Vanessa cardui (painted lady): 124532992
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Entry
124532992 CDS
T09161
Name
(RefSeq) cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124532992
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcd02000
]
124532992
Transporters [BR:
vcd02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
124532992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
DUF2946
MMR_HSR1
Imm_superinfect
Motif
Other DBs
NCBI-GeneID:
124532992
NCBI-ProteinID:
XP_046964093
LinkDB
All DBs
Position
10:complement(10567020..10623669)
Genome browser
AA seq
1849 aa
AA seq
DB search
MSDTNGVLGSARDDGRRTPASTEQLTKCEREPDCVAIGSRLRGPMGTRPPAAFWPQLWAT
VVRSLLLKKRDTRKTLAEVLVPLYSLGVLIFLKMLVPNPNFPEVRKPGRLLRIHHDAISD
NHSVAVVADWDTANGTLGFLDDINSLLIESGQHPVNWIRYNNTTDLNDAYHNDAKTFPLA
VIFHTDPGAYGEPLRYTIRTNPSRDGGTPSTRTLTTSPAKCRERTGFKDWSSDWSRGGQL
IPLSEMHREDTCPVLQYYYTGFLALQTLIDYVKIKMDTGTRFFPPRVDLRQFPKRQHTGD
WLVIFRVIMPMYMVMTLSQFITYLLMFVVGEKEKKIREGMRIMGLKDSVYWGSWFLIYAV
FVTILSIVSTVLLFTLKVFQHSSYILIFLLMLLFGFTIITFAFMLTPFFDKARTAGILGS
FAVNLMSGLYFIQVFVSNADSLAFWFVSLISSSCYALAMDKALVLDMAGVGVTWDNLWSG
PGVPFGGSLIMMAVDTVLYGLAAYWLDAVVPSEYGIKQKPWFCLLPSFWVGRRARVAAEH
LHSNGDALHKDIEPVPKELQDKEAIRIVGLQKSFRHCRRPEVKAIDGIDLSIYEGQITAV
LGHNGAGKSTLFNILTGLTAPTAGTAYVYGLDVRDPNDMHEIRQMIGVCPQQDVLFDLLS
VKEHLQFFAAVKGIPRRRISDEVHKALSEVGLLEQASVFSKHLSGGQKRKLSIAIAFIGD
PKIIILDEPTAGVDPVSRRQTWRILQRARRGKVLLLTTHFMDEADILGDRKAVISKGRVR
CAGTSLFLKNKFGIGYHLTLVLDGACREHQITRLVRGHVPRAEKARRHGRELSYILPHYA
VHLFPPLFHAIEHEIRDKTNRLGITSYGVSMTTLEEVFLSLEGENAEETEAVEGVSSVKL
VRARALSRSLSLQSKTLSYQELNDKDQQKTTSLPTPPASHALHSTTHGVEHVKVTPEAPV
AADVLGEMVKTSPSCWRTFCALVYIRTVRMIRDPYKLYVMIFMPIISCALGLYMKSRQIV
FFRMQPLKLEPNAYFNKTPIALYSEQDNFKEIADFKDSLETLGAHPIDLFDGNFSSLLDM
ENFGAFSLKDSLIPFGKIMAYYNSTYTHSLPIIINLLDNSIYRVLMTASGQLESFKPIEV
LTHPFQQTEQQEEFNLGNVVCAIFMGMIFALVPVTLAVDIVYDREIKAKNQLRVNGLSMS
MYFLTYFTILIFIMIVTSAGVLVLVILNDIPSLTNGSAITMLCGLLILYSPSAILFNTCL
SYIFDKMDSAQSIMPNITTWVGVIPFILVAVLDTFKWGSNIAFYLHLVFSFLDVMYIPYA
IIYYVDRVYVTCNLRGLCTVPSLSSYFTAEVWVLIVAMLVHVPVCGAALLAADRLKSGGR
ICTRKGSAAAADSEAEAGGDGGEDDDVRRERRRVAALLAARDHTAPALLVHNLRKEYKLR
GTRNGTACCGGGEALRRAALARLSLAVQGGEVFGLLGHNGAGKTTTMKIITAEERLTCGT
VMLGGQNIEEAQSGAFQMLGYCPQHDALWKNVTIREHIECYAAIRGISKADTPRIVEAYL
QGLQIAEHAGKNAEECSGGTRRKLSFALAMVGSPRVVLLDEPSTGMDPRSKRFLWDTILA
SFQGRKGAILTTHSMEEADALCSRVGIMVKGGLRCIGSTQHLKNLYGAGYTLEMKIGQQN
QKSTMLESDLSLTPSPLRSANNSPSLGEADEGSGAGSATVEAEVEAEGEGEGEGEAVDVS
IHTPLVANTSSARLHHQRTESGGGASSEAAIALVAQLFPAAVLEESFAERLVFSVPQSSV
SSLARCFQQIEEAKEKLNIVEYSFSQTTLEQVFLKFAQSENVESSDQEH
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataccaatggggtgctgggtagtgcgcgggatgatggacgccgtacgccggcc
agcaccgaacagctaacaaaatgcgagagggagccagactgcgtggcgataggtagcaga
ctgcgagggccgatgggcacgcgtccgcccgcggccttttggccgcaactctgggccact
