Vanessa cardui (painted lady): 124533029
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Entry
124533029 CDS
T09161
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124533029
03036 Chromosome and associated proteins [BR:
vcd03036
]
124533029
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124533029
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124533029
SLIK complex
124533029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
124533029
NCBI-ProteinID:
XP_046964153
LinkDB
All DBs
Position
1:complement(7258442..7271396)
Genome browser
AA seq
1823 aa
AA seq
DB search
MLLKGSMNESGSDSMSEKGEKSDSSGSGSGSDSDSGSSSSGSGSAGRSGSEKSSNADRSH
LSDDTKSSPKHSIANSSKSDHHTDKDSSDDSISKRKSRNNHGKVKSDLWEDNPDIYGIRR
SARSRKEPDRLKLADSDSSERGRSHRKSRKKSNSWNSDTSDSDSDMKGSPPPPSKRPGQR
SVPLRKKKPSRRRRFTSDEDESTEASDEETRSRTATRRTGAAVSYKEASDEQTDSSDLLE
VEGEGEVEPEPEDHSETIERVLGHRRGKKGVTGNVTTVYYIEEHGDPNEGCNPDDEEATE
PQYLIKWKGWSHIHNTWESEKTISEQKVKGLKKLENYIKKEADLSWWRQQAGPEDIDYFE
CQSELQQELVKTYNFVERIFAEQTRELEGGGTAHEYFCKWESLPYADSTWEDSSLIEKRW
PAEVETFKSREAAKTTPSRHCPVLKRRPKFHQVKEQPEYMGKDQTFILRDYQMDGLNWLI
HSWCKDNSVILADEMGLGKTIQTICFLYYLFKSQQLYGPFLCVVPLSTMTAWQREFTQWA
PDINVVTYIGDVTSRNIIRQFEWSFASSKRLKFNAILTTYEILLKDRQFLRSFSWACLLV
DEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIMPYKFESWEEFEK
DHEDAATKGYEKLHKQLEPFILRRQKKDVEKSLPAKVEQILRVEMTSIQKQYYKWILTKN
YSALRKGVKGSINTFINIVIELKKCCNHALLTKPEDFESRASLATTDAVEKLLRGSGKLL
LLDKLLCRLKETGHRVLIFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGEIRKQALDHFN
AEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYR
LVTARSVEEDIVERAKRKMVLDHLVIQRMDTTGRTVLNKRDASGTSANNPFNKEDLNAIL
KFGAEELFKDDDENDEDPVCDIDEILQRAETRDEGPAMAGDELLSAFKVASFAFDEEKAV
MEVKKESNEEEGKDWDDIIPENVRKTIAEQEKNKEMEDLYLPPRRKNMQQNNADDKGGRK
RRGRSGGDGGDGGDGADGEGDVDSDISDADVSADDDRPRKRGRPPASHREKIKGFTDQEI
RRFVKSFKKFSAPLKHLDSIACDAELQEKPLADLKKLGEILQERCKAVLNDTTESTNEHN
DGRKNARKTFKLGGVPVNAKTMAACQDELAPLDDFLPQTKEERLKWQLDFRTRPANFDIE
WGVEDDSKLLAGIYQYGMGSWEAIKMDSSFVIGDKILTNEDKKPQAKHLQSRAEYLLKLI
KKLLDQKNGKQKQRKPRMKKGAKEPVTKDTVDEEMSSGNESKKGNKNAKNDKGEKGKSKL
EDILTHDETSNDRKEKDRKRTRKEGKDRPKNDKIKGRKKPAGPMHFTANNEPRALEVLGD
LDPSVFEECKEKMRPVKKALRALDNPDQTLSETEQVSRTRACLTQIGNQIDICLSEYPDP
EKKVEWRSNLWYFVSKFTNFDAKQLYRLYKYGLKKNVDGKKDGKHKENKLNAKNNINSSN
NHVKLYKKEAKHDENNRKEKRTKIEKDKIDKNNEKIPHASGVKRKLEEGECDPEPNENKR
HERHKHKQKERRDREGSLKRDDLMYRDRSRTERERERDRERDRERDRDRDRDRDRERDRD
RDRDRDRDRDRSRTRRDSGGVGPPRVRPPYAPHAHGDHAAHPSHPAHPAWTPPAYPGPRQ
YRGGERNARPHDKRRFGGYAAMGGPYSGYYEGTAMAGGMGFPPVRPYPDDWRGYTPQSDY
PYDERDYEREVYRRDYDRRAPPT
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgctcttgaagggctcaatgaatgaatctgggagtgattctatgagtgagaaaggagag
aagagtgattctagtggttcaggctctggtagtgacagcgacagtggttctagttcctct
ggatctggatcagctggcagatcaggatctgagaagtcttctaatgcagaccgatcacat
