Vanessa cardui (painted lady): 124533985
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Entry
124533985 CDS
T09161
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124533985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcd03021
]
124533985
Enzymes [BR:
vcd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124533985
Transcription machinery [BR:
vcd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124533985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
SURF2
Motif
Other DBs
NCBI-GeneID:
124533985
NCBI-ProteinID:
XP_046965531
LinkDB
All DBs
Position
12:complement(11560547..11566322)
Genome browser
AA seq
1657 aa
AA seq
DB search
MDFNSRFTSAVTGLTSVHPDSIQFLMFNDEDIKKLSVAKITNMTSFDSMGNPTKAGLYDP
ALGPIRERNDFCTTCTNTLINCPGHFGHIELPLVVVNPLFIKNIYTLFRITCLKCFKIQM
DDRMKFILKLQLELLDAGQVTAALDLENFVGDVKDNKKDDESPTKPNKVIRKYQKLLKNR
DAISEIFQNKNTFKLRTKIINNFFKAITVSKTCLYCRSKLIKVTTSDNKIMYNLSAEGGG
KGIKILMPDDLKLYCKAIEQNDEDILTHCFPILKYANTKPITSVFFMQVVPVLPPNVRPC
NIVNGELIEHPQTNVYKTIMVTANNARVVLQVLTASDQQKAIDSLDQQPRQAYESVMGKS
PPEKLHTLWQELQKHINQLLSCEGQGVTSQGLKQILEKKTGVIRMHMMGKRVNFAARSVI
TPDPNVDIDEIGIPDAFATKLTYPVPVTEWNVDELRKMVINGPNKHPGAEKLEVKNGRTI
RIPPDSIEKRKSLAKKLLTPDEYKTSGVKIVHRHLVNGDVLILNRQPSLHKPSMMAHRAR
ILKGEKTLRLHYANCKSYNADFDGDEMNAHFPQNEVARSEAYNIMSVRKQYLVPKDGTPL
SGLIQDHVISGVRMSLRGTFFTKADYQQLVFQALSNHKGEIKLLPPTILKPVTLWSGKQV
LSTIIINNIPKGKPYISLTGKAKISAKAWQKEPPRPWNYGGTPFSNSNEMSEAEVVIRKG
ELLCGVLDKTHYGATPYGLVHCMYDLYGGDSSSAVLSSFSKGFTFYLQWIGFTLGVKDIL
VVEEADKKRDEIISLVRQAGRVAGVKATELPADVDDNNLKDTIGEMLVKDPKFRANLDRQ
YKNMLDSYTNNINTVCLSEGLLEKFPSNNLQLMVQSGAKGSTVNTMQISCLLGQIELEGK
RPPLMISGRSLPSFPPYDISPRAGGFIDGRFMTGIQPQEFFFHCMAGREGLIDTAVKTSR
SGYLQRCLIKHLEGLSVAYDNTVRDADSSVIQFAYGEDGLDVLKCQFLKQSQLEFLDVNS
NAVVAKSIIKKLKENTDSKIITKCQKSLKKWKKKYGNPFEKVRTSGFTQFSAIVKKDIDL
DEKPTDETRDPYYWELEKMWRSLDEEEKQQYMRKPCPDPIPSKMSPEYKFGTINEQLDGL
IQSYLKKRHEGSHNEYTEKDKFVEIIGAKYLFSMAAPGEPVGLLAAQSIGEPSTQMTLNT
FHFAGRGDMNVTLGIPRLREILMTASAKLKTPSMDIPFKPNISGLNKKAERLRQKMNRVT
VSDVLEKIDVQCEIVTSPQRQLKTTMRFMFLPHSQYKTQYALKPPQIIKHMQNKFFNEMF
SVIRKQAKATCGVLWAAEKEKKRRTAGSDDEEDEEISAEPKDRADDNPEIDSSDDEGPND
DDDNTEIRNRKKRSEDQEYEDPESGEEERSEDEAEDEQQMKENDDEVEITQDINADDRKI
MANVVENINSATNYTFDTKNHQWCELTVLFPIAFLRVDLSQALRDAAMRSVVYEIKNIKR
AITNREKDVLYIKTEGINIVQMFKYNNLLDLNKLYSNDIHAIANTYGIEAANKVIIKEIQ
NVFNVYGITVDPRHLSLVADYMTYNGVFEPMSRKGMEASTSPLQQMSFESSLIFLKEAVL
NSKKDFIRSASSCLMMGQPCRSGTGAFSVQHYSKVVS
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaactcgaggtttacttccgccgtgacgggattgacatccgttcacccagat
tcgattcaattcctaatgtttaatgatgaggacatcaaaaaacttagtgtggcaaagatt
acaaacatgacgtctttcgattctatgggtaacccaaccaaagccggtctctacgatcct
gccttaggaccaatcagggagcgaaatgatttttgtacaacgtgtacaaatactctaata
aattgccctggacatttcggacatattgaactaccccttgttgttgttaatccattattt
ataaagaacatttatacactttttcgtataacttgcctcaaatgttttaaaatccaaatg
gatgatcgtatgaagtttatattaaaactacagttagaattacttgatgcaggtcaagtt
acagctgctttggatttggaaaattttgtaggtgatgttaaagataataaaaaggatgac
gaatcaccaacaaaaccgaataaagttataagaaagtatcaaaagcttttaaagaatagg
gatgctatttcagagatatttcaaaataagaacacatttaagttacggactaaaattatc
aataatttctttaaagctataaccgtatctaaaacttgtctatactgcagaagtaaatta
attaaagtaacaacatctgataataagattatgtacaatttgagtgctgagggtggtggt
aagggtatcaaaatattaatgccagatgatttaaaactctactgcaaagcaatagagcaa
aatgatgaagacattcttacacactgtttcccaatacttaaatatgcaaacactaaacca
attactagtgtattttttatgcaagtagtcccagtgttaccacctaatgttagaccatgc
aacatagtaaatggagaattaattgaacatcctcagacaaatgtgtataaaactataatg
gttacggcaaataatgcaagggtagttttgcaagttttgacagcatctgaccagcaaaaa
gcaattgatagccttgatcaacaaccaagacaagcctatgaaagtgttatgggtaaatca
ccaccagaaaagttgcacacattgtggcaagaattacagaaacatataaaccaattactc
agttgtgaaggccaaggtgtaaccagtcaaggattgaagcagatacttgaaaagaaaact
ggtgtaataaggatgcatatgatgggtaaaagagtaaattttgcagctcgttcggttatt
acaccagaccctaatgtagatatagatgaaataggtattccggatgcgtttgctactaaa
cttacatatcctgtacctgttactgagtggaatgtggatgaactaagaaaaatggttatt
aacggcccaaataaacatcctggagctgaaaagctcgaagtaaaaaatggtagaacaata
agaatacctccagattcaatagaaaaaagaaaaagtcttgcaaaaaaattgcttacacca
gatgaatataaaacatcaggagtgaagatagttcacaggcacttggtgaatggtgatgta
ctaatattaaatcgacaaccatcattgcacaagcccagtatgatggctcacagagctaga
attcttaagggtgaaaaaactcttagacttcactacgccaattgtaaatcctataacgct
gattttgatggtgatgagatgaatgcacatttcccgcaaaatgaagttgctagaagcgag
gcttataatattatgtctgtaaggaagcaatatcttgtaccaaaggatggaactccacta
agtggcttaattcaagatcatgtcatatcaggagtgaggatgtctttacgtggtaccttc
tttaccaaagcagattatcaacagctagtttttcaagcattatctaatcacaaaggtgaa
attaaattacttcccccgactattttaaaaccagtgacactgtggtcgggtaaacaagtt
ttgtctaccataataataaataacatacctaaaggtaaaccctatatttctctaactggg
aaagcaaagattagtgcaaaagcatggcaaaaagaacctccaagaccttggaattatggg
ggtaccccattttcaaattcaaatgaaatgtcggaagctgaggtggttattagaaaagga
gaacttttatgtggagtattggataagactcactatggagcaacaccttatggcttagtc
cattgcatgtacgatttatatggaggagacagttctagtgcagttttaagttcattttca
aagggttttactttctacttgcaatggattggttttactcttggtgtcaaagatattctg
gttgtagaagaagctgataaaaagcgtgatgaaataatatctttagtccgacaggctgga
agagttgctggtgtaaaagcaactgaattacccgctgatgttgacgacaataatcttaaa
gacactatcggtgaaatgttggtaaaagatccgaagtttcgtgcgaatttggacaggcaa
tataaaaacatgctagactcatacactaataatatcaacaccgtttgtctgtccgaagga
ttgttagagaaattcccttcaaacaatttacaattaatggtgcaatcaggagcgaaaggt
tcaaccgttaatactatgcagatttcatgcttattaggtcaaattgaattagaaggcaaa
agaccgcctttgatgatttctggacgatcactaccaagtttccctccctatgatatatct
ccaagagcaggtggtttcatagatggtcgcttcatgactggaatacaaccacaggaattc
tttttccattgtatggctggtagagaaggtcttattgatacggctgtaaaaacaagtcgt
tcgggttacttacaaagatgtttaattaaacatttagaaggattaagtgttgcctatgat
aacacagtcagagatgccgacagcagtgtcattcaatttgcatatggtgaagatggactt
gacgttttaaaatgtcaatttttaaaacaaagtcagctagagtttcttgatgtaaattcc
aatgccgtcgtcgcaaaatctatcattaaaaaacttaaggaaaatacggatagcaaaatt
atcacgaaatgtcaaaaatcgttaaaaaaatggaaaaagaaatacggaaatccttttgaa
aaagttaggactagtggttttacacagttttctgctattgttaaaaaagatattgatcta
gatgaaaaaccaactgacgaaactcgtgatccttattactgggaactagaaaaaatgtgg
cgctctttagatgaagaagaaaaacaacaatacatgagaaaaccatgtccagatccgatc
cccagtaaaatgtcacctgaatataagtttggtactattaatgaacaattagacggtctg
atccaaagctatttaaagaaacgccatgaaggttcacataatgaatacacagagaaagat
aaattcgttgaaattatcggtgctaaatatttgttctcaatggcagcgcccggagagcct
gttggacttttagctgcgcaatcaattggtgaaccatcaactcagatgacgttgaacacc
tttcactttgctggtagaggtgacatgaacgttactttgggtataccccgtttgcgagaa
attttgatgacagcttcagcgaaattgaaaactcccagcatggatataccttttaaaccc
aatatttctggtttaaataaaaaagcggaaagactccgacaaaaaatgaatagagtaaca
gtgtctgatgtcctcgaaaagattgatgtccaatgcgaaatcgttacaagcccacagcga
cagttaaaaactacgatgcgttttatgttcttaccccattctcaatataagactcaatac
gctttgaaaccaccgcaaataataaaacatatgcaaaataaattctttaatgagatgttt
tcggtaattcgtaagcaagctaaggcaacttgcggtgttttgtgggcggctgaaaaagaa
aagaaacgtcgtactgcaggaagtgatgatgaggaggacgaagagatttcggcagaaccc
aaagaccgagccgatgataatccagaaattgatagttctgatgatgaaggccccaacgac
gatgatgataatactgaaataagaaaccgtaaaaaacgttcagaagatcaagagtacgaa
gatcctgaatcaggagaagaagagagatcagaagatgaagcggaagatgaacaacagatg
aaagaaaatgatgacgaagttgaaataactcaagacataaacgccgatgaccgcaaaata
atggcaaatgtcgtcgaaaatataaacagcgccacaaattacacatttgacacgaaaaat
caccaatggtgcgagttaaccgtgcttttccctattgcgttcttaagggttgatctgtct
caagcgttacgcgacgcggcgatgagatcagttgtatatgaaattaaaaacataaaacgt
gctattactaacagagaaaaggatgtcctatatataaaaacggaaggtattaatatcgtt
caaatgtttaaatataataacctacttgatttgaacaagttatacagcaatgacattcac
gctatcgctaacacgtatggaatagaggcagcgaataaagttataataaaggagatccaa
aatgttttcaacgtttacggtatcacagtagatccgcgccatttgagcttggttgcagat
tacatgacgtataatggtgtgtttgaaccaatgagtcgtaaaggaatggaggcatccact
tcacctttacagcagatgtctttcgagtcatcattgatatttttgaaggaggctgttttg
aattcgaagaaagattttataaggtctgcttcgagttgtcttatgatgggtcagccttgt
cgcagcggtactggagcgttcagtgtgcaacattacagtaaagttgttagttaa
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integrated database retrieval system
