Vanessa cardui (painted lady): 124534361
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Entry
124534361 CDS
T09161
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124534361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124534361
Spliceosome [BR:
vcd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124534361
Complex C
U5 SnRNP specific factors
124534361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
CR6_interact
Motif
Other DBs
NCBI-GeneID:
124534361
NCBI-ProteinID:
XP_046966113
LinkDB
All DBs
Position
12:complement(3524974..3541486)
Genome browser
AA seq
2364 aa
AA seq
DB search
MSLPPYLLGPNPWATMMAQQQLAAAQQAALQAHAAAAAAAPPVPPAQPPKPHHIPEEKIK
EKAQKWHQLQTKRFADKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSRKYRHDKRVYLGA
LKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVVEPVYIAQWGTMWIMM
RREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEPIQIELDPEEDAAVANWFYDHK
PLLGTRHVNGSTYRKWNLSLPQMATLYRLANQLLTDLVDDNYFYLFDSKSFFTAKALNMA
IPGGPKFEPLVKDNSAGDEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNLPHFVQLSWY
HTPNVVYIKTEDPDLPAFYFDPLINPISHRHTVKSLDPVPEEEDFLLPEDVSPFLQETAL
YTDNTANGIALLWAPRPFNMRSGRSRRAIDVPLVKTWYKEHCPPGQPVKVRVSYQKLLKY
YVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRKNL
NYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIVDSHVQYRLNNVDSFQ
LADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVSKGPGCGFWAPG
WRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMHDI
VDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKMKADWWTNT
AHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYTTT
VHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDN
PHEALSRIKRHLLTQRTFREVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKR
RLLPPWVKPADTEPSPLLVYKWCQGINNLQDVWEVGEGECNVLLESRFEKLYEKIDLTLL
NRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVLDLLVL
GLQRASEMAGPPQLPNDFLSYQDRAAEGAHPIRLYCRYIDRIHIFFRFTAEEARDLIQRY
LTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENS
FVSVYSKDNPNLLFNMAGFECRILPKCRSQHEELSHRDGVWNLQNEVTKERTAQCYLRVD
DESLARFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCEN
KIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHF
RSGMSHDEDQLIPNLYRYIQPWEAEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWD
RGIPRINTLFQKDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTD
MIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRR
FTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVMDL
CQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFSAYKWNVSRPSLLADTKDTMD
NTTTQKYWLDIQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGLLIAIDLAYNLHS
AYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGELFS
NQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRL
GQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPF
QACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNTERTKVL
LKPDKTTLTEQHHIWPTLSDDDWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILG
MEISAPSAQRQQIAEIEKQSKEQSQLTATTTRTVNKHGDEIITSTTSNYESQTFSSKTEW
RVRAISATNLHLRTNHIYVSSDDIKESGYTYILPKNLLKKFVTISDLRAQIACYLYGTSP
ADNPQVREVHCAVLPPQWGTHQAVHLPRQLPKHPALAHLQPLGWMHTQPNELPQLSPQDI
TTHAKVMAENPSWDGEKTIIITCSFTPGSCSLTAYKLTPSGYEWGAKNTDRGNNPKGYLP
SHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGNPREFYHEVHRPAH
FMNFAAMEDATAPTLAADREDHFA
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgccgccctatcttttggggcctaacccctgggccaccatgatggcccagcag
cagttagcggcggcgcagcaagcagcattgcaggctcacgccgccgctgctgcagctgcg
ccaccggtgcccccagctcaacctcctaaacctcatcacattcccgaggaaaagatcaaa
gaaaaagctcaaaaatggcaccaacttcaaacaaaacgctttgcggacaaacgaaaattt
