Vanessa cardui (painted lady): 124532460
Help
Entry
124532460 CDS
T09161
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
vcd04121
]
124532460
Ubiquitin system [BR:
vcd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124532460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
124532460
NCBI-ProteinID:
XP_046963320
LinkDB
All DBs
Position
9:complement(8407476..8431005)
Genome browser
AA seq
1681 aa
AA seq
DB search
FAEFLQRICSSNFVLNSSKVAGASNNNGKGGRSAAPVDVGSPLLDWEEGDHFSFEDSERF
EEDSLCSWTSEPESLCNNWRGWRRPNLQNTFGIRTTKKTIQEKTVSSLSELAAKCVACHI
PFELVENVYPPVPEQLQLQIAFWSFPDSEDDIRLYSCLANGSADEFQKGEHLFRDRAVKD
VLQIGFHLSATVTLSMTRAQYNVAVTFDRQKISSCNCTCSSSAHWCSHIVAVCLYRIHLP
TQVCLRAPVSESLQRLRRDQLQKFAQYLISELPRQVLPTAQRILDELLSAQPNQINTTCG
APDPTAGASAYEFTSWFLDEKTLHNNINKILVKFCVPAPIVFSDVNYLSTSAPPAAAEWS
SLLRPLRGREPEGMWNLLSIVREMFKRSDRNAIPLLEIITEEVMACEQIIVWWYSTKAAL
VAWGGGGKHGAAGNSAAQHACSSLCDEVVVLWRLAALNPGLAPHERDTLHEQFAQWHTKV
LEKVAKNRNNHINTSSSHPRHSRAHSHPPYINGISENEVFPGFHPAMEACFLEWDDYQIP
GVTYTKDLNPLYHSPFTIFRHTDKNDSVHQVNSSKAVLNNEMSLSYRLTNPDPSLIGHRK
LLHRNNRVTVDMAIPGPSSQARGSGEGPSDVLVRDSGPSDGNHSSVSSEGFCENEEEILQ
QSGGDTDSQESSSAGASSDDAVRRVSHDDSVSDDDCNLYYYDATAARRVAIDSANSNQTH
NSSGSRNGGGSSSFANWGCGWEVSFARAEGLHAHGHAREACALGACLAAELLASPPALVS
RSVGSGAGASVGASVGSVLSAAAEARRARRRHAPSPRLCAASHRLSCLASATLAKCAFLC
TVLAEFNEHHELAFRVGLYALEMARPPASTKALEVKLNNQETELVALLKKLPTGVEQLLL
AREKAEQLRDGTLRNRGPALLPIALASFLFDVLVLSATDKENKHPARLPSDEMLGFESAV
AALGLKANVSEADHPLLCEGTRRQRGELAITLLSFYKDDPVKLARIMNKLLDREIHQLTK
NPMVSMYYTNNPRLAAYRTDTALYNHQVHSVHAQHSAPVLQQSASACPLVGDMERLSVSE
GGPSPPAAPHASHQTHAPPHQTLPRLKDSRYKGKRLYPSVPNQPSEASAHFMFELAKSVL
FKAGGSSSTSLFTETSCAREHHGPHRGLHMAAFQLGLYALGLHNCVSANWLSRTYSSHVS
WITGQAMDIGAPAILFLIDAWEGHLTPPEAAGIADKASSGCDVHLVRAAAELALSVLPHA
HALNYNEIQRAVLQCKEQGDAMLERACLTVEAAAKGGGVYPEVLYTVARYWHELYMRQAS
EEGDCVLDEPAYRAPPPLAVPLPYPLPYPFAYHPYPPPIYQLQVTHPPQFGGTATAHPGA
QFALQPYFVRGIVAQTHAHPQHAAHPQHVPHAQHSAHPPSITVNENVVYQQHPAPIPVSM
PAGHVQMPTPGVSTVGGVGAGVNAVGTVTTVSGVSAVSGVSGTIGTANGVGPPALPPAQL
RRLLAAYRVGMLALETQARRVHDDRPQNKFGRNPPYGEHVKWLLRISKRLGAQYLHQFCV
CAVNSVVSPFVLYELCVESAHWLARGGPHHLVMQHLRGTLAPLVHKCQQMYIQCIHQKLY
HLTAVEYEEFVGIVLSARTAFQLTPEGNTQFKEWLSTLRRSKSCKKDLWTQLNVALQTNG
K
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
ttcgctgaatttctacagcgaatctgttcttctaattttgtactaaacagcagtaaagtg
gcgggggcttcaaataataatgggaaagggggacgatcagccgccccagtcgacgtggga
tctcctttactcgactgggaggaaggagatcatttcagttttgaagattcagaacgtttt
gaagaagattcattgtgcagctggacctcagaacctgagagtctttgcaacaattggcga
