Vanessa cardui (painted lady): 124534242
Help
Entry
124534242 CDS
T09161
Name
(RefSeq) FACT complex subunit Ssrp1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcd03000
]
124534242
03036 Chromosome and associated proteins [BR:
vcd03036
]
124534242
Transcription factors [BR:
vcd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
124534242
Chromosome and associated proteins [BR:
vcd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
124534242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_WDHD1
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
124534242
NCBI-ProteinID:
XP_046965932
LinkDB
All DBs
Position
12:3967846..3976095
Genome browser
AA seq
726 aa
AA seq
DB search
MEFLEYNDVTAEIKGTMVPGRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWG
LRLFLKNGTLHRYGGFKDGEQEKVAKFFKSNYHKDMLEKELSLKGWNWGTAKFNGAVLSF
NVGTNTAFEIPLHYVSQCNTGKNEVTLEFHQNDDTPVSLMEMRFHIPTSELAGDMDAVEA
FHQQVMNKASVISVSGDAIAIFRELQCLTPRGRYDIKVFQTFFQLHGKTFDYKIPMSTVL
RLFLLPHKDTRQMFFVVSLDPPIKQGQTRYHYLVLLFGIEEETSLELPFTEEELKEKYEG
KITKELSGPTYEVLAKIMKVIINRRVTGPGDFLGHHKTPAIACSYKAAAGYLYPLEKGFI
YVHKPPVHIRFEEIASVNFARGGASSTKSFDFEIELKSGSIHTFSSIEKGEYDKLFDYIT
SKKLHVKNTGKNVSKFTDKALYDDDFGDSDTEKEPDAYLERVKAEAKERESDDSDDESTD
EDFNPDKAKESDVAEEYDTNPSSSEDSDASGASADSKKEKKKEKKPKKTITISEAPRKRK
EKSKKREKDANAPKRPSTAFMLWLNENRKGILEDNPGIKVTEIAKKGGELWRDLKDKTEW
EEKANKAKEEYNQAMKKYKDSGAADEFKQKKKQAEKERKAADKKTKAPASKKVKTVAASS
SSGKFTSKEYIDDDDSSSDSDKEKKDKKDKKDNKESKESKKEKAKHSSSEAASSGSDETG
SGSDSD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggagttcttagaatataatgatgtaaccgctgagataaaggggactatggttcccggg
aggttaaaaatgacagatcaaaatataatattcaaaaatagtaaaacaggcaaagttgaa
cagatttcagccaatgatattgaacttgttaattttcaaaagttcataggatcgtggggc
ttaagattgtttttgaaaaatggcacattacacagatatggaggcttcaaggatggggaa
caagagaaggttgcaaagtttttcaagagcaactaccataaagatatgctggaaaaggaa
ctttcactcaagggatggaactggggtacagctaagttcaatggagctgtactaagtttc
aatgtcggaaccaacactgccttcgaaatacctttacactatgtgtcacaatgcaatact
ggaaaaaatgaagtaacacttgaattccatcagaatgatgatacacctgtctcattgatg
gaaatgagattccacatacccacaagtgaactggcaggtgacatggatgctgttgaagca
ttccatcagcaagtcatgaataaagcaagcgttatctctgtctctggggatgctattgcc
atcttcagggagttgcagtgtcttactcctcgtggtcgctacgacattaaagtattccaa
acatttttccaacttcacggtaaaacgtttgactacaagatcccaatgtcgacagtgtta
cgactattcttactgccgcacaaagacacgagacaaatgtttttcgtggtatcactggac
cctcccatcaaacaaggtcaaacgagataccactatttagtattgttgtttggtattgaa
gaggaaacaagtctggagctaccttttacagaggaagaattgaaggagaaatatgagggg
aaaatcacaaaagaattatcaggaccaacttatgaggtgctcgctaaaataatgaaagtt
atcatcaacagaagagtcacaggacctggagacttcttagggcaccacaagacgccggcc
atagcgtgctcgtacaaggcggcggcgggctacctgtacccgttggagaaaggcttcatc
tacgtgcacaagccgcccgtgcacattcgcttcgaggagatcgcatccgtcaacttcgcc
agaggcggcgcgtcttcaaccaagtccttcgatttcgagatagaactgaaatccggcagt
attcacacattcagcagtatagagaagggagaatacgacaaactatttgattacattaca
tccaagaagctccatgttaagaacactggaaagaatgtaagtaaatttacggacaaggcg
ctgtacgacgacgacttcggcgactcggacacggagaaggagcccgacgcctacctcgag
cgcgtcaaggccgaggccaaggagcgggagtccgacgacagcgacgacgagagcaccgac
gaggacttcaaccccgacaaggccaaggagagcgacgtcgccgaggagtacgacacgaat
ccgtcatcatccgaagactctgacgcatcgggtgcctctgctgacagcaaaaaagaaaag
aagaaagagaaaaagcctaaaaagaccatcaccatttcggaagctccgcgcaagcgtaaa
gaaaagtccaagaagcgtgaaaaagatgcgaacgcgccgaagcggccctcgaccgccttc
atgctgtggctcaacgagaaccgcaagggcatactggaggacaaccccggcatcaaggtc
acggagatcgctaaaaagggcggcgaactgtggcgcgacctcaaggacaagactgaatgg
gaagaaaaggctaataaagcaaaagaagaatacaatcaagcaatgaagaagtacaaggat
agtggcgcggcagacgagttcaaacagaagaagaagcaagctgagaaggaacgtaaagct
gcagacaaaaagactaaagctccagcgagtaaaaaagttaaaactgtcgctgcaagctct
agttcggggaagtttaccagcaaagagtacattgatgatgatgacagctcctctgactcg
gacaaggagaaaaaagacaagaaggataaaaaggacaacaaagagagtaaagaatctaag
aaggaaaaagctaaacattcctcatcggaagctgcgtcgtcgggttcagacgagaccggc
agcgggagcgatagcgattaa
DBGET
integrated database retrieval system