ggattcgtcgatgcccaaaaagaagacatgccacctgaacacatccgtaaaattattcgg
gatcacggcgacatgaccagtcgcaaatatcgacacgacaaacgcgtgtatctcggggct
ttaaaatatatgccacatgctgtcatgaagctgttagaaaatatgccaatgccttgggaa
caaatcagagatgtaaaagttctgtaccacataaccggtgctattacattcgtcaatgaa
attccatgggttgttgagccagtttatatagcgcagtggggaacaatgtggatcatgatg
cgtagagaaaaacgtgatcgtcgtcatttcaaacgcatgagatttccgcccttcgatgat
gaggaacctcccttagactacgctgacaacattttagatgttgagcccttggaacctatt
cagattgaattagatcccgaagaagatgcagctgttgctaactggttttatgatcataaa
cctctcttaggtacaagacatgtcaatggatcaacatacagaaaatggaacttgtcatta
ccacaaatggcgactctataccgccttgctaatcaattacttactgatttggtggatgat
aattatttctaccttttcgattcaaagagtttcttcactgcaaaagctttaaatatggca
atacccggtggaccaaaatttgagcctcttgtaaaggataactcagctggtgatgaagat
tggaatgagttcaatgacattaacaagattattattcgtcagccaattagaacagaatac
aggattgcattcccatatttgtataacaacttgccacattttgttcaactttcttggtat
cataccccgaatgttgtatacatcaagactgaagatccagatttaccagctttttacttt
gatcctctgatcaatccaatctctcatcgccacacggtaaaatctttagatcctgtgcct
gaggaagaagatttcttgttaccagaagatgtttccccattcttacaagagacagctttg
tacactgataatactgcaaatggcattgcacttttgtgggctcctaggccttttaacatg
agatcaggtcggagtcgtcgcgctattgacgttccattggtcaagacctggtacaaagag
cattgtcctcccggccaacccgtaaaagtgcgtgtgtcttatcagaaactgctcaagtac
tatgtgctaaatgcgcttaaacatcgaccaccgaaacctcaaaagaagaggtatctattc
cgttccttcaaatcgacgaagttctttcaaacaacgacccttgactgggtggaggctggt
ctccaggtgtgcagacagggctataacatgctaaacttgcttattcaccgaaagaatctt
aattacttgcatctcgactataacttcaatctgaagcctgttaaaacactcacaacaaaa
gagagaaagaagtcacgtttcggaaatgcattccacttgtgtcgtgaaattcttcgcctc
actaaattaatagtggactcccatgtgcaataccgacttaacaatgttgactccttccaa
ctggccgacggtctgcaatacatattcgcacacgtcggtcagctaaccggcatgtacaga
tacaagtacaaattgatgagacaaatacgaatgtgcaaagatttgaagcatcttgtctac
tatagatttaatacgggccccgtatcaaaaggtcctggttgtgggttctgggccccaggt
tggcgagtatggctgtttttcatgcgcggtatcacgccgcttctggagcgctggctcgga
aacttgctttccaggcagttcgagggacgacattcgaaaggtgttgctaagactgtgacc
aaacagcgcgtcgagtcccacttcgacttggagctgcgtgcgtctgtcatgcacgatatc
gtggatatgatgcccgaaggtatcaaacaaaacaaagctagaacaatcttgcagcatttg
tcagaggcctggaggtgttggaaagctaatatcccatggaaggtgccaggactcccaact
ccaatagaaaacatgattcttcgttacgtgaagatgaaagccgattggtggactaacact
gcgcactacaatcgtgaacgtatccgacgtggtgctacagttgataagaccgtgtgtaag
aagaacctgggtcgtcttacgagactgtatctcaaagcggaacaagaaaggcagcacaac
tacctgaaggatggtccctatatctcgcccgaagaagccgtagcaatctacacaacgacg
gtccactggcttgagtctcgacgtttcgcgcctattcctttcccaccgctatcgtacaag
cacgacacaaagttgctcatccttgctttggaacggctaaaggaagcctatagtgtcaaa
tcaaggctcaatcagagtcagagagaagagttaggtcttatagaacaagcctacgataac
ccccacgaagctctctccagaatcaaacgtcacttgctcacccaaagaacttttagagaa
gttggtatagaattcatggacttatattcacacctggtgccagtttacgacgtggagcct
ctggagaagataacggatgcgtatcttgaccagtatttgtggtacgaagctgacaaacgt
cgtttgctgccgccttgggtaaagccggctgacaccgagccctcgccgctactcgtatac
aaatggtgccagggtatcaataacttacaagacgtatgggaagtcggcgaaggcgagtgt
aatgtattgctggaatcccgctttgaaaagttgtatgagaaaattgatttgacgcttctt
aatcgtctcctgcgtttgatcgtggatcacaatattgctgactacatgacggctaaaaat
aacgttgttattaattacaaggatatgaaccacacaaattcttatggcatcattcgtggt
cttcaatttgcgtcattcatagttcaatactacggtttagtacttgacttgctcgtactg
ggtctccagagggctagtgagatggcaggaccaccacaattacccaatgacttcctctct
taccaagacagagcagcagaaggggctcatcctattcgcctttattgtagatacatagac
cggattcatatattcttcagatttactgcagaagaggctcgtgatcttatccagcggtat
ctcactgagcatcctgacccaaataacgagaacattgtcggatacaacaacaagaaatgc
tggccgcgagatgcgaggatgcgtttgatgaagcatgatgttaacttgggccgtgcagtt
ttctgggatatcaagaaccgcttaccaagatctgtgactactattcagtgggagaacagc
tttgtatcagtgtactccaaggacaatcctaatttgttgtttaacatggctggatttgaa
tgcagaatattgcctaaatgccgtagtcaacacgaagagctgtcacatcgggatggtgta
tggaatctgcagaacgaagtgaccaaggaacgtaccgctcagtgttacctgcgtgtcgac
gacgagtcgctcgctaggttccataaccgtgtgcgacagattttgatggcttctggttcc
actacattcacaaagatcgttaacaagtggaatactgcccttattggtttaatgacatac
ttccgtgaagctgtcgtcaacacacaggagttattagatcttctcgtaaaatgcgagaat
aaaattcagactcgtataaaaatcggtcttaattcgaaaatgccttctcgtttcccgccc
gttgtgttttacactccaaaagaattgggcggacttgggatgttatctatggggcatgtt
ctaattcctcagtctgatctccgttggtcaaaacaaacagacgtaggtatcactcacttc
agatcaggaatgtcacatgacgaagaccagcttattcctaacttgtaccgctacatccag
ccttgggaggctgaattcgttgactcacagagagtatgggcagagtatgctctgaagaga
caagaggctaatgcccaaaacagacgattgacattggaagatttagaagattcatgggat
cgcggtattccaagaattaatacattgttccaaaaggaccgacacacactagcttatgac
aaaggatggcgcattaggacagagttcaaacaatatcaggttctcaaacagaatccgttc
tggtggacgcatcaacgacacgacggtaaactatggaacttaaacaactaccgtacagac
atgatccaggcacttggtggtgttgagggcattctggaacatacactattcaagggaacc
tacttcccgacgtgggaaggtttgttctgggagaaagcttctggttttgaagagtcgatg
aaatacaagaagttgactaatgcacagagatctggtttgaatcaaattcccaatcgacgc
tttacattatggtggtcacccaccataaacagagccaatgtatatgtgggcttccaggtg
caactggatttaacaggtatattcatgcacggtaagatcccaacattgaagatttctctc
attcaaatcttcagagctcacttgtggcagaaagtccacgagtccattgttatggacttg
tgtcaggtgtttgatcaagaactcgatgctttggagatcgaaacagtgcaaaaagaaaca
attcaccctcgaaaatcttacaaaatgaactcgtcatgtgccgatattctattgttctcg
gcctataagtggaatgtatctcgtccatctttacttgctgatacaaaggacacaatggac
aatacaacaactcagaagtactggttggatatacaacttcgttggggagattacgactca
cacgacgtcgagcgatatgctcgagctaagttcctagactacaccacagacaatatgtcc
atctatccatcaccaactggactcctgattgcaattgatcttgcttacaatttgcacagc
gcatatggtaactggttccctggctgcaagccgctcatccagcaagcaatggccaaaata
atgaaggcgaatcctgcgttatacgtattgcgtgagcgtatccgcaaagcacttcagctg
tactcgtctgaacccacagaaccgtacctttccagtcagaactatggagaattgttttcc
aatcaaattatttggttcgtagatgacactaacgtatatcgtgtcacaatacacaaaact
ttcgagggtaacttgacaacgaaacccattaatggagcaatcttcatcttcaatccacgc
actggtcaactcttcctcaaaatcattcacactagcgtgtgggctggtcagaaacgtctt
gggcagctcgcgaaatggaagaccgctgaggaagtggcggctttgattcgttcattgcca
gttgaagagcagcctaagcaaattattgttacaagaaaaggaatgttggatcctctcgag
gtgcacttgctcgatttcccgaacatcgtgattaagggctctgaactgcaattgccattc
caagcttgtctcaaagtggagaagtttggagatcttatcctaaaggcgactgaaccacag
atggtactgttcaacttgtatgatgactggctcaagactatatcatcttacacagccttc
agcagattgatattaatattgcgtgcactgcacgttaacacagaaagaactaaggttctc
ttaaagccagacaaaacaacactaacagaacaacatcatatttggcccaccttatctgat
gatgactggatcaaagtggaagtgcagctcaaggatcttatcctggccgattacggaaag
aaaaacaacgtcaatgtggcttcactaactcaatctgagattcgagatataatactcgga
atggagatttcggcgccatcagcccagagacaacagatagctgagatcgagaaacagagc
aaagagcagagtcaacttacggccacaaccacacgtaccgtcaacaaacatggtgacgaa
atcatcacctcaaccacaagcaactatgagtcacagacattcagttcaaaaaccgagtgg
cgagttcgtgcgatttccgcaactaatctccacctgcgtacgaatcatatctacgtcagc
tccgatgatatcaaggagagtggttacacatacattctaccaaagaatttgctcaagaag
ttcgtcaccatttcagatttgcgagcacagattgcttgctacctgtacggtacctcgcca
gctgacaatccccaagtccgcgaagtgcactgtgcggtgctgccaccacagtggggaacg
catcaagcggtgcatctcccgcgacaactgccgaagcatcccgcacttgcacatcttcaa
cccctcggttggatgcacacacagcctaacgaattgccgcaactatcccctcaggacata
acaacacatgctaaagttatggcagaaaacccgtcatgggatggcgaaaaaacaattatc
attacttgttcgttcactcctggatcctgttctctaactgcatataaacttacgccgagt
gggtacgaatggggcgctaagaatacggacagagggaacaaccccaagggctacctgcca
agccattacgagcgagtgcagatgttactttcagaccgtttccttggatactttatggtt
ccatcacaaggcagttggaattacaatttcatgggcgttcgacacgatccaaacatgaaa
tatggagtccaactcggcaatccccgggaattttaccatgaagtgcaccgacctgctcat
ttcatgaactttgcggcaatggaggatgccaccgctccaactttggccgcagatagagaa
gaccacttcgcttaa
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integrated database retrieval system
