Vanessa cardui (painted lady): 124534368
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Entry
124534368 CDS
T09161
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcd03009
]
124534368
Enzymes [BR:
vcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124534368
Ribosome biogenesis [BR:
vcd03009
]
Eukaryotic type
90S particles
Helicases
124534368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Thump_like
Motif
Other DBs
NCBI-GeneID:
124534368
NCBI-ProteinID:
XP_046966124
LinkDB
All DBs
Position
12:complement(764623..772886)
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AA seq
614 aa
AA seq
DB search
MDAYDIFKKLTKGLTFKRRVLGVKNVEQNIKTVLKKETELNNEEEEEVKKQEIEDDDNSI
EPSDVENESDEDENEDLQIIDGVTVEKKIKKKKSKLTPEELKKKLEIEQENHFRNEHGIK
AVGRHIPNALKDFNELVTKYKVAQSLVDTVSQCGYSEPTPVQRQAIPCLLEGRQIVACAP
TGSGKTAAFLVPLLHLLGAAQGGPRALVLCPTRELALQIHREALRLAAPTLLRCSVVRSC
KQSKIKERENTIKKSDLVISTPNRLCYLLNQENVGITLDKVQWLIIDEADKLFEGTTEEV
DTFRQQLDVIMGFCKAKLAMFSATHTPAIAKWARHNMRGLINVTVGLRNAASTSVDQELL
FCGNENGKLVAFRQLVQKGLKPPVLVFVQSKDRAKQLFKELIYDGINVDVIHADRTQAQR
DNVVRSFRTGRIWVLICTELMGRGIDFRGVNLVINFDFPPSAIAYIHRIGRAGRAGQKGR
AITFFTQDDVTNLRSIASVMKQSGCEVPEYMLKLKQDANKRKKLSKKAPHRDKISTILQK
PEKRKLETQDAKESNKTKDTDNVKNGKNKKLRKIQNGVMKKDRPQKEKTKMGNEAKKSHK
IGQNKRKKKKMNKV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctacgatatttttaaaaaactgacaaagggccttacattcaaacgtcgtgtt
ttaggagtgaaaaatgtcgagcaaaatataaaaactgttctaaaaaaggaaacagaatta
aataatgaggaggaagaggaagtaaaaaaacaagaaattgaagatgatgacaattcaatt
gaaccatcagatgttgaaaatgaaagtgatgaagatgagaatgaggatctccaaataatt
gatggtgttacagtagagaagaaaatcaagaaaaagaaatctaaattaacacctgaggaa
ttaaagaaaaagcttgaaattgaacaggaaaatcattttcgcaatgaacacggcatcaaa
gcggtgggtcggcatattccaaatgcattgaaagatttcaatgagctagtaaccaaatac
aaagtagcacaatcactagtggacacagtgagtcagtgtggttactctgaacccacacca
gtgcagcgtcaagccataccctgtttattggagggtcgtcagatagtagcctgtgccccg
acgggctccggcaagacggcggcgttcctggtgccgctgctgcacttgctgggcgcggcg
cagggcgggccgcgcgcgctggtgctgtgccccacgcgcgagctggcgctgcagatccac
cgcgaggcgctgcggctggcggcgcccacgctgctgcgctgctccgtcgtcaggagctgc
aagcagagcaagatcaaggaacgggagaacaccattaaaaagagtgatttagtgataagt
acaccgaatcgtctctgctatttgctgaatcaagaaaatgttggcattacgttagataaa
gtccaatggctaatcatcgatgaggcagacaagttgttcgaaggcaccacggaggaagtc
gacacgttccgccagcagctcgacgtcatcatgggcttctgcaaggctaagctggccatg
ttcagcgccacccacacccccgccatcgccaagtgggcgcggcacaacatgcgcggactc
atcaacgtcaccgtcggactcaggaatgcagcctccacatcagtagaccaagagctgctg
ttctgcgggaacgagaatggaaagctggtggcgtttagacaactcgtacagaaaggactt
aagcctccggttttagttttcgtgcaaagtaaagaccgtgcgaagcagctgttcaaggaa
cttatctacgacggtatcaacgtagacgtcatccacgccgacaggacgcaggcgcagcgt
gacaacgtggtgcgcagcttccgcacggggcgcatctgggtgctgatctgtacggagctg
atgggtcgcggtatcgacttccggggcgtcaacctcgtgatcaatttcgatttcccgccg
tccgccatcgcttatattcacaggataggtcgagcgggccgagcgggacagaaaggtcgc
gccatcacgttcttcacgcaagatgacgtcaccaatctcagaagcattgcttcagtaatg
aaacagtccggctgtgaagtaccagaatacatgttgaaactcaaacaggacgccaacaaa
aggaaaaagttgtcaaagaaggcgccacacagagacaaaatatcaacgatcttgcagaaa
ccggaaaaacgtaaacttgaaactcaagacgcaaaggaaagtaacaagacgaaagacaca
gataatgttaaaaatggaaagaataaaaaattaaggaaaatacaaaatggagtaatgaag
aaagacagacctcagaaagaaaaaacgaagatgggaaatgaagcgaaaaaatcacataaa
ataggtcaaaacaaacggaaaaagaagaaaatgaataaagtgtga
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