Vanessa cardui (painted lady): 124532407
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Entry
124532407 CDS
T09161
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcd03009
]
124532407
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124532407
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
Pre-60S particles
Helicases
124532407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
124532407
NCBI-ProteinID:
XP_046963265
LinkDB
All DBs
Position
9:complement(9680115..9691170)
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AA seq
754 aa
AA seq
DB search
MIQTPKLGDDLPGFEVPDNEDSEKSSVSNKKQKKNSGGFQSMGLNFLVLKGIAKRGYKQP
TPIQRKTIPIALDNKDVVAMARTGSGKTACFVLPILEKLMAPVHKSPQGKNLRALVLSPT
RELALQTLRFMRELGKFTGLTSAAILGGESIEQQFGVMSGSAPDIVVATPGRFLHICIEM
NLKLDNIKIVVFDEADRLFELGFGEQLQEIVARLPTNRQTLLFSATLPKMLVEFARAGLN
DPVLIRLDVDWKLPSTLWLGWIYVRSELKTAALLMLLDRVITPTTPQAVVFAATKHHVEY
LYLILQKAGFTATYAYSGLDASARKIALGKFMNKKCSVLLVTDVAARGLDLPSLDTVINY
NFPAKPKLFVHRVGRSARAGRAGRALSLVSAEDVAHLLDLHLFLGTQLISPDEVTECGDE
CPSGVWGSLPISALELRHQDVMTWEKNISEIEEASRVCGRGWQQYVRWREAASAEANRRA
KATPPPARPHPFLRDAHERAGADLAELIRNYTPKGTILELTGKQDSPMYLAMKAKRRVHG
KTIQKTRENKNQQGDGILEENVNTNINNANDVPKAARVKKNKKIVQRDENYIPHFASDQH
TEAGMAVNFASSASSAELELRGDSEVGLRQRRAQLRWDRKRKRMVHVDPDGGRKMIRTES
GGRVPASFRSGRYDAWRARNAGDDHDDEHDAQRPKTVSEFRPRWVKHNERVAKKKSEASS
KEFRNKQQIVKERLRKDKIKQKLKHKKGLKKKKK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgattcaaactccaaaacttggggatgacctcccaggatttgaagtgcccgataatgaa
gactctgaaaaaagctcagtgtctaacaaaaagcagaaaaagaattctggaggttttcag
tccatgggtctgaattttttagttctcaaaggtatagctaaaagaggatataaacaaccg
acacctatccagcgaaagactattcctatagcactggataacaaagatgtagtggctatg
gcccgcactggatctggtaaaactgcctgttttgtcttacctattctcgagaaacttatg
gcccccgtacataaatcgcctcagggaaaaaatttaagagctcttgttctgtctcctaca
agagaattagctttgcagacattaagattcatgagggaactaggcaagttcaccggcctt
acttcagcagctattcttggtggtgaatctatagaacaacaatttggagtaatgtcgggt
tctgctcctgacattgttgttgccacaccgggtcgttttctacatatatgtatagaaatg
aacctcaaattggataacataaaaattgttgtatttgatgaggctgacagattatttgag
cttggatttggagaacaattacaagaaatagttgcacgtctgccaaccaatcgacaaact
cttctattttctgcgacactgcctaaaatgttggttgaatttgctcgtgctggtctcaat
gatccggtcctaatccgattagacgttgattggaagttaccttcaacattatggcttggc
tggatatatgttagatccgaattaaaaacagctgccttgttaatgttattagatagagta
ataactcctacaactccacaagctgtagtttttgcagcaactaaacatcatgtcgaatac
ttgtatttgatacttcaaaaagctggcttcacggcaacttacgcttattctggtctggat
gcttcagcccgaaagattgctcttggaaaatttatgaacaaaaaatgctctgttcttttg
gttactgatgttgctgcaagaggattggacttgccatcattagacacagtcatcaattac
aactttccagcaaaacctaagctttttgtccatagagttgggcgcagtgcccgcgcgggt
cgtgcgggtcgtgcgttgtcgctggtgtcagccgaagacgtggcgcatttactcgatctg
catctcttccttggcacgcaactcatttccccagatgaggtaacagaatgtggagacgag
tgccctagcggcgtgtggggaagcttacccatcagcgcgctggaactgaggcaccaggat
gtcatgacctgggagaaaaacatctcggagatcgaggaggcgagtcgcgtgtgcgggcgc
ggctggcagcagtacgtgcgctggcgcgaggcggcctcggcggaggccaaccgccgcgcc
aaggccacgccgccgcccgcgcgcccgcaccccttcctgcgcgacgcccacgagcgcgcc
ggcgccgacctcgccgagctgatacggaactacacgccgaaaggaacgattcttgagctg
acgggaaaacaggattcaccgatgtaccttgctatgaaagcaaagcgacgcgtgcacgga
aaaactattcagaaaacaagagaaaataaaaatcaacagggagatggaatattagaagag
aacgttaacacaaatatcaacaacgccaacgatgttcccaaagcggcacgtgtaaagaaa
aataaaaagatcgtacaacgcgacgaaaactacatacctcattttgctagcgatcaacac
acagaagccggaatggcggtgaacttcgcgtcgagcgcgtcgtcggcggagttggagttg
cgcggggacagcgaggtcggcctgcgacagcggcgcgcgcagctgcgctgggaccgcaag
cgcaagcgcatggtgcacgttgaccccgacggcgggcgtaagatgattcgtacggagagc
ggcgggcgcgtgccggcgtcgttccgcagcggccgctacgacgcgtggcgcgcgcgcaac
gccggcgacgaccacgacgacgagcacgacgcccagcgcccgaaaacagtatctgaattc
cgaccgcgatgggttaaacacaacgagcgtgtggctaagaagaaatcggaggcatcttcg
aaagaattccgcaataaacagcagattgtgaaggagcgcttgcgtaaagataaaattaag
cagaagcttaaacataagaaaggtcttaaaaagaaaaagaaataa
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