KEGG   Vanessa cardui (painted lady): 124535000
Entry
124535000         CDS       T09161                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
vcd  Vanessa cardui (painted lady)
Brite
KEGG Orthology (KO) [BR:vcd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vcd03041]
    124535000
Spliceosome [BR:vcd03041]
 Complex B
  Other components
   Complex B specific factors
    124535000
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_SCAP PALB2_WD40 WDR54 Beta-prop_IP5PC_F LisH_WDR26 Beta-prop_NOL10_N DUF7165 LisH_PAC1 zf_topless VPS8_N
Other DBs
NCBI-GeneID: 124535000
NCBI-ProteinID: XP_046966965
LinkDB
Position
14:14582807..14586940
AA seq 517 aa
MSIEIESADVIRLIQQYLKESNLTKTLQTLQEETGVSLNTVDSVDGFCADINNGHWDTVL
KATASLKLPDKKLMDLYEQVVLELIELRELGAARTLLRQTHPCLLMKQQETDRYMHLENM
LARSYFDPