagac
gcctccgactggattaagaagtcgcgggaactcgagaagcagaagaaggaagctgcaaaa
agggcggcgatgctggatgagttggatgaggagttcggcgtgggcgcgctgctcgccgac
gaccggcgcgagacccgcgagcgcgcctacgcgcccacgcagctgcgcggcttgcgcgtc
gcgcacgacttcgccgccctaccggacgaacgcgagaccgttctgacgctagccgacaag
gaagtgctcgccgaggacagcgaggacgtgctcgtcaacgtgaacatcgtagacgacgag
aaatataaaaagaacatcgaggagcgcaagaaggcgcgtgcgggctaccgcgcctacgac
gaggaggccgagctggcctcggcgctgggcctggagcgctccgtgctgtccaagtacgac
gaagagatcgacgcggaagccaagctgcggagccgcgggttccgcctcggggaccaggcc
gcgctggaggccgagcgcgccagggaggccatgagggcagagcgtttagccggaggacct
gacaagcgcttggaatcattacaacttccggaactgcgcatagcttccgactatttggac
gaggaggaaatgcagataaagttcaaaaaagtcaagagaaagggtaaaattcgcaaaaaa
ccaaagcaggagccaatagatgtagacgagcacgaagccggaacagcgccgctggaaact
gacgatacagaggtgaagccggagcagctgtgggccgccgacgaggacgaggtagaggtc
gacacggagctgcaggccgcgctcgcccgcgcgcgccgactgcgcctcgccgagcgcgcc
gaacacaaggccgaggtggacgagatattacagcaaccgaaggaggagcccccggaggtg
gacacgtcagacgcgtccgccatggtgctcgatgccactgcggagttctgccgaacgctg
ggagacatacccacttacgggttggccggcaacagagaccatctcgcggagatcatggac
ttcgagcgcgacgaggtagaagcggagccggaggtcgacacgaactcgggcgcatggagt
cgcgtcgacgtcgacagcgagaagccggcggacatcgcggccggtgcggcgggcgggctg
gaggccgagccggcgctgggcgcgggcgtggcgggcgcgctgcggctggcgctcagcaag
ggctacctggagcgcgcgggcgccgcccccgccccgcgcccgcgcacggccgccgcgctc
accgcgcaccactactccatcgaggacaagacctacggcgaggacgacaagcacggtcgc
cgcgagcgcggtggacactcgggcccgctaagcgagtttcgtgagaagaataacttccgg
ccgaacatcaagctggagtacgtcgacgacgacgggcggccgctgtgtccgaaggaggcc
ttccgctacctctcgcacaagttccacgggaaggggcccggcaagaacaaacaagagaag
cgcatcaagaaggccgtgcaggaggggttaatgaagaagatgagctcgacggatactccg
ctgggtacgctgcagatgttgcagcagaaacagcgagagacacagtcgccattcgtcgtg
ctcagcggcgccaaacgagatgccaacaactga

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