ggatggagaagaccaaatcttcaaaacactttcggtattcgcaccacaaaaaaaacaatt
caagaaaaaactgtatcaagcctaagtgaactagcagcaaagtgtgtcgcttgtcatatt
ccctttgaattggttgaaaatgtttatccacctgtgcctgaacaacttcagttacaaatt
gccttctggagttttcctgatagcgaggatgatattcgtctttattcttgtcttgcaaat
ggatcagctgatgagtttcagaaaggtgaacatttgttcagggacagagctgtaaaagat
gttttacagattggcttccatttatctgcaactgttacactaagtatgacaagagctcaa
tacaatgtagcagtcacatttgacagacaaaagatttcttcctgcaattgcacctgctct
tcgtcagcccactggtgttctcatattgttgctgtatgcctttacagaatacatttacca
acacaagtctgcttaagagcaccagtgtctgaatcactacagagattacgaagagatcag
ctacagaaatttgcacaataccttatatcagagttaccacgtcaagttttgcccacggca
cagagaatattagatgaattattgtcagctcaaccgaatcagataaacacaacttgtgga
gcgccagatcctaccgctggcgcatcagcttatgagttcacttcttggtttctggatgaa
aaaacattgcataataacattaacaaaatattagtgaagttctgtgttccagctccaata
gtatttagtgatgtgaactacctgagtactagcgcccctccagctgctgccgaatggtcg
tcactactgcgaccactcagagggagagaacccgagggaatgtggaatttgttgtctatt
gtacgagaaatgtttaaacgaagtgatcgaaatgcaattcctttgcttgaaattatcacc
gaggaagtgatggcttgcgaacagattatagtgtggtggtacagtaccaaggcagctctg
gtggcgtggggcggcggcgggaagcacggcgccgcggggaactcggccgcgcagcacgcc
tgctcctcgctctgcgacgaggtggttgtactctggcgtttggctgctctgaacccgggc
ctggcgccacacgaacgagacacactgcacgaacagtttgcccagtggcatacgaaagtc
ctagagaaggtggctaagaatcgcaacaaccacatcaacacgtcgtcgtcgcacccgcgc
cattcgcgcgcgcactcgcacccgccctacatcaacggcatcagtgagaacgaagtgttt
cccggtttccatcccgcgatggaagcctgcttcctcgagtgggacgactatcagatcccc
ggcgtcacttatactaaggatctcaatccgctctaccacagtccattcaccattttccga
cacacggataagaacgacagcgtgcaccaggtcaactcttccaaggcagtgttgaataat
gagatgtctctgagttatcgtctcacaaatccggatccctcacttattggtcatcgcaag
ttactccatagaaacaatcgtgtaacagtcgatatggccatccccggaccttccagtcag
gctcgtggttcgggtgaagggccgagcgatgtattagtacgtgattcgggcccaagtgac
ggaaatcattccagcgtctcatctgaaggcttttgcgagaacgaagaggaaatactgcaa
cagagcggtggcgatacggactcgcaggagtcgagctcggccggcgcgtcgtcggacgac
gccgtgcggcgcgtgtcgcacgacgactccgtgtccgacgacgactgcaacctctactac
tacgacgccacagccgccagacgagtcgccatcgacagcgccaactccaatcaaactcac
aattcaagcggtagtcgtaacggcggaggttcgagctcgttcgccaactggggctgcggc
tgggaggtgtcgtttgcgcgcgctgagggcttgcacgcacacggacacgcaagggaggcc
tgcgcgctcggtgcctgtctggctgccgaactactcgcgagcccgcccgctctcgtgtct
cgctcggtgggctcgggcgcgggtgccagcgtgggcgccagcgtgggctcggtactgagc
gcggcggcggaggcgcgacgcgcgcggcgccgacacgcgccgtcgccgcgcctgtgcgcc
gccagccaccgcctgtcgtgtctcgcgtccgccacgctcgccaagtgcgctttcctttgc
acggtgttagcagagtttaatgaacatcatgaattggcattccgagttggtctatacgcc
ctggaaatggctcgtccgcctgctagtacgaaagcactagaagtaaagcttaataatcag
gagacagaactggtggcgttgttgaaaaaactccccactggagtagaacagctactgtta
