Vanessa cardui (painted lady): 124533680
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Entry
124533680 CDS
T09161
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124533680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124533680
Spliceosome [BR:
vcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124533680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Erf4
Motif
Other DBs
NCBI-GeneID:
124533680
NCBI-ProteinID:
XP_046965064
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Position
11:3972976..3993117
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AA seq
499 aa
AA seq
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MSLADELLADLEENDDGDLEAIYENQISNTDAHEFTAPFPVIPKEEEIKNVSIRELAKLR
DSERLKRVITEIEQNVGNDRKKIEVTGLMESDPEYQLIVEANNIAVEIDGEIAIIHRFVR
DKYQKRFPELESLIITPLEYIRTVKELGNDLDRAKNNETLQSFLTQATIMIVSVTASTTQ
GKLLSDNELQEIFEACDMASELNNFKSNIYEYVESRMTFIAPNITAIVGASTAAKILGVA
GGLSKLSKMPACNVLPLGQQKKTLSGFSQAASLPHTGFLYFSQIVQDTSPELRYKAAKLV
STKLTLAARVDACHESADGSIGRYLREGIEKKLDKLQEPPPVKFVKPLPKPIEQSRKKRG
GKRVRKMKERYAMTEFRKNANRLNFADIEDDAYQEDLGYTRGTIGKSGTGRVRLPQIDEK
TKVRISKTLQKNLQKQNQQYGGATSIRRQVSGTASSVAFTPLQGLEIVNPQAAETRINEA
NAKYFSNTSGFLSVGKETT
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtccttagcagacgaattgctggcagatttggaagagaatgatgacggagatctagaa
gctatatatgaaaaccagattagtaatactgatgcacatgaatttactgcaccttttcca
gttataccaaaggaagaagaaataaaaaacgtatctatcagagagttggctaagctcaga
gattcggaacgcttaaaaagggttataactgaaatcgagcaaaatgttggcaatgataga
aagaaaattgaagtgactggattgatggaatcagatcctgaatatcagttgattgtcgaa
gctaataatatagctgttgaaatcgatggagaaatagctattattcacagatttgttcgt
gataaataccaaaagaggttcccagaactggagtctttgataataacacctttggagtat
atacgcactgtgaaagaactgggcaatgatttggatagagctaagaataatgaaacactg
caaagttttttgactcaagctactattatgattgtgtctgtcactgcatctacaacacag
ggaaaactgctgtctgacaatgaactgcaggagatctttgaagcatgtgatatggcatcg
gaattaaacaactttaaatctaatatttacgaatatgttgagagcagaatgacatttata
gctccaaatataacagctatcgtgggtgcgtcgactgcagctaagatcctcggtgtggcg
ggtggtctatccaaactttcaaagatgccagcatgcaatgtgctacctctagggcaacag
aagaagacactctcaggattctctcaagcggcatcactgccgcatactggatttttatat
ttctcacaaatcgttcaggatacatctccagaattgcgctataaagctgccaagctcgtg
tcaactaaactgacgttggccgcccgagtggacgcttgtcacgaaagtgcagacggaagt
attggacgatatctcagggagggaattgaaaagaaattagacaaactgcaggagccgccg
ccggtgaaatttgtgaaaccgctgcctaagccgatcgagcagagtcgcaagaagcgcggc
gggaagcgcgtgcgcaagatgaaggagcgctacgccatgacggagttccggaagaacgcc
aaccggctcaacttcgcagacatcgaagacgacgcttaccaagaagatttgggctacacg
cgcggtacgatcggcaaatcggggaccggacgcgttcgtctacctcagattgatgagaag
acgaaagttcgaatcagtaaaacattgcagaaaaatctccaaaaacagaaccagcaatac
ggtggagccacgagtatacggagacaggtttctggtaccgcgtcctcggtcgccttcacg
cctttgcagggtctcgaaatcgtcaatccacaagcagctgaaacgcgaattaacgaagca
aatgctaaatacttctccaatacatctggtttcttatcagtgggaaaagaaacgacgtaa
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