Vanessa cardui (painted lady): 124532924
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Entry
124532924 CDS
T09161
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124532924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcd03400
]
124532924
Enzymes [BR:
vcd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124532924
DNA repair and recombination proteins [BR:
vcd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124532924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
124532924
NCBI-ProteinID:
XP_046964005
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All DBs
Position
10:complement(13891528..13893859)
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AA seq
329 aa
AA seq
DB search
MTWNKIKCNRRELQLVGTLNGGQSFRWEYNKEIDEWIGVFSKTVWKLRQDDDHLQYKVIG
TLLNKTSKTTKQSCDDEIFKNLLEKYFRLNFKLSDYYKEWSEKDSLFQSACKQFYGIRML
YQEPVENLFSFICSQNNHISRISTMVEKLCKHYGDKICDHEGTTFYAFPEVEKLSNPQIE
SELRDLGFGYRAKFIQKSASQIVEWGGEEWFKSLQEMKYKDARLELMKLCGIGPKVSDCI
CLMSLNHLEALPVDTHVYQIAAQNYLPHLKGKKSVTEKMYSEIGDHFRMLYGDMAGWAHT
VLFCADLKKFQQDENSEPKEEKPRKRKKK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacttggaataaaataaaatgtaatcgaagagaacttcaattagtaggaactttaaac
ggaggtcaaagtttcaggtgggaatataataaagaaatagacgaatggatcggggtgttc
tcgaaaacagtttggaaattgcggcaagatgatgaccatttacagtacaaagttattggt
acattactaaacaaaacatctaaaacgacgaaacaaagttgcgatgatgaaatctttaag
aatttactagaaaaatatttccgattgaattttaaattgagtgattattataaagagtgg
tctgaaaaagatagtttgtttcaatcagcttgtaaacaattttacggcataagaatgctt
tatcaagagccggtggagaatctattttcatttatttgtagtcagaataatcacatctct
aggatatcaactatggttgagaaattgtgtaaacattatggagacaagatatgtgatcat
gaaggtacaacattttatgcatttccagaagttgaaaaattatcaaatccacagattgaa
tctgaattaagagatttaggtttcggttatagagccaaattcattcaaaaatcagcatcg
caaatagttgagtggggaggtgaagaatggtttaagagcttacaagaaatgaaatacaag
gatgctaggcttgaactgatgaaactctgtgggataggaccaaaggtttcagattgtata
tgtttgatgtctctaaaccacttggaagcgctgccagttgatacacatgtgtaccagata
gcagcccagaactacctgccacacttgaaggggaagaagagtgttaccgagaagatgtac
tcggaaataggagatcatttcagaatgttgtacggtgatatggcaggatgggctcacact
gtattattttgtgccgatctaaagaaattccagcaagatgagaattcggaacccaaagaa
gaaaaaccaaggaaaagaaagaagaaatga
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