Vanessa cardui (painted lady): 124532737
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Entry
124532737 CDS
T09161
Name
(RefSeq) protein strawberry notch-like isoform X1
KO
K26273
protein strawberry notch
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcd03036
]
124532737
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124532737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124532737
NCBI-ProteinID:
XP_046963738
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Position
10:complement(10336305..10360407)
Genome browser
AA seq
1353 aa
AA seq
DB search
MSKRKAFGDNSPAASDDDSDFDDDEDPDNLEVPGGGKTLAAAARFGDKTKIPQTSAPVTV
KATTNPLAAPSGLAFGQMSNVKPIKISASSLTKPINLGLGRGVAAPVASFAAGTSAYNAA
SLLAQMEMVGVQGMNSYLLQNLNQILASGMGGPLAGMLGQFAQLPNWGQMKGMWPTDKTQ
MPGEEEEVDDEEMGVAETYADYMPTKLKLGRKHPDPVVETASLSSVEPVDVTYSVSLPDD
TVRNGLLSALQLEAVVYASQAHEHLLPDGTRAGFLVGDGAGVGKGRTIAGIIFENYLRGR
KRAVWVSVSNDLKYDAERDLRDVGAAKIDVHSLNKFKYAKISSAINGNVKKGVVFSTYSA
LIGETQANTKYRTRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQ
NKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVEKRGVGAMEIVAM
DMKLRGMYIARQLSFHGVTFKIEEVPLSDSFREVYDKAVALWVEAMQRFTEAAELIDAEP
RMKKTMWGQFWSAHQRFFKYLCIAAKVNQAVVTAREAVKCGKCVVIGLQSTGEARTLDQL
ERDDGELSDFVSTAKGVFQTLVEKHFPAPDRERINRLLGLEAKGKPAAPVPTFNGKNGID
DANSSKRKLTARQQANAAKRPRAGSSDDEFMRSDDEVEAEAEAEPDSDEERRASDSDLSD
FNPFRAGSDSDDEPWLGRKKKAAKKKKSRVKKKAASTQDKIETMFERKCQPAAPRAAPGA
PPATPAGTPVGTNGLYLGPTRTQAPARSAIERACSMKEQLLLAIERLGRRLPPNTLDQLV
DELGGTDNVAEMTGRKGRVVQTEDGQILYESRSEADVPLETLNLTEKQRFMDGEKDVAII
SEAASSGISLQSDRRARNQRRRVHITLELPWSADRAIQQFGRTHRSNQVNAPEYIFLISD
LAGERRFASTVAKRLESLGALTHGDRRATEMRDLSQFNIDNKYGRTALEAVMKAIMKYET
PLVPPPRDYSGDFFQDVASALVGVGLIVNTENAPGVLSLDKDYNNMSKFLNRILGMPVDL
QNRLFKYFTDTLTAVMEQAKRSGRFDLGILDLGGAGDSVRRVRCVRFLRRHATGQAPVEL
HTVHSERGMEWSEALDKWSQTEALGEATEGDGFYVSAAARGGKLSAVLCLAQRARRERER
ERAKERMFQVYRPNTGLQLKLESLAEIEKKYRRANLTEAETAWRAQHSASLRVCAHAYWR
NACRNADHCEVGLRVRTYHVLAGSVLAVWARVEAALAARSAAKMQVVRIKTDDGLKIVGT
LIPKNCVETLKETLSSDAVSVTEQTFEQPDALK
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgtaaagcatttggtgataactcacccgctgcatcagatgatgattcagat
tttgatgacgatgaagatccagataacttggaagtgccaggcggggggaagacgttggct
gcggcggcacgatttggcgacaaaactaagatcccccagacctcagcgccggtcacggtt
aaagccaccaccaacccgttggcggctccttctggcttagcattcggccagatgtcaaat
gtaaagccgatcaaaatatccgccagttcactcacgaagcccatcaatttgggcttaggc
agaggagtggcggcgccggtggcgtcgttcgcggcgggcacctccgcctacaacgccgcc
tcgctactcgctcagatggagatggtcggcgtgcaaggaatgaactcatatctactgcag
aacctgaatcagatcctggcgtcagggatgggagggccactcgctggaatgctcggccag
tttgcccagctgccaaactggggacagatgaaaggaatgtggccaactgataagacacag
atgccgggagaagaggaggaagtggacgacgaagaaatgggcgtcgccgagacgtacgcg
gactacatgcccacaaaactgaagctgggccggaagcaccccgacccggtggtggagacg
gcgtcgctgtcgtccgtggagccggtggacgtgacgtacagcgtgagcctgcccgacgac
acggtgcgcaacgggctgctgtcggcgctgcagctcgaggccgtggtgtacgcgtcgcag
gcgcacgagcacctgctgcccgacggcacgcgcgccggcttcctcgtgggcgacggcgcc
ggcgtgggcaagggccgcaccatcgccggcatcatcttcgagaactacctcaggggccgc
aagcgcgccgtctgggtgtccgtctccaacgacctcaagtacgacgccgagcgcgacctg
cgcgacgtcggcgccgccaagatcgacgtgcactcgctcaacaagttcaagtacgccaag
atatcgtcggcgataaacggaaacgtgaagaagggtgtggtgttcagtacgtactccgcg
