Vanessa cardui (painted lady): 124532535
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Entry
124532535 CDS
T09161
Name
(RefSeq) NPC intracellular cholesterol transporter 1-like
KO
K24682
patched domain-containing protein
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vcd04990
]
124532535
Domain-containing proteins not elsewhere classified [BR:
vcd04990
]
Other domain-containing proteins
Patched domain-containing proteins
124532535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sterol-sensing
Patched
NPC1_MLD
ACR_tran
Motif
Other DBs
NCBI-GeneID:
124532535
NCBI-ProteinID:
XP_046963436
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All DBs
Position
9:complement(11032826..11036883)
Genome browser
AA seq
945 aa
AA seq
DB search
MPSIKKIKSPQQIWENISSVFVEFVERIFYTLGVFVAKHPWRTIVATWAFVLLSCGGLLT
FHIEKNPMKLWVPPDSDFFYDTNWYINNFGTNFRLQKLLITADNVLDSNVIQLIYNISSH
VSSLKVEHQNKVYTLNDLCFKVPVVNFASTNWKSRSDESMQVNNSKPLQKRGAVDEDLSD
PSLWIDEDFYCSFLESFPLVCLQYNIIDMFKRNATLINNATNDDIITNINNIRINPSTGH
PVDFTQLLGGIELDEAGKVVSAKSILLTWYMYVNMTQVDLNEVGNLVGTEDWVSIPLALW
ELEYLKYVKSLSFDDNNIKFYYEAGRSFADTSGETMFQDMDKLFIGIVLMFFYVVMAVSR
FNWLEIRLTLGSIGLLNVGMAYITTIGWCSLMGIPFGPVHSSLPFLLMGLGVDDMFVMNA
CWKIVLAEDSQKNIHIKVGHMLKHAGVSIVITSFTDIVALLIGAITILPSLKSFCIYAAV
GVFFIFCFSVTFYVAVFTLDIRRVEQKRNGILLCYKHKTEISLPTEKTIFQRFLESIYRN
IVLTTPGKTIILLFTLGMTCFSVVSILKLEQRFDPKWFIPDGTYYKDFLNVHEYYYPDEG
QPATVFLGDMDYSVEFVKLYDMIQVLRNESYVTEVNTWVETFHGYVHKNYDLDLKNSTAV
SSTQFNKYLSRFLFSPVGGRFQINFKFKDPLTCGHVFNNITASSLAFRFTRFEGPEEYVP
AMNRVKEIVKSTNITTGSGYRSVWSKVFANWVTDEIIGVEVERNIELALFCVMICTVILI
TNLQMCLWIFVCVMLTIVNVLGWMQRWGMTVDIVCCIGLELAIGLCVDYAAHVGHTFLTI
SQGSRNERAFKTVTSIGTAVLLGGGSTLLSLSLLSMSKAYTFQSFFKIFLLVILFGLSNG
LLFLPVVLSLIGPAAYRPHDKKDGSPEGVELNGKFSEKEKQIDED
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgcctagtataaagaaaatcaagtcacctcaacaaatatgggaaaatatttcttctgtt
tttgtggaatttgttgagcggatattttacaccctcggagtatttgttgccaaacatcca
tggagaactatagtggcaacatgggcctttgtcctcctgagctgcggtggattactcaca
tttcacatagaaaagaatcctatgaaactatgggtgcctccagattcagatttcttttat
gacaccaattggtacatcaacaattttggtacaaattttagattacagaaattattaata
acagcagacaatgtcttagattcaaatgtgatacaattaatttacaatatctcaagtcat
gtgagctcactgaaagtcgaacatcaaaacaaagtgtatactctgaatgatttatgtttt
aaagttcctgtcgtcaattttgcaagtacaaattggaaatctagatctgatgaatcaatg
caagtaaataatagtaagccgttacagaagcgtggtgctgtcgatgaagacttgtctgat
ccatctctttggattgatgaggatttttattgtagttttctcgaaagcttcccattagtg
tgccttcaatataatataatagatatgtttaaaaggaatgcaactcttataaataatgct
acaaacgatgatataataacaaatataaataatattagaataaatccatccaccggccat
cctgtagactttacacagctgctgggtggtatagagcttgatgaggcgggtaaagtagta
tcagccaaatccattttgttaacttggtatatgtatgtaaacatgacacaagtggatctc
aatgaggtaggtaatttagtcggcactgaagactgggtatcgattccattagcactttgg
gaattggaatatttgaagtatgtaaaatccttatcttttgatgataataatattaaattt
tattatgaagcgggtagaagctttgcggatacaagtggagaaacaatgttccaagatatg
gataaattatttataggtattgtgttgatgtttttttatgttgtgatggctgtctctcgt
ttcaactggttagagattagattaacgttaggtagtattggtctcctaaatgttggaatg
gcttacattactactataggttggtgctctttgatgggtatcccttttggtcctgttcat
tcttctttacctttcctactaatgggtcttggtgtggatgatatgttcgttatgaatgct
tgctggaaaatagtcctagctgaagattcacagaaaaatattcacatcaaggttggtcac
atgctaaaacatgcaggagtatccattgtaataacatcattcactgatattgttgcctta
ttgattggtgctatcacaattttaccatcattaaagtctttttgtatttatgctgctgtt
ggggtgttctttatcttttgtttttctgttacgttttatgtagcagtgttcaccttagat
attaggcgagttgaacaaaaacgaaatggtatattgctttgctataaacataaaactgaa
attagtttaccaacagagaagacaatatttcaaagattcctagagagtatctatagaaat
atagtattaactactccaggaaaaactattatattattatttactttaggtatgacttgc
tttagtgtagtatcaatattgaaattagaacagagattcgacccgaagtggtttattcct
gatggtacatattacaaagactttttaaatgttcatgaatactactatcctgatgaaggg
caaccagcaacagttttcttaggtgatatggattatagtgtagaattcgtaaaactatac
gatatgatacaagtattgagaaacgaatcatacgtaacagaagtaaatacgtgggttgaa
acgtttcacggatacgtccataaaaattatgatcttgatttaaaaaattccacagcggta
tccagtacacaatttaacaagtatttatcaagatttctttttagtcctgttggtggaaga
tttcaaattaattttaaattcaaagatccgcttacttgcgggcatgtatttaataatata
acagcttcgtcactggcattcagatttactaggtttgaaggtccagaggaatacgtacct
gcaatgaatcgagttaaagaaattgttaaatcaaccaatattacaaccggaagtgggtat
cgtagcgtctggtcaaaagtatttgctaattgggttaccgatgaaattattggcgttgaa
gttgaaaggaatatcgaattagctctattttgtgtcatgatttgcacagttattttgatt
acgaatcttcagatgtgtttgtggattttcgtttgtgttatgttaacaatagttaatgtt
ttggggtggatgcaacggtggggaatgactgttgatattgtttgctgtattggcctcgaa
cttgcaataggtctgtgtgtagattacgccgcacacgttggacatacctttttaacgatt
tcccaaggttctcgtaatgaaagggcctttaaaacagtcacttctatcggcactgcggtc
cttttgggcggaggttcaactttgctatctttatcactattaagtatgtcgaaagcctac
acttttcagtcatttttcaaaatatttttgcttgttatactttttggtctttctaatggt
ttgttattcttgccggtcgttttgtcccttattggcccagcggcctatagacctcatgat
aaaaaagatggatcacccgaaggtgtggaattaaatggaaagtttagtgaaaaggaaaaa
caaatagatgaggattga
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