KEGG   Vanessa cardui (painted lady): 124532019
Entry
124532019         CDS       T09161                                 
Name
(RefSeq) DNA polymerase beta-like
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
vcd  Vanessa cardui (painted lady)
Pathway
vcd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    124532019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcd03400]
    124532019
Enzymes [BR:vcd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124532019
DNA repair and recombination proteins [BR:vcd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     124532019
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     124532019
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb HHH_8 DNA_pol_lambd_f HHH_5 Cdd1 NTP_transf_2 MG3 HHH
Other DBs
NCBI-GeneID: 124532019
NCBI-ProteinID: XP_046962599
LinkDB
Position
8:4854387..4857520
AA seq 333 aa
MSKRKNPSDNGNLNGDFCEFLMELADYEKNVSRNIHKFNAYKKAASVLASHSKRIQSGDE
ARKLNGIGEKISKKIDEFLNTGKLKKLDDIHKDENAQIISLLTRVSGIGPVKAADLLNMG
IKSIEDLRNNQDKLNHHQLIGLKYFEDFEKMIPRSEIQELENVITKEIKNLDPEFTITIC
GSYRRGKSESGDIDALITHPSLKIGDNKNKCNEKLLKKIIMALDGCITDVISMGETKFMG
VCCLSDKHPFRRLDIRLIPKDQYYCAVLYFTGSDVFNKNMRAHALEKSFTLNEYSLRPIG
VTGVPGEPVQIESEEDIFDYIDYPYQKPEERNM
NT seq 1002 nt   +upstreamnt  +downstreamnt
atgagcaagcgtaaaaatccatctgataatggtaatctcaacggagatttttgcgaattc
ttaatggaattggctgattacgagaagaatgtaagtcgtaatattcataaattcaacgct
tacaaaaaagcagctagtgttttagcatcacatagtaaaagaatccaatcgggagatgaa
gctaggaaattaaatggcataggagaaaagatttccaaaaaaatagatgaatttttaaac
actggaaaactgaaaaaattggatgatatacataaagatgaaaacgctcagattattagt
ttgttgacacgagtatcgggtattggacctgtaaaagctgctgatcttctaaatatgggt
attaaatcaatagaggatttacgaaacaatcaagataaactgaaccatcatcaactaatt
ggcttaaaatactttgaagactttgaaaagatgatcccgaggtcagagattcaagaacta
gaaaatgttattacaaaggaaattaaaaatttggatcctgaatttactattacaatttgt
ggcagttacagacggggaaaatctgaaagtggtgatattgatgccctgattactcacccc
tcacttaaaataggagacaataaaaataaatgcaatgaaaaattattgaagaaaataata
atggctttagacggttgcattacagatgtaatatcaatgggtgaaacaaaatttatggga
gtgtgttgtttatccgacaaacatccatttcgtcgtttagacattcgtctcattccgaaa
gaccagtactattgtgctgttctatactttacagggagtgatgtatttaacaaaaatatg
cgggcgcatgctcttgagaaatctttcactctaaatgaatattcacttaggcccattgga
gtcactggagttccaggcgaaccagtgcaaatagaatcagaagaagacatttttgactac
attgactacccttaccagaagccagaagaaagaaacatgtaa

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