Vanessa cardui (painted lady): 124534545
Help
Entry
124534545 CDS
T09161
Name
(RefSeq) chondroitin sulfate synthase 1 isoform X1
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
vcd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
124534545
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vcd01003
]
124534545
Enzymes [BR:
vcd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
124534545
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
124534545
Glycosyltransferases [BR:
vcd01003
]
Glycan extension
O-Glycan
124534545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Glyco_transf_7C
Glyco_tranf_2_2
Galactosyl_T
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
124534545
NCBI-ProteinID:
XP_046966393
EnsemblRapid:
ENSVCAG00000007254
LinkDB
All DBs
Position
13:10650175..10714995
Genome browser
AA seq
868 aa
AA seq
DB search
MPRRSKWMHLVAGVVAGVTLGVFLKLCLRTSSRTSIEACPDAAKLYVAPEPLSIIDLRTD
ETIYNSNRTLVFVGVMTAEQYLTTRARAVFDTWAQDLPGRIAFFSSEVSRAPGLPLIPLR
SVDDSYPPQKKSFLMLLYMYEHYGERFEWFMRADDDVYVRGDKLGEFLRSVDSRKPQFIG
QAGRGTSSERDALALDYNENFCMGGPGVLISRETLRRVAPHVKYCLKHLYTTHEDVELGR
CVAKFAGVSCTWSYDMQTILHHNGSGAAAYTGRLKKREVHRAITLHPVKDHRQMYRLHTY
FKNLHIQDLREQSLDLHRDISSSVRELGVATDEVANFVLPGDVPLFPVKIGEPGYLGNNK
ILGAPIDFNRYKPDTVEDIVPFDFISKSIYSVSHSNPKRRIETPLKEAMDDVIREVMEII
NAPSRQRGRVIDFNELLYGYTRLQPLHGADHVLDLLLRYRRYRGRKLTAAVRRHAYLQQS
FTGTDIRELPMGEPPPVEEPEILEQLDLNGKNYQNDYEDFDDPQVQNSFLDISKLNVREA
FENSLLKIQSNLPKVLKWGDDEYEYPIYDRRIHFVLPLLGRFEVFNRFMKNYEDIVLKSD
EAVSLIVVLYLDSKSPLDYSNSESLVNHYRDVYGKDIKIVQMGSTTFSRGAALTEGIKQC
SSDSLVFFIDVDMMFNHVTLRRIRINTVKYHQVYFPIVFSEYNPEVVYGDDYNKFKDETL
VMNTDLGKYVESEDGATKSDRELANLKYSKVINDDFGYFRQYGFGILSIYKCDFDRVGGF
DLNIKGWGLEDVELFETLIKSNLTVYRIADETLVHIFHSVDCDKKLEKSQFLMCLGTKAS
TYGSEKHMTYYMLNHPEVLWPQGEKGAS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaagaagtaagtggatgcatctggtggctggcgtcgtcgccggtgtcacgctc
ggtgtgtttctgaaattgtgcttaaggacatcttcgaggacttctattgaagcctgccca
gatgcggcgaaattgtatgtcgctccagaacctttgtcaattatagatttaagaactgat
gaaactatttacaattctaatagaactcttgtgtttgttggtgttatgacagcggaacaa
tatttaacaacaagggctagggctgtttttgatacgtgggcgcaagatttacctggacga
attgcatttttcagttcagaagtgtcgcgggcgccaggactacctcttattccattgcgt
agcgttgatgatagttatcctcctcaaaagaaatcttttcttatgttgctatacatgtac
gagcactatggtgaaaggtttgagtggttcatgcgtgcggatgacgacgtgtatgttaga
ggagataaattaggagagtttttacgttctgtggatagcagaaaacctcaatttataggt
caagcgggaagaggtacaagctctgaaagagacgctttggcgttagattataatgaaaac
ttttgtatgggtggaccgggagtgctaatatctcgagaaacattgagacgagtcgcccct
catgtcaagtactgcctgaagcacctttacacaacgcacgaggacgttgagctgggtcgg
tgtgtggccaaatttgctggggtctcttgcacgtggagttacgatatgcaaacgatccta
catcacaacgggagcggcgcggccgcgtacactgggcggctcaagaagagggaggtccac
cgtgccattacgttgcatccagtgaaggaccaccgacagatgtacagattacatacgtat
tttaagaatcttcacatccaggacctcagagaacaatcgttagatcttcacagggatata
tcatcatctgttcgcgaactcggagtcgcaaccgacgaagtggcaaacttcgtgctccct
ggcgacgttccactcttccctgtaaaaataggagaaccgggatacttgggaaacaataaa
atactaggtgctccaattgactttaatagatacaaacccgacacagtggaggacatcgtg
ccattcgatttcattagcaagtctatttattccgtgagccattctaaccctaagcggagg
atcgagactccgctgaaagaggctatggatgacgtcataagggaggtgatggagataata
aacgcgccgtcacgccagcgcgggcgcgtgatcgacttcaatgagttgctgtacggctac
acgcgcctgcagccgctgcacggcgccgaccacgtgctcgacctcctgctgcgataccgg
cgctaccgcggccgcaagctcaccgccgccgtgaggcgacacgcctacctgcagcagtct
ttcacggggactgacatacgagagttgcccatgggcgaacctccaccagtcgaggagccg
gaaatacttgagcagttagatctcaacgggaaaaattatcagaacgattatgaagacttc
gacgatccacaggtgcagaacagtttccttgatatcagcaaattgaacgtcagagaagcg
ttcgaaaatagtttgcttaaaatacagagcaatttaccaaaagtcctgaaatggggtgac
gatgaatacgaataccctatctatgatagacggatacacttcgttctcccattactagga
aggtttgaggtcttcaatcgatttatgaagaattacgaagatatcgtcttaaagagcgac
gaagctgtctcgcttatcgtagtactatatttagatagcaaaagcccattagattattca
aattcagaatcattggtgaatcactacagggatgtctatggaaaagatataaaaatagtt
caaatgggttcgacgacattttcgagaggtgccgccttaacagaaggcatcaagcagtgt
tctagtgatagtctagtattcttcatagacgtggacatgatgtttaaccacgttaccctc
aggagaataagaatcaacacggtcaaatatcaccaagtgtactttccaatcgtattcagt
gaatataatcctgaagtcgtttacggcgacgattataacaaattcaaagacgaaactctc
gttatgaatacagatttaggtaaatacgtggaaagcgaagacggtgctactaaaagtgat
agagaattagcgaatttgaaatatagtaaagtgataaatgatgatttcggttatttcaga
caatacggttttggtatacttagtatttataaatgtgactttgatcgagtcggtggtttc
gatttgaatataaaggggtggggtttggaggacgtggaattgttcgagactttaataaag
tcgaatttaacggtgtatagaatagcggacgagacgttagtgcatatctttcactctgtt
gactgtgataagaaattggaaaagagtcaattcctcatgtgtctcggaacaaaggcttcc
acttacggtagcgagaagcacatgacatattacatgcttaatcatcctgaagttttgtgg
ccgcaaggggagaaaggtgccagctag
DBGET
integrated database retrieval system