gtcgtcaggagtctgttgctcaaaaagcgcgatactaggaaaaccctcgccgaagttctg
gttcctctttactctttgggcgtgcttatatttctcaagatgctcgtgccgaacccaaac
tttcctgaagtcaggaaacctggcagactattgaggatccaccacgacgccatatcagat
aaccattctgtcgctgtagtggcagattgggatactgccaatggaactttgggtttttta
gacgacataaactcgctgctcatcgaatccggccagcatcctgtcaactggatcagatat
aacaacacgacagatctaaacgatgcttaccacaacgacgccaagacgttccctctagct
gtaatttttcataccgaccccggcgcttacggcgaaccgctcagatacacaattcgtacg
aacccatcccgcgacggaggcacgccttccactaggaccctcacaacttcaccagctaaa
tgtcgagaaagaacaggatttaaagattggtcttcggactggtctagagggggacagctt
atacctctgtcagaaatgcacagggaagatacgtgtcctgtgttacagtattattataca
ggttttctggcgttgcagactctgatcgattatgttaaaattaaaatggacactgggact
cgtttctttccacctcgggtagatttacgccagtttcccaagcgtcagcatacgggagac
tggctggtgatcttcagggtgatcatgccgatgtacatggtgatgacgctgtcacagttc
atcacctatctcctaatgtttgtggtgggcgagaaggagaagaaaatacgggaggggatg
aggataatgggattgaaagatagtgtttattggggttcatggtttttaatttacgccgtt
tttgttacaattttatctatcgtcagcacagttttgctcttcactttaaaggttttccag
cactcgtcctacatcttgattttcctgttgatgcttctttttggatttactataattaca
tttgcgtttatgcttacgcctttcttcgacaaggccaggactgctggaattctgggtagt
ttcgccgttaatttgatgagcgggctgtacttcatccaggtgttcgtatccaacgctgat
tctctcgccttctggttcgtctctcttataagctccagctgttacgccctcgcaatggac
aaggctctagtgttggacatggcgggagtgggcgtgacctgggataacttgtggagcggt
cccggagtgccattcggaggcagtctcattatgatggcagtggatacagttctctatgga
ttggctgcgtactggctggacgcggttgtaccaagcgagtacggcatcaagcagaagccg
tggttctgcttgctgccgtcgttctgggtggggcggcgcgcgcgcgtggcggccgagcac
ctgcactccaacggcgacgcgctgcacaaggacatcgagcccgtgcccaaagaactgcaa
gacaaagaggcgatcagaatcgttgggcttcagaagagttttcgtcattgtcggagaccg
gaagtgaaagcgatcgacggaattgacctgagcatctacgaaggacaaataacagccgtg
ctggggcataacggtgctgggaagtccacgctcttcaacatcctcactgggctaacggcg
ccgacagctggaacagcatacgtatatggcttagacgttagggatccgaacgacatgcac
gagatacgtcagatgatcggcgtgtgtccgcagcaggatgtcctgttcgacttgctctcc
gttaaggaacatctgcagttcttcgctgctgtcaagggtataccacgtagaagaatatct
gatgaagtgcataaagctctatccgaagtcggactcctggaacaagcgtcggtattctcg
aaacatctttctggagggcagaagaggaaactcagtatagccatcgcgtttattggtgat
cctaaaataataatcctcgacgagccgacggcaggcgtggacccggtgtcgcggcggcag
acgtggcgcatcctgcagcgcgcgcgccgcgggaaggtgctgctgctcacgacgcacttc
atggacgaggccgacatcctcggcgatcggaaggccgttattagcaagggacgggttcga
tgcgctggaacatctctgtttttgaaaaacaagtttggaatcggataccatttgacgctg
gttttagacggcgcgtgccgcgagcaccagatcacgcggctggtgcgcgggcacgtgccg
cgcgcggagaaggcgcggcgccacggccgcgagctgtcgtacatcctgccgcactacgcc
gtgcacctcttcccgccgctcttccacgccatcgagcacgagatccgcgacaagaccaac
cgcctcggtataacgagttacggcgtttcgatgacgaccctggaggaagtgttcctgagt
ctggagggggagaacgcggaggagacggaggctgtggagggagtgtcgtctgtgaagctc
gtacgcgctcgcgcactctcgcgcagcctctcgctgcagagcaagaccttgagctaccag
gaattgaacgataaggaccaacagaagacgacatctctgccgacgccacccgcctcgcac
gcgctgcactccaccacgcacggcgtcgaacacgttaaggtgacccccgaggcgccggtg
