Vanessa cardui (painted lady): 124532199
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Entry
124532199 CDS
T09161
Name
(RefSeq) glutamate-gated chloride channel isoform X1
KO
K05195
glycine receptor alpha-3
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04080
Neuroactive ligand-receptor interaction
vcd04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124532199
04082 Neuroactive ligand signaling
124532199
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vcd04040
]
124532199
Ion channels [BR:
vcd04040
]
Ligand-gated channels
Glycine
124532199
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
124532199
NCBI-ProteinID:
XP_046962889
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Position
9:complement(5831448..5898526)
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AA seq
523 aa
AA seq
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MGWSCVVARAVAFLLMLSRASALTSDIFAAGKSDKEILDNLLKNSRYDKRLLPPVDGVLT
VNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNQSHYDFLNAIHHHEDIWLPDT
YFIMHGDFKDPIIPMHFALRIYRNGTINYLMRRHLILSCQGRLNIFPFDDPLCSFALESI
SYEQSAITYVWKNDEDTLRKSPSLTTLNAYLIQNQTIPCPIKASWRGNYSCLKVDLIFTR
DRAFYFTTVFIPGIILVTSSFITFWLEWNAVPARSMIGNYSCLKVDLIFTRDRSFYFTTV
FIPGIILVTSSFITFWLEWNAVPARVMIGVTTMLNFFTTSNGFRSTLPVVSNLTAMNVWD
GVCMCFIYASLLEFVCVNYVGRKRPLHNVVYRPGENPVTQRLPAVLSRIGIILASPLEAM
AFLNWAKSETPQPESSGAGDKKRESTGAADLVTCTACTGAPGSCTHTTNNGGVSEPCFVQ
VRKKEPPHPIRVAKTIDVIARITFPTAYAVFLIFFFIHYKAFS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggttggtcatgcgtggtggcacgcgccgtggcttttctcctcatgctcagcagagca
tccgcgctaacgtccgacatctttgcagcgggcaagtcggacaaagagattctggacaat
ctactaaaaaactcccgctatgacaaaagactgcttccaccagtagatggtgtcctcacc
gtaaatgttagcgtgctacttcttagtttagcatctccagatgaatctagtcttaaatac
gaggtggaatttcttctgcagcagcagtggtatgatcctcgattgcgatattctaatcag
tcgcattacgacttcctaaatgccatccatcatcacgaggacatctggttacctgacacg
tacttcataatgcatggggattttaaagatccaataatacctatgcattttgcgttgcgc
atataccggaatggcacaatcaactacttaatgcggcgtcatctcatactgtcctgccag
gggcggctcaacatcttcccttttgacgaccctttgtgttcatttgcattagagagtata
tcttacgagcaatcggctattacctatgtgtggaagaatgacgaagatacgctgagaaag
tcgccgtcattgacgaccctgaatgcgtacctcatccagaatcaaaccattccttgtccc
atcaaagctagctggagaggtaactacagctgtctaaaggtggaccttatttttacgaga
gaccgagcattctactttaccacagtatttatccctggaattattctggtgacctcttcc
ttcatcacattttggctggaatggaacgcggttccggcccgttccatgataggtaattac
agctgcctgaaagtggatctcatcttcacgcgagatagatcattttacttcactaccgtt
ttcattccggggatcattttggtgacttcgtcttttattactttttggctggaatggaat
gcagtgcctgctagagttatgataggggtgacgaccatgttgaatttcttcacaacgtcg
aacggtttccggtcaaccctacctgtggtttcaaacttaacagctatgaacgtttgggac
ggggtatgcatgtgtttcatctacgcatcgctacttgagttcgtgtgtgtgaactacgtc
ggtcgaaaacgacctcttcataatgtcgtgtacagacccggcgaaaatccagtgacgcag
cgactgcccgcagttctcagcagaattggcattatactggccagccctttggaggcgatg
gcattcctcaattgggctaaatcagaaacgccccaaccggagtctagcggtgctggagat
aaaaagcgagagtcgacaggagcggctgacttggtgacatgcacggcctgcacgggggct
cctgggtcgtgcacccatacaaccaataatggcggtgtatcagagccatgtttcgtccag
gtccgtaaaaaggagccgccgcacccgatccgcgtggcgaagacgatcgatgtcatcgcc
cgcatcactttccccactgcctatgctgtgtttcttatcttcttcttcatacactacaag
gccttctcttaa
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