Vanessa cardui (painted lady): 124534795
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Entry
124534795 CDS
T09161
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124534795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124534795
Spliceosome [BR:
vcd03041
]
Complex B
Other components
Prp19-related factors
124534795
Complex C
124534795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
124534795
NCBI-ProteinID:
XP_046966766
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Position
13:complement(13537077..13540251)
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AA seq
396 aa
AA seq
DB search
MAMSKSTNTYNRQNWEDADFPILCQTCLGDNPYIRMTKEKYGKECKICVRPFTVFRWCPG
ARMRFKKTEICQTCSKLKNVCQTCLLDLEYGLPIQVRDAALKVQDDLPRNEVNKEYYIQN
LDSQMSKFDPTQPSNSALKSKGASDLLLRLARTAPYYKRNRPHVCSFWVKGECRRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVAEKLMRRAAAMPALPPPEDRTVTTLYIGNLP
ENIVEEELRGHFYQYGEIRSLTLVPRAQCAFVQYTTRSAAEHAAEKTFNRLVIAGKRLTI
KWGKSQGRQGTNEKSEPPPPLEPVPGLPGTLPPPPAFLHPFPPQMPPPPSRPNDFFNLHY
AGGWGAWGAPPPPALHYPSQDPARLGAHAHASQPQT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggctatgtcaaaatcgacaaacacatacaatcgtcaaaattgggaagatgctgatttc
ccgattttgtgccaaacatgtctcggtgataacccctacattcgaatgacaaaggaaaaa
tatggtaaagagtgtaaaatttgtgttcgtccattcactgtgttccgttggtgtcccgga
gcgagaatgcgtttcaagaaaaccgaaatttgtcaaacgtgctccaaattgaagaatgtt
tgtcagacctgtctcctagatcttgaatatgggctgccaattcaggttcgagatgccgcc
cttaaagtacaggatgatttacctcgcaatgaggttaataaagaatattatatacagaat
ttagatagccaaatgtctaagtttgatccaactcagcctagcaattcagcattgaaatca
aagggtgcctcagaccttctattacgattagcgaggactgcaccctactataagaggaat
aggcctcatgtatgttcattttgggtaaaaggcgagtgccgaagaggtgaagagtgtcca
tatagacacgagaagcctactgatcctgatgacccattggccgaccaaaacatcaaggac
agatactatggtgtcaatgatcctgtggctgagaagttgatgcgtagagcggctgctatg
ccagcccttcctccccctgaggacagaacagtaaccacactgtatattggtaacctccca
gagaatattgttgaggaagagttgagaggacatttttaccaatatggcgagataagatcc
ctgacattagtaccaagagctcaatgtgcatttgtgcaatacacaacccgcagtgcggct
gaacacgctgcagagaaaaccttcaacagactagttattgctgggaaaagacttactata
aagtggggtaaatcacaaggtcggcaaggtaccaatgagaagagtgagccaccaccacca
ctggaacctgttcctggtttaccggggaccctgccaccaccacctgcttttctacatcca
ttcccaccgcagatgccgccgccgcccagccggcctaacgatttcttcaacctgcactac
gcgggtggttggggcgcttggggcgctccgcccccgccagcgctgcactacccgagtcag
gaccccgcacgcctgggtgcgcacgcgcacgcctctcaaccacagacctag
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