ctcatcggggagacgcaggccaacaccaagtaccgcacgcggctcaagcagctgctgcag
tggtgcggggaggactttgacggagtcatcgtttttgatgaatgtcacaaagcgaagaac
ctttgtcccgtcggttccggcaaagccacgaagaccggtctcacggccttggagctccag
aacaagttaccgaaggcccgcgtggtgtacgcgtcggccacgggcgcctccgaaccccgc
aacatggcctacatggtgcgtctcgggatatggggggaggggaccccgttcccgactttc
atggatttcatcaacgccgttgagaagcggggtgtaggtgcgatggagatagtcgccatg
gacatgaagctgcgaggcatgtacatcgcgaggcagctttccttccacggagtgacattc
aagatagaggaagtaccgctgtccgactcgttcagagaagtttacgacaaagccgtggcg
ttgtgggtcgaggcgatgcagcggtttacggaggctgccgaactgatcgacgctgagccc
cgcatgaagaagactatgtggggccagttctggtccgcgcaccagaggtttttcaagtac
ctctgcatcgctgcgaaggtgaaccaagcggtggtgacggcgcgcgaggcggtgaagtgc
ggcaagtgcgtcgtcatcggcctgcagagcacgggcgaggcgcgcacgctcgaccagctc
gagcgcgacgacggcgagctcagcgactttgtctccaccgccaagggtgtgtttcaaacg
ctagtagaaaagcattttccggccccggacagggagaggatcaaccgtctcttgggactg
gaggccaagggaaaaccagcggcgcccgtgcccacgttcaacggaaagaacggcatcgac
gatgccaattcgtccaagagaaaattgacggcgcgacagcaggccaacgcggcgaagcgc
ccgcgcgccggctcgtccgacgacgagtttatgcgctcggacgacgaggtagaggccgag
gcggaggccgagcccgactccgacgaggagcggcgggcctcggactcggacctcagtgac
ttcaaccccttccgcgccggtagcgacagtgatgacgaaccgtggttgggtcgcaagaag
aaagccgcgaaaaagaaaaaatcacgagtaaagaagaaggcagcgagcacgcaggacaag
atcgagaccatgttcgagcgcaagtgtcagcccgccgcgccgcgcgccgcgcccggagcg
ccgcccgccacgcccgccggaacgcccgtcggcaccaacggactctatctggggccgacg
cgcacgcaggcgccggcgcgctccgccatcgagcgcgcgtgcagcatgaaggagcagctg
ctgctggccatcgagcgcctcggccgccgcctgccgcccaacacgctcgaccagctcgtc
gacgagctcggcggcaccgacaacgtcgctgagatgacaggtcgcaaaggtcgcgtggtt
caaacggaagatggtcaaatcttatacgagagtcggtcagaggcagatgtccctcttgaa
accctgaacctcacggagaagcaaaggtttatggatggtgagaaagatgtggcgatcata
tccgaagcggcgtccagtggtatctcgttgcagagtgatcgaagagcgagaaatcaaagg
cggagagttcacataactttggagctaccttggtccgcagacagagccatacaacagttt
ggtcgtacgcaccggtctaaccaggtgaatgctcccgagtacatattcttgatctcggac
ctggcgggagaaaggcggttcgcatcaacggtggcgaagcgcctcgagtcgctgggagcc
ttgacacacggagaccgtcgcgccactgaaatgcgagatctcagccagttcaacatcgac
aacaaatacggtcgtacggcgctggaggcggtgatgaaagcaataatgaagtacgagacg
ccgctggtaccgccgccccgcgactactccggggacttcttccaagacgtggcgtccgcg
ctcgtcggcgtcggactcatcgttaacacggagaacgcgcccggagtgctctccttggat
aaggattacaacaatatgtccaagttcctaaacagaatactcggcatgcctgtagacctt
caaaatagacttttcaaatactttacggacacactcaccgctgtcatggagcaagcaaag
cgcagcggacgcttcgacctcggcatcctcgacctgggcggcgccggcgacagcgtgcgg
cgcgtgcgctgcgtgcgcttcctgcgccgccacgccacggggcaggcgcccgtcgagctg
cacaccgtgcactccgagcggggcatggagtggtcggaggcgctggacaagtggtcgcag
acggaagcgctgggcgaggcgacggagggcgacggcttctacgtgtcggcggcggcgcgc
ggcggcaagctgtcggccgtgctgtgcctggcgcagcgcgcgcgccgcgagcgcgagcgg
gagcgcgccaaggagcgcatgttccaggtctacaggccgaacacgggactgcagctgaag
ctcgaatcgctggccgagatcgagaagaaatatcgtcgtgcgaacttgacagaggcggag
acggcgtggcgtgcgcagcactctgcctcgctgcgtgtgtgtgcgcatgcgtactggcgc
aacgcgtgcaggaacgcagaccactgcgaggtgggcctgcgtgtgcgcacgtaccacgtg
ctggcgggctcggtgctggcggtgtgggcgcgcgtggaggcggcgctggcggcgcgctcg
gccgccaagatgcaggtcgtgcgcattaagactgacgatggactgaagatcgttggtacg
cttattccaaagaattgcgtagagacgttaaaagaaacgctctcatcggatgcagtttct
gtcaccgagcagactttcgagcaacccgacgcgctgaagtga
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