Vanessa cardui (painted lady): 124534122
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Entry
124534122 CDS
T09161
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcd03036
]
124534122
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124534122
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
HHH_3
T2SSK
Motif
Other DBs
NCBI-GeneID:
124534122
NCBI-ProteinID:
XP_046965770
LinkDB
All DBs
Position
12:complement(2001119..2011628)
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AA seq
873 aa
AA seq
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MSESTSPSVLSYLRQYRFQRKPTPGSSGTLTVTSAPSSNQQQIRMPAPNTAIRNGPIVYK
RIRIQDSDSDDSASPAKKPIVELTTAVKERRFRNMLEMFPDISPLFVKNTLVKHGWNEER
SRDELLKHDPESDDKASPSTFFASRPGFSGQMPKSNGMGVVRVTSGPSVVVRKSLAGKGG
RARRGSSGSEDDDYGVRKGKDERVYDSDDSDNEITDDLVGDKRKVFEFLNTSNMNELSLL
SGCSQKKAEAIIAQRPFKGWLDMVEKFNNNKMLSTDLLNSTQELLCTRNNIQRLMKKCVG
LAQQLESAVAAGAGRLKQPTTLDSSLKLAPYQLVGLNWLAVLHKQGVSGILADEMGLGKT
VQVIAFLAHLKETGQARGTHLVVVPASTLDNWSSELARWCPSLRVSKYYGNPEERRLLRI
EYSRGLDQIDIVLTTYTMVSSCPEERKMFRITPMHYVIYDEAHMLKNMSTQRYDNLLKIK
SKHRLLLTGTPLQNNLVELMSLLCFVMPHMFSGKTDDLKSLFQKNAKAKTTKKTNGTKED
DVPAFEQSQITQAKRIMKPFVLRRLKRDVLQDLPKKTNHTELCPMSEKQQRQYKDLIAGF
SAKDGTIHATTEQSGISMMMDMRKLANHPLLLRYHYDATVTRKMAARLARDPAHKEKNEQ
YVFEDLMCMSDFQMHQLTQQYSCIRSFSVPDHLIEDSGKFLKLDEMLPKLKEEGHRVLIF
SQFTMMLDILEPYLRLRNYRYLRLDGSTAVNERQDLIDRYNAEDIFVFLLSTKAGGLGIN
LTAADTVIIHDIDFNPYNDKQAEDRCHRMGQTRPVEIYRLLSAGTIEEGIYQVAQEKLNL
EKHVTGADENEGTEQKNVVRLLSAALGLTSPNK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagtactagccctagtgtgttaagttatctaagacagtatcggtttcaaagg
aaacctacccctggatccagcggaaccttgacagtaacatcagccccatcgagcaatcaa
caacaaataaggatgcctgcaccaaacacagcaatcagaaatggaccaatagtatacaaa
cggatcagaatacaggactcggactctgatgattctgcttctccagctaagaaaccaatt
gttgaattgaccacagcggttaaggagagaaggttcaggaacatgctggaaatgttccct
gatatatcgcccttgttcgtcaaaaacactctggtcaaacatggttggaacgaagagaga
tcgcgtgatgagcttctgaaacatgaccctgaaagtgatgacaaggcctcaccgtcaaca
ttcttcgcatctcgtccagggttctcagggcaaatgcctaaatccaatggaatgggtgta
gtcagagttacgagtggacctagcgtggttgtcaggaagtccttggccggtaaaggtgga
agggcacgaagaggcagcagtggcagtgaagacgacgattatggagtcagaaaaggaaag
gacgaaagagtctacgatagtgacgattctgacaacgaaatcactgacgatctcgtgggc
gacaagaggaaagtattcgaattcctaaacacgagcaacatgaatgagctctcgttgctc
agtggctgctcgcagaagaaagcggaggcaatcatagcacagagaccattcaaaggatgg
cttgatatggtagagaagtttaataataacaagatgctgagtacggatttattgaattca
actcaagagctcctttgtacgagaaacaatatacagagattgatgaagaagtgcgtcggt
ctcgctcagcagttggagtccgcagtggctgcgggggcgggccggttgaaacagccgacc
acattagattccagtttaaaattagcaccataccaactagtaggtctcaactggctggct
gtactccacaagcagggcgtgtccggtatccttgctgatgaaatgggcttagggaaaacc
gtccaggtgattgccttcctcgcacacttgaaagagacagggcaagcccgggggacgcat
ttggtcgttgtaccggcctccacgttagataattggagtagcgagttggcccgctggtgt
ccgtcactacgtgttagcaagtactacggtaacccagaggagaggcgactacttcgcatt
gagtactcgcgaggattagatcaaattgacatcgtccttaccacctacacaatggtgagc
agctgtcccgaagaacgcaagatgttccgtatcacaccgatgcactatgttatatatgac
gaggctcatatgctcaaaaatatgtccactcaaagatatgacaatttactaaaaataaag
tctaaacatcgactgctactaacggggacacctttacaaaacaacttggtcgagttgatg
tcacttctatgctttgtgatgcctcacatgttctccggcaaaactgatgacttgaagagc
ttgttccaaaagaatgcgaaagcaaaaacgacaaagaaaacaaatggtaccaaagaggat
gacgttccagccttcgaacagagtcagataacacaggccaagcgtattatgaagcctttc
gtactacggaggctgaagcgcgacgtactacaggacttgcctaagaaaacgaaccacaca
gaactgtgccccatgtccgagaaacagcagagacagtataaggatctcattgccggattc
tctgcgaaggatggcacgatccacgcgactacggagcagagcggcatatcgatgatgatg
gacatgcgcaagctggccaaccacccgctgctgctgcgctaccactacgacgcgaccgtc
acgcgcaagatggcggcgcgcctggcccgcgaccccgcgcacaaggagaagaacgagcaa
tacgtgttcgaagacctcatgtgcatgtcagacttccagatgcaccaactcacccagcag
tattcgtgtattagatcattctcggtgccagaccatttgatagaagattctggtaaattc
cttaaattggatgagatgttgcccaagttgaaagaggaagggcacagagtcctaatcttc
agccagtttacgatgatgctggacatcctcgaaccttacctccgattacgtaactatcgc
tacctaaggcttgacggcagtactgctgttaatgagagacaagatctaatagatcggtac
aacgctgaggacatattcgtgttcctgttgtctacaaaggcaggaggtctcggaataaat
ctaacggctgcagatactgtcatcattcatgacattgatttcaacccatacaatgacaaa
caggctgaggacagatgccacagaatgggtcaaactcgtcccgtagagatataccggttg
ttaagtgcgggtacaatcgaggagggcatataccaagtggcacaagagaagcttaacctt
gaaaaacatgtaacgggtgccgacgaaaatgagggcactgagcagaagaatgtagtgcgt
ctactgtcagcagccctgggattgacttcgccaaacaaatga
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