Vanessa cardui (painted lady): 124533462
Help
Entry
124533462 CDS
T09161
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124533462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124533462
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124533462
Spliceosome [BR:
vcd03041
]
Complex C
Other components
Step II factors
124533462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
Flavi_DEAD
nSTAND3
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
124533462
NCBI-ProteinID:
XP_046964706
LinkDB
All DBs
Position
11:1513023..1521702
Genome browser
AA seq
1273 aa
AA seq
DB search
MDEVAKLEHLSLVSKICTELDNHLGLNDKDLAEFIIDLADKNPYFDDFKKALIENGAEFS
DSFMTNLLRIIQHMKPVPCEKEKSDDKDNKSNPLANKFPGLAIPNDKPPVFTSDEESDDD
KKNTRLTSKEIFKVESKGKESSSKDAVDEAMAALEALAPSNSNIKSDDTKKENIRKRERE
HSKDRKDSRIKRDSSRDKKSRRSVERQSRTRDKRSRSRDRRSRSRDRRSRSRDRRSRSRD
RRSRSRGRDRRRRSKSRQRHRSRSRERYRRSRSRNRRSKSRSQSRGREDRSRYRDSEFVK
KPRKKSPDVAMSDDPEPGKIYGGRVANIVPFGCFIQMEGLRKRWEGLVHISQLRAEGRVT
NVSDVVSRGDKVKVKVLSVTGQKVSLTMKDVCQETGKDLNPASHAHLEAEREGRNPDRPP
PAATVLAGLQGGLDPDEDSSRKRVTRISSPERWEIKQMISSGVIDKSELPDFDEETGLLP
KDEDGEADIEIELVEEEPPFLQGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALAKERRE
QKMLQREQEMESLPTGLNKNWIDPLPEADGRALAANMRGTGITPQDLPEWKKHVIGGKKS
SFGKKTNLSLLEQRQSLPIYKLRDELTKAISDNQILIVIGETGSGKTTQITQYVCECGLA
ARGRVACTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPDTVIKYMTDGMLLR
ECLMDLDLKSYSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFSQY
FFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEIDT
ACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTI
DGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAY
RDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSLSALD
SEGLLTRLGRRMAEFPLEPNLSKILIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALA
DQKKAKFNQPEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDR
HKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEW
VIYHELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEP
NAWRISRVRRRRN
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggttgctaagctagaacatctctcgcttgtatctaaaatatgtacagaatta
gacaaccatttagggctaaacgataaggatttagctgaatttatcatagacttggcagac
aagaatccctactttgatgattttaaaaaagctctaatagaaaatggggctgaattttct
gattcctttatgacaaatttacttcgtataatacagcatatgaaaccagtaccatgtgaa
aaagaaaaaagtgatgacaaagataataaatcaaatccgctagctaataagtttcctgga
ttagctattcctaatgataagcctccagtttttacctctgatgaagaaagtgatgatgat
aagaaaaatacaagattaacttctaaggaaatatttaaagttgagtcaaaaggaaaagaa
tcttcaagtaaagatgcagtggatgaagcaatggcagccttggaggcactggctccttct
aacagtaacatcaaaagtgatgacacgaagaaagaaaatattagaaaaagggaaagagaa
cacagtaaagatcgtaaggatagtcgtatcaaaagggatagttcaagagacaagaaaagt
agaagaagtgtagaacgtcaaagtcgtacaagggacaaaagaagcagaagcagagatagg
cgtagtagaagtagggacagacgtagtagaagtagagacaggcgcagtaggagtagagac
aggcgtagtaggagtagagggagagatagaagacgaagatctaagagtcgccaacgtcac
agatctaggtcaagagagagatatcgaagatcaagatctaggaataggaggtcaaaatcc
aggtcccagtctcgtggtagggaagacaggagcaggtatagagatagtgaatttgttaaa
aaaccaaggaaaaagagccctgatgtagctatgagtgatgatcctgagccgggtaaaatt
tacggtgggagagtggcaaatattgtgccttttggatgttttatacaaatggaaggctta
cgtaagaggtgggaaggccttgttcatatatctcagctgagagctgaaggaagagtgact
aatgtttctgatgtggtatctagaggtgataaagtcaaggtcaaggtgttgtctgtgaca
ggacaaaaagtgtcacttactatgaaagatgtttgtcaagaaacaggaaaagatttgaat
ccagcatctcatgcacacttagaggcagagcgcgaaggtcgcaaccccgatagacctccg
ccggcagccacggtactggcggggctacaaggcggtctcgatccagatgaagactcgagt
cgtaaacgcgtcactcgaatctctagtccagagcgctgggagataaaacagatgatatca
tcaggggtcatcgataagagtgagttgcccgacttcgacgaggagacaggcctactacca
aaagacgaagatggagaggctgacattgaaatagaactagtcgaggaggaaccgcccttc
ctccagggccacggtcgagccttacacgacctatcgcccgttaggatcgtgaagaatcca
gacggatcactggcacaagctgccatgatgcaatcggccctagccaaagagagaagagaa
caaaagatgctgcaaagggaacaggaaatggaaagtttaccgaccggcctcaacaagaac
tggatcgatccactaccagaggcggatggccgggccttagctgcaaacatgaggggcacc
ggcatcaccccacaggacctcccagaatggaagaagcacgtgataggcgggaagaagtcg
tcgttcgggaagaaaactaatctatcccttctcgagcagcggcagtccctgcccatctac
aagctgagggacgagctgactaaggcgatatcggacaaccagatcctgatcgtgatcggc
gagacggggtcgggcaagacgacgcagatcacgcagtacgtgtgcgagtgcgggctggcg
gcgcgcgggcgcgtggcgtgcacgcagccgcgccgcgtggccgccatgtccgtggccaag
cgcgtggccgaggagttcggctgccgcctcggacaggaggtcggctacaccatccgcttc
gaggactgcacctcgcccgacaccgtcattaaatacatgacggacggcatgttgctccgc
gagtgtctgatggacttggatctgaagagctactccgtcatcatgttggatgaggcccac
gagcgcactatacacacggacgtcctcttcggtcttctgaagcaagccgtgcagaagagg
cccgagctgaaactgatcgtgacgtcggccaccctcgacgccgtcaagttctcgcagtac
ttcttcgaggcccccattttcacgataccgggacgaactttccccgtcgaggtgttgtac
acgaaggagccggagacggactacctcgacgcgtcattgattaccgtcatgcaaatccac
ttgcgggaaccgcccggtgatatactgctgttcttgacgggtcaggaggagatcgacact
gcctgtgaaatattatatgagaggatgaagtccttgggacccgatgtgcccgagttgatc
atcctgcccgtatattcggcgttgccttcggaaatgcagacaagaatcttcgagccggcg
ccgccggggtcgaggaaggtggtcatagccacgaacatagcggagacttccctgactatt
gatggtatatattacgtcgtagaccccggctttgttaagcagaaggtgtacaattctaag
actggcatggactcgttggtcgtaaccccgatatctcaggcggcagccaagcagcgcgcc
ggtcgtgccggccggacgggacccggcaagtgctaccgactgtacaccgagcgcgcctac
cgcgacgagatgctgcccacgccggtgccagaaatacagcgcaccaacctcgccaccacg
gtcctgcagctgaagacgatgggcattaacgatcttctgcattttgacttcatggacgcg
ccgccagtggagtcgctcatcatggcgctggagcagctgcactcgctctctgccctggac
tccgaggggctgctcacgagacttggccgacggatggctgaattcccgctggaaccgaat
ctttcgaaaatccttattatgtcggtagcgctgcagtgctctgatgaaatattgacgatc
gtatccatgctgagcgttcaaaacgtattctatcgacctaaagacaaacaagctctggct
gatcagaagaaagcgaagttcaaccagcccgaaggagaccatctgactttactagctgtt
tacaacagttggaagaataacaagttttcgaatgcgtggtgctatgagaacttcgtgcag
atcaggacgttgaaacgggctcaggatgtcagaaaacaactgctcggtatcatggatagg
cacaaactagatgtggtatcagccggcaagaacacagtaaggattcagaagacaatatgc
tctggcttcttccgaaatgctgcaaagaaagatccacaagaaggctaccggactctagtg
gacagtcaagttgtgtacattcatccttcaagtgctttgtttaatagacagcctgaatgg
gtcatctaccatgaactagtacagaccaccaaggaatacatgcgtgaggtgactacaatc
gaccccaaatggctcgtggagtttgcaccagcctttttcaagttttctgacccgacgaaa
ctgtctaaattcaagaagaaccagagattggaacccctgtacaacaaatatgaagaaccc
aacgcttggagaatatcaagagttcgacgacgcagaaattaa
DBGET
integrated database retrieval system