gctagagaaaaagcggaacagttaagagatggaactctcagaaatcgtggcccagcccta
ctccccatagcgttggcgagcttccttttcgacgtcctcgttctatcggctaccgataaa
gagaataaacacccagcaagattaccatcggacgagatgttaggtttcgaatctgctgta
gcggctttaggcctaaaagcgaatgtgtcggaagctgaccatccattgctttgcgaggga
acacgaagacaacgaggcgaactggctattactcttttatcattttataaggacgatcct
gttaaactagctaggatcatgaacaagctactggaccgtgaaatccatcaactaacgaag
aatccaatggttagcatgtattacacaaacaacccgcgcctagccgcctaccgcactgac
acagcactgtacaaccatcaagttcattctgtgcacgcgcagcattctgcacctgtcttg
caacaatcagcgtcggcgtgcccgctggtgggcgacatggagcggctgtcggtgtcggag
ggcggcccgtcgccgccggccgcgccgcacgcgtcgcaccagacgcacgcgccgccgcac
cagacgctgccccggctcaaggactcgagatataagggtaaacgactgtatccatcggta
cccaatcagccttcagaagcttcagcacatttcatgttcgaattggctaaatctgtacta
ttcaaagctggtggctcctccagtacaagccttttcacagaaacatcttgtgctagagaa
catcatggtccacatagaggattacatatggcggcattccagttgggtttatacgcctta
gggctacacaattgtgtaagcgcaaattggctaagtcgtacttattcttcacacgtaagc
tggattacagggcaagctatggatattggagcaccggcaattttgttcctcatagatgcc
tgggagggtcatctcactccaccagaagctgcgggaatagcagataaagcgtcgtcgggc
tgcgacgtgcacttagtgcgcgcagcggcagagctggcgctgtcggtgctgccgcacgcg
catgcgctcaactacaacgagatccagcgcgccgtgctgcagtgcaaggaacagggcgac
gccatgctcgagcgcgcctgtctcaccgtcgaggcggccgccaagggaggtggtgtgtac
ccggaagtactatacacagtggcgcgctactggcacgagctgtacatgcgccaggccagc
gaggagggagactgcgtactcgacgagccggcctatcgtgcgccacctcccctggccgtc
cctctgccttacccgctgccctaccctttcgcctaccacccttatcctcccccgatctac
cagctgcaagtaactcaccctccacagttcggaggcacagcaacagcgcacccgggtgca
cagttcgccctgcagccatacttcgtgcgcggcatcgtggcccagacgcacgcgcacccg
cagcacgcagcgcacccgcagcacgtgccgcacgcgcaacactcggcgcacccgccgtcc
atcacggttaacgaaaacgtagtttatcagcagcatcccgcacccattccggtttcgatg
ccagccggacacgtccaaatgcccacacctggggtcagtaccgtcggtggcgtgggcgct
ggagtgaacgctgtgggcacagtgacaaccgtcagtggagtgagtgctgtgagcggagtc
agcggaactattggtacagccaatggcgtagggccaccggccctgccgccagcgcagctg
cgtcgcttgttagccgcttatcgagttggaatgttagcgctggagactcaggcccgtcga
gttcacgatgaccgcccacaaaataaatttggaagaaacccgccgtacggcgagcacgtg
aagtggctgctgcgcatatcgaagcgcctgggcgcgcagtacctgcaccagttctgcgtg
tgcgcagtcaactcggtggtgtcgcccttcgtgctgtacgagctgtgcgtggagtccgcg
cactggctggcgcgcggcggcccgcaccacctcgtcatgcagcacctgcgcggcacgctg
gcgccgctcgtgcacaagtgccagcagatgtacatacaatgcatacaccagaagctgtac
catctgacggcggtggagtatgaggagttcgtcggcatcgtgctgtcggcgcgcacggcc
ttccagctgacgcccgagggcaacacgcagttcaaggagtggctctccactctgcgccga
tccaagtcgtgcaagaaggacctgtggacgcagctgaatgtggcgcttcagacgaacggc
aaatga
DBGET
integrated database retrieval system
