Vanessa cardui (painted lady): 124534745
Help
Entry
124534745 CDS
T09161
Name
(RefSeq) sorting nexin-27
KO
K17936
sorting nexin-27
Organism
vcd
Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcd04131
]
124534745
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
vcd04990
]
124534745
Membrane trafficking [BR:
vcd04131
]
Protein recycling
Others
Others
124534745
Domain-containing proteins not elsewhere classified [BR:
vcd04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124534745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
Sina_TRAF
PDZ_2
FERM_N
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
124534745
NCBI-ProteinID:
XP_046966701
LinkDB
All DBs
Position
13:965632..983082
Genome browser
AA seq
528 aa
AA seq
DB search
MAETETDNNSIVRPDKNNKGTVTNNGPRRVTIYKTDTGFGFNVRGQVSEGGQLRSINGEL
YAPLQHVSAVLEQGAAEQAGIRKGDRILEVNGVNVEGATHKQVVDLIKSGGDCLTLTVIS
VTPKEAERLEPGDDGTAPVGVIGGAANSRATVYQRYDYTDKRSLPVSIPDYRIVMERNTG
RSYVAFNVHMAGRHLCSRRYREFAALHQLLRKEFLGFNFPKLPGKWPFTLSEQQLDARRR
GLEQYLEKVCAVRVIAESDAVQEFLTDSDDSSNPSPVDLKVLLPDKEVVTVSVLKSTNAD
DVYRAVCEKIGLSKAVQKYFYLFEIVEYNFERKLQPNECPHSLYIQNYSTASSSCLSIRK
WLFNPEREISVVKEDEKAAAFIFWQAVEDVNRGVCVAGARLYQLKALQDVRRAGDYLALA
RTLPGYGHVAFPPARTDCAAAPALALTLGWAGLTLAPWSDAGAGPDVRVPWRDVREWRAD
DAAAAARLLYRPRDRPPRALALHTPYYQFLCNCMDRIAEEASWVDTGE
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacagaaaccgataataacagtattgttcggcccgataaaaataataagggc
actgtgacaaataatggccctcgtcgcgttaccatttacaaaactgacaccggttttggt
tttaatgttcgcggtcaggtttccgagggcggccagttaagatcgatcaatggtgaatta
tatgctcctttgcagcacgtcagtgctgttctggaacagggtgcagcagagcaagctggt
atcagaaaaggggacagaatcctagaagtcaatggggtgaacgttgaaggcgcgacccac
aagcaagtggtcgatctcatcaagtcagggggcgactgtctcacacttaccgtaatatct
gtcacacctaaggaggcagaacggttagagcctggagacgatggaactgctccagttggc
gttatagggggagcggcaaattcacgggcgaccgtctaccaacggtacgactacacagac
aagcggtcgttacccgtttctataccggattaccggatcgtgatggagcgtaacacggga
cggtcgtacgtggccttcaatgtccacatggctgggcggcacttgtgcagccggcgctat
agggagttcgcagctctgcatcaactcctgaggaaagaatttctcggttttaattttcca
aagttacccgggaagtggccgtttacattaagcgaacaacaattggacgcaaggaggaga
ggtctcgaacagtatttagaaaaggtatgcgcagtacgcgtgattgctgaatctgatgct
gtacaagaattccttacagattcagacgattcctcgaatccatcaccagtagacttaaaa
gttctacttccagataaagaagtagtcacggtttcagtattaaagtcaaccaatgctgat
gatgtttatcgggccgtctgtgaaaagatcggcctctcgaaggccgtgcaaaagtatttc
tatctgtttgaaattgtcgagtataattttgaacgtaagctgcaaccaaacgaatgcccc
cactccctgtacatccagaactactcgacagcgtccagcagctgtttgtcgatacgcaag
tggcttttcaaccccgagagggagatatcggtcgtgaaggaagacgagaaagctgccgct
ttcatattctggcaggccgtggaggacgtgaaccgcggcgtgtgcgtggcgggcgcgcgg
ctgtaccagctgaaggcgctgcaggacgtgcggcgcgccggcgactacctggcgctggcg
cgcacgctgcccggctacggacacgtggccttcccgcccgcgcgcaccgactgcgccgcc
gcgcccgcgctcgcgctcacgctgggctgggccggcctcacgctcgcgccctggagcgac
gccggcgccgggcccgacgtgcgcgtgccctggcgcgacgtgcgcgagtggcgcgccgac
gacgccgccgccgccgcgcgcctgctctaccgcccgcgcgaccgcccgccgcgcgcgctc
gcgctgcacacgccctactatcagtttctgtgcaactgtatggatcgaatagcggaggaa
gcgagctgggtcgacaccggcgaataa
DBGET
integrated database retrieval system