Vanessa cardui (painted lady): 124534381
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Entry
124534381 CDS
T09161
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5
KO
K13174
THO complex subunit 5
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03013
Nucleocytoplasmic transport
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124534381 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
124534381 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcd03019
]
124534381 (thoc5)
03041 Spliceosome [BR:
vcd03041
]
124534381 (thoc5)
Messenger RNA biogenesis [BR:
vcd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124534381 (thoc5)
Spliceosome [BR:
vcd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124534381 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
124534381
NCBI-ProteinID:
XP_046966150
LinkDB
All DBs
Position
12:5064243..5067624
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AA seq
690 aa
AA seq
DB search
MGKDDVSTKKRRKLNTTSSENTKQSPTDIYKRVIEFEETEAQLRSAEKDSALFKKICQDV
RQLFADIAELKAKGTDEAKEKITAKRIEASLHLVALKKLNRLEKVRTRAGRDALHKEKQR
VDSTHLLLQNLLYEADHLNKEVTKCLQFKSKDEEIELISLEEFYKDAPTEISRPEITKAD
EHQLQLARLEWELRQRRELAGACSELVASKERVAAAIAAARSRLDALAPHLKDVLKATKP
LQECLALRLDEKRDETRAATLLSPPLFLLYANANAYSDALGSKNISVGISGDEDEARRLD
QLSNVESELVVSNDSDSDQENNDEDQRDSKKKRHHRSSKISKEEKAEAKKKEVLKKHPLN
VQVTITNSDGTALNLIFSYMIHLKIVVVKFTMNFPKPITGVSAADVLNGDCVLNELYVGD
TGNDSPHPATAYLLKAAGISENFPHFIPEVGKPYIWAQRMCGLDFMAVSVDTQKCNKNFL
PCQSLSVASVENFIFTLKKRLRARIDLMKELQDLECGKVLPAKGLSCPVRLSGSLTQWQT
VSWHEYSQALSTSFVISEGLVTPDNMLYRAIITRQSAKLVAMVAVSSDYPKQAPIFSLTL
HWNGTHHVGTSDDIRDIERVINTDWQNTEKKQCTLSTQMMKLLTCLDVLLETMGSSEFPP
DKVMLQSIRGRNRMKPYKYLKQGTGIFVQY
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagacgatgtatcaactaagaagcggcgtaagttaaacacaacatcgagcgaa
aatactaaacagtcaccaacagatatatataagagagtaatcgaattcgaagaaaccgaa
gcacaactacgttctgctgaaaaagattctgctctgtttaaaaaaatatgccaagatgtg
agacaactgtttgcagatattgcagaattaaaagccaaaggaacagatgaggcaaaggaa
aaaattactgcgaaaagaattgaagcttccttacatttggtagcattaaagaagcttaat
cgcttggaaaaagtccgtacaagagctggccgtgatgcattacataaagaaaaacaaaga
gtggattcaacacatttacttttacaaaatttgctatatgaggctgatcatttaaataaa
gaagtaactaaatgtttgcaatttaaatctaaggatgaagaaatagaattgatatctttg
gaagaattttataaagatgcacctactgaaatttcacggccagaaattacaaaagctgat
gagcatcaattgcaactagcaaggcttgaatgggaactgcgtcaacgcagagaactggct
ggggcatgtagtgagttagttgcttccaaagaacgtgtggctgcagccatagccgctgcc
cgctctagattagatgctttggcccctcatcttaaggatgtattgaaggccacaaagcct
cttcaagaatgtttagcattaagactagatgaaaaaagagatgaaactagagctgcaaca
ctgctttcaccacctttgtttctactctatgccaatgctaatgcatactcggatgctctt
ggctccaaaaatatttctgttggtatatctggagatgaagatgaagcaagaaggcttgat
caactctcaaatgttgaaagtgaattagttgtttcaaatgattctgattcagatcaagaa
aataatgatgaagatcaaagagattctaaaaagaagcggcatcacaggtcatctaaaata
tcaaaagaggagaaagcagaagctaagaaaaaggaagttctcaaaaaacacccattaaat
gttcaagtgactattactaatagtgatggtactgcattgaatcttattttttcatacatg
atacatcttaaaatagttgtggttaaatttactatgaattttccaaaacctattactgga
gtgtctgctgcagatgttttaaacggtgattgtgttttgaatgaactatatgttggtgac
acgggtaatgactcaccacatccagcaactgcttacttattgaaagctgctggtatatca
gaaaattttccacattttattccagaagttggtaaaccatacatatgggctcagagaatg
tgtggactagactttatggcagtatctgttgatactcaaaaatgcaataaaaactttctt
ccttgtcaaagtcttagtgttgcaagtgttgaaaattttatttttactttaaagaaaaga
ctcagagctaggattgatttaatgaaagaattgcaagatttagaatgtggtaaagtttta
cctgcaaagggcttatcgtgtcctgttagattatctgggtctttgacccaatggcaaacg
gtttcttggcatgaatatagtcaagctctttcaacatcatttgttatatctgaaggattg
gtgactcctgataatatgctgtaccgtgcaattatcacaaggcaatctgctaaacttgtt
gcaatggtagcagtaagtagtgattacccaaagcaagcacctatcttttcattaacttta
cactggaatggaacacaccatgttggcacaagtgatgacattagagatatagaaagagta
attaatacagattggcaaaatacagaaaaaaagcagtgcactctttccacgcaaatgatg
aaactattaacatgtctggatgttcttttggagacaatgggatcctcagaattccctcct
gataaagttatgttacagtctatcagaggaagaaatagaatgaagccatacaagtattta
aaacaaggtactggaatttttgtacagtattaa
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integrated database retrieval system