cttagcgatgacacaaaatcttcaccaaagcatagtatcgctaattcttccaaatcagat
catcacaccgataaagattcttcagatgattcaatatcaaaacgaaagtcgagaaataat
catggaaaggtaaaatcagatctgtgggaagataatcctgatatttatggtataaggaga
tcagcccgatcaagaaaagaaccagatcgactgaaacttgctgatagtgactcaagtgag
cgaggacgaagtcatagaaaaagtagaaaaaaaagcaactcatggaattcagatacctcc
gatagtgatagtgatatgaagggttccccacctccaccctctaaaagaccaggccaaaga
agtgtacctctaaggaaaaagaaaccatcgagaagaagaagatttaccagtgatgaagat
gaaagtacagaagcatctgatgaagaaactaggagtcgcacagcgacacggcgtactgga
gctgctgtcagttacaaagaagccagcgatgaacaaactgactcttcagacttattggaa
gttgaaggggagggagaagtcgaacctgaacctgaagaccacagtgaaactattgaaagg
gttcttggacataggcgaggaaagaaaggagtcactggaaatgtgactacagtttactat
atagaagagcatggagatcccaatgaaggttgtaatcctgacgatgaagaagcaactgaa
cctcagtacctgattaaatggaaaggatggtctcatatacataatacatgggagtcagag
aagacaattagtgaacaaaaagtgaaaggtcttaaaaagttagaaaactacataaagaaa
gaagcagacctttcatggtggaggcagcaagcaggtcctgaagatattgattatttcgaa
tgtcaatctgaattacagcaagaattggtcaagacttacaattttgtagaaaggatattt
gctgaacaaacgagagagttagaaggtggtggcacagctcatgaatacttttgcaaatgg
gagtcattaccatatgcagattcaacttgggaagattcttctctcatagaaaaaagatgg
cccgcagaagttgaaacatttaaaagtagagaagctgcgaaaactacgccgtcaagacat
tgtcctgttttaaaacgacggccgaaattccaccaagtaaaagaacaacccgagtatatg
ggaaaagatcagacttttatattaagagattaccaaatggatggattaaattggttgata
cattcctggtgtaaagacaattctgtcatattagctgatgaaatgggtttaggtaaaaca
atacagactatatgtttcttatattatctatttaaatcccaacaactgtatggcccattc
ctttgtgtggtccctctaagtacaatgacagcatggcaaagagaatttacgcaatgggca
cctgatattaatgttgtgacttatattggtgatgtaacaagtagaaatattatcaggcag
tttgaatggagttttgccagttcaaaaagattaaaatttaatgcaatattaacaacctat
gagattttattaaaagatagacagtttctgaggtcttttagctgggcttgtctgttagtt
gatgaagcacacaggttaaaaaatgatgattcacttttgtataaagctttgaaggagttt
gatacaaatcataggttactggttactggaacaccattacagaattccttaaaggaacta
tgggcacttctacattttataatgccatacaaatttgaatcttgggaggaatttgaaaaa
gatcacgaagatgccgcaactaaaggctatgaaaaattacacaaacaattggaacctttt
atattgagaagacaaaaaaaagatgtggagaaatctttacctgcaaaagtagaacaaatc
ttgagggtagaaatgacttccatacaaaaacaatactacaaatggattcttacaaaaaac
tatagcgcattgcggaaaggtgtaaaggggtcaataaatacatttataaatattgtgata
gaactaaaaaagtgttgtaatcatgcgctcttgacaaaaccggaagattttgaatcgaga
gcatcgcttgcaactacagatgctgttgagaaacttctaagaggctctgggaaactgcta
ttattagataaattattgtgcaggctaaaagaaactggccatagagtgcttatattctca
caaatggtaagaatgttggatatacttgctgaatatttacaaaggcgacattttccattt
caacgcctggatggaagcattaaaggagaaataagaaagcaggctcttgatcactttaat
gctgaaggctcacaagatttttgttttttgctatctacaagagcaggtggcctcggtatt
aacttggctactgcagatactgtgataatatttgactctgattggaatccacaaaatgac
cttcaagcacaagctcgcgctcatcgtataggacaaaaaaatcaggtcaatatttatcga
ttggtaactgcaaggtcagtagaggaagatatagtagaaagagctaaaagaaaaatggtt
cttgaccatttagtaattcagagaatggatactacgggccgaactgtccttaacaaacgt
gatgcctcaggcacgagtgcaaataacccttttaacaaggaagacttgaatgcaattttg
aaatttggtgcagaagaattatttaaagatgatgatgaaaatgatgaggatcctgtctgt
gatatagatgaaattttgcaaagagcagaaactagagatgagggccctgcaatggcaggt
gatgaactactttcagcatttaaagtagctagttttgcatttgatgaagaaaaggctgta
atggaagtgaaaaaagaaagtaatgaagaggaaggcaaagattgggatgacattataccg
gaaaatgtaaggaaaactatagctgagcaagaaaaaaataaggaaatggaggatttgtac
ttaccacctagaagaaagaacatgcagcaaaacaatgctgatgataaaggtggccgcaaa
cgtcgtggtcgcagtggtggggacggcggtgacggtggcgatggggcggatggcgaagga
gatgtcgacagtgacatatctgacgccgatgtaagcgcggacgacgaccgacctaggaaa
cgaggacgtcctcctgcatcgcacagggaaaagataaagggatttacggatcaggagatt
cgtaggtttgtgaaaagctttaagaagttctctgcacctttaaagcaccttgatagcata
gcttgtgatgctgaactacaggaaaaaccattagcggacctcaaaaaattgggagaaatt
cttcaagagagatgcaaagcagttttaaatgatacaacagaatctactaacgagcataat
gatgggcgtaaaaatgcaagaaagacttttaagcttggtggtgttcctgttaacgcaaaa
acgatggcagcctgtcaggacgagctcgcgcccttagatgatttcttaccacaaactaaa
gaagaaagactgaaatggcaattagatttcaggacaagacctgctaatttcgatattgaa
tggggagttgaggatgattctaagttattagctggtatttatcagtatggaatgggttct
tgggaagcgataaaaatggactcttcatttgttattggtgacaaaattcttactaacgaa
gacaagaagccccaggcgaaacatttacaatcaagagcagaatacttattaaaactaatc
aaaaagctacttgatcaaaaaaatggaaaacaaaaacaaagaaaaccaagaatgaagaaa
ggtgctaaagaacctgtaacaaaagacactgttgatgaagagatgagttcaggcaatgaa
agcaaaaaagggaataaaaatgcaaaaaatgataaaggagaaaagggaaagtctaaactt
gaagatattttaacgcatgatgaaacatccaatgacagaaaagaaaaggacaggaaacgc
acacgaaaagagggtaaagatcgacccaaaaatgataaaattaagggtcgcaaaaagcca
gctggacctatgcattttactgctaataatgaaccaagagccttagaagttttaggtgat
ttagatccatcggtatttgaagaatgtaaagaaaaaatgagaccagtgaagaaagctctt
cgtgcccttgataacccagatcaaactctctcagaaacagaacaggtatcccgaacaaga
gcttgtctaacacaaataggaaatcaaatagatatatgtttatctgaatatccagatcct
gaaaaaaaagtagaatggaggagtaatctctggtattttgtgtcaaaatttacaaatttt
gatgctaaacagttatacaggttatataaatatggtcttaagaaaaatgtagatggtaaa
aaagatggaaaacacaaagaaaataagttaaatgctaaaaacaatataaacagctcaaat
aatcatgtgaaactatataaaaaagaggccaaacacgatgaaaataatcgaaaagagaaa
agaacaaagattgaaaaggacaaaatagataaaaataatgaaaagataccccatgcatcc
ggtgtaaaaaggaaactagaggagggagagtgtgatccagaaccaaatgaaaacaaacga
catgagagacataaacacaaacaaaaggaacgcagagatagggaagggagcctgaagcgg
gacgatttgatgtacagagatcggagccggacggaacgagagagagagcgagaccgagag
cgagaccgtgaacgcgatcgtgatagagatcgagatcgagacagggagagagatcgagat
cgagatcgcgatcgtgaccgggatcgggatcgctctcgtacgcgaagggacagcggcggt
gtgggcccgccacgtgtgcgtccgccctatgcgcctcacgcgcatggcgaccacgctgcg
cacccgtcgcatccggcacaccctgcttggacgccgcccgcttatccgggtcctcgtcag
taccgtggtggcgaacgcaacgctcggccacatgataagagacggtttggaggatatgca
gcaatgggtggtccatacagtggatattacgagggtacggcgatggcaggaggaatgggt
tttcctcctgtacgtccatacccggatgattggcgtggttatacaccacagtcggactat
ccatacgacgagcgagattatgagcgcgaagtctatagaagagattatgatcggcgggcg
ccaccgacttag
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integrated database retrieval system