gcggcggacgtgctgggcgagatggtgaagacgagcccgtcgtgctggcgcacgttctgc
gcgctcgtgtacatccgcaccgtgcgcatgatacgcgacccctacaagctctacgtcatg
atattcatgcctatcatctcttgcgcgctcggcctttacatgaagtcgcgccaaatcgtc
ttttttcgaatgcagccactcaaattggaaccgaacgcctatttcaataagacgccgatt
gcactgtacagtgaacaggataactttaaggaaatcgctgattttaaggattctttagaa
acattaggtgctcacccaatagatctattcgatggaaacttctcgagtcttctagatatg
gagaattttggagcgtttagtttgaaggatagcctaattccttttgggaaaataatggcc
tactacaatagcacgtatactcatagcttgcctattataattaacttattggacaatagt
atatacagggtattaatgacggcctccggtcagctggaaagcttcaagcctatagaggtc
ctcacccaccccttccagcagacggaacagcaggaagagttcaacttggggaacgtggtc
tgcgctatttttatgggaatgatattcgcgctcgtacccgtcacgctggctgttgacatc
gtgtacgatcgagagataaaagcgaagaaccagttacgcgtgaacggtctgtcgatgagc
atgtacttcttgacgtacttcactatcctcatcttcattatgatcgtcaccagtgccgga
gttctggttcttgtgatcctcaacgatataccaagtctaaccaacggttcagccatcacg
atgctctgcggtctgctgatcttgtacagcccgtccgccattttgttcaacacgtgcctg
tcatatatcttcgacaaaatggattccgctcagagtatcatgccaaacattaccacttgg
gtgggcgtcatacctttcatattggtagctgttttggatacttttaaatggggtagcaac
atcgcgttttatcttcacttagtgttcagttttctagacgttatgtacataccgtatgcg
atcatttattatgttgatagggtatatgtaacctgcaacctccgagggctgtgcacagtg
ccgtcactgtccagctatttcacggcggaggtgtgggtgctgatcgtggccatgctggtt
catgtgcccgtatgtggcgccgctctgttggcggcggacaggctcaagtcggggggcagg
atatgtactcgcaagggcagcgcggcggcggcggacagcgaggcggaggcgggcggcgac
ggcggcgaggacgacgacgtgcgccgagagcgccgccgcgtcgccgcgctgctagccgcg
cgcgaccacaccgcgcccgcgctgctcgtgcacaatctccgcaaggagtacaagctccgc
gggacgcgcaacggcacggcgtgctgcggcggcggcgaggcgctgcgtcgcgccgcgctg
gcgcgcctgtcgctggccgtgcagggcggggaggtgttcggcctgctaggccacaacggc
gccgggaagaccaccaccatgaagatcatcacggccgaggagcgcctcacctgcggcacc
gtgatgctgggcgggcagaacatcgaggaggcgcagtcgggcgcgttccagatgctgggc
tactgcccgcagcacgacgcgctctggaagaacgtcaccatccgcgagcacatcgagtgc
tacgccgccatccgcggcatcagcaaggccgacacgccccggatcgtggaggcgtacctg
caggggctgcagatagctgagcacgcgggcaagaacgcggaggagtgctcgggcggcacg
cgccgcaagctgtcgttcgcgctcgccatggtgggcagcccgcgcgtcgtgctgctggac
gagccctccaccggcatggacccgcgcagcaagcgcttcctctgggacaccatactcgcg
agcttccagggtagaaaaggtgctattttgacaacacattccatggaagaggctgacgct
ctgtgttctagagtcgggatcatggtgaagggtggattgaggtgtattggttcgacgcaa
catttaaagaacttgtacggcgcgggctacacgctggagatgaagataggccaacagaac
caaaaatcgacgatgttagagtcagatctgtcgttgacgccctcccccttacggtcagcg
aataattccccgtcgctgggcgaggcggatgaagggtcgggagcgggctccgcgaccgtg
gaggccgaggtggaggcggagggcgagggcgagggcgagggcgaggcggtggacgtcagc
atacacacgcccctcgtggccaacacgtcgtccgcgcgcctgcaccaccagcgcacggag
tcgggcggcggcgccagctcggaggcggccatcgcgctggtggcgcagctgttcccggcc
gcggtgctggaggagagcttcgcggagcgcctcgtgttctccgtgccgcagtcctccgtc
tccagcctcgcgagatgcttccagcagatcgaggaggcgaaagaaaagctgaacatcgtc
gaatatagctttagtcagacaacgttagagcaggtgttcctgaaattcgcacaatccgag
aacgtcgaatcttcagaccaagaacattag
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