Vanessa cardui (painted lady): 124534015
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Entry
124534015 CDS
T09161
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124534015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124534015
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124534015
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124534015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124534015
NCBI-ProteinID:
XP_046965586
LinkDB
All DBs
Position
12:1624924..1647582
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AA seq
703 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLISSIDALNLQIDLFESEVESLLVGKKKRLDKEKQDRMEELKFKLERHRFHIK
KLETLLRMLDNMSVEVEQMIHCSAKATFPLEKIKRIKEDVEYYIVSSLEPGYEENEYIYE
DINGLDEIELSGVGLPSSATTDSNNSNDSPGSPTSILSGTSPIASPALDLHNHATDSIDV
DKKKKEEVTTKPVKPLPLRVTCGVSSSPANVSLLNNSAASTNSINNTCASGASTPIKQPA
PPSPHLARPSEVVENGPVSSAPLLPAALPAHAALAAHVALAAHSAPKAEEQIVHLMTSKS
ASSTTLASSAATSTVASVVTSALASGAPSPLTVNGPTHALAHTPQHIVNNGRVSEPPLTP
ALSASAAGAAGAAGGAGGAGAGGTASLKSMAQEAVQRAGLDHHHDQTSAALSRRGLSLSQ
AHIPPLLGVAPLGPLPLNNDHQVQFQMMEAAFYHMPHPSDSERTRVYLPRNICQTPVYYN
QVLLPHSDSVEFFQRLSTETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHE
EPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaaattacaaggtgagatagacaggtgtttaaaaaaggtcacagaa
ggggtggagacgtttgaggacatctggcagaaggtacacaatgcgacgaacagtaatcag
aaggagaaatatgaggcagatctcaagaaggagattaaaaaactccagaggctacgagat
caaatcaagtcatggatcgcttcgggcgagattaaggataagagtacacttttagaatat
aggaaactaattgaaacgcaaatggagaggtttaaagttgttgaaagagagacgaaaaca
aaagcatactctaaagaagggctaggtgcagcgcaaaagctggacccagcacaaaaagag
cgggaggagatgtcctcatggcttatatcttctattgatgcacttaatttacagattgat
ctttttgagtctgaagtggaatcactattagttggtaagaaaaaacggctggataaagag
aaacaggaccgcatggaagagctcaaattcaaactagaaagacataggttccatataaaa
aaacttgaaacattattacgaatgctagacaacatgtctgtggaagttgaacagatgatc
cactgctcggcaaaggctacatttcctcttgagaagataaaaagaataaaggaagacgtt
gaatactacatagtgtcatcattagagcctggttacgaagagaatgagtacatctatgaa
gacatcaacggactggatgagattgagctaagcggagtagggttaccatcatcggccacc
actgacagtaacaacagcaatgactcgcccggatcacccactagtatactctcaggaacg
agtccaatcgcgtctccggcgctcgacctacacaaccacgcgacggactcgatagacgtc
gacaagaagaaaaaggaggaggtcacgaccaaaccggtcaaaccgctgccgctgcgggtg
acgtgcggcgtcagtagtagtccggctaacgttagtttgctcaataactccgccgcatcc
acgaatagtataaacaacacgtgcgcgtcgggcgcgtcaacgcccatcaagcagcccgcg
ccgccctcgccgcacctcgccaggcccagcgaagtagtggagaatgggccggtgtcgagc
gcgccgctgctgccggccgcgctgcccgcgcacgccgcgctcgccgcgcacgtggcgctc
gccgcgcactccgcgcccaaagcagaagagcagatcgtccacctaatgacatcaaaaagc
gcgtcgtcgacgacactcgcgtcgagcgcggcgacgtcgaccgtcgcgagcgtggtgacg
agcgcgctggcgtccggcgcgccgtcgccgctcaccgtcaacgggcccacgcacgcgctc
gcgcacacgccgcagcacatcgtcaacaatgggcgagtgagcgagccgccgctgacgccg
gcgctgtcggcgagcgcggcgggtgcggcgggcgcggcgggcggcgcgggcggcgcgggc
gcgggcggcacggcgtcgctcaagagcatggcgcaggaggccgtgcagcgcgccggcctc
gaccaccaccacgaccagactagcgcggcgctgtcgcggcgcggcctgtcgctgtcgcag
gcgcacatcccgccgctgctgggcgtggcgccgctcggcccgctgccgctcaacaacgat
caccaggtgcagttccaaatgatggaggccgcgttctaccacatgccgcacccgtccgac
tcggagcgcacgcgcgtctacctgccgcggaacatctgccagacgcccgtctactacaac
caggtgctgctaccccactcggactctgtggagttcttccagcgcctgtcaaccgagacc
ctattcttcgtgttctactacatggagggcacgaaagcgcagtacctcgccgccaaggcg
ctcaagaagcagagctggcgattccacacgaagtacatgatgtggttccagcgacacgag
gagcccaaggtcatcaatgaggagtatgagcagggcacatacatatacttcgactacgag
aagtggggccagcggaagaaggagggcttcacgttcgagtacaagtacttagaggaccgc
gacctcaactga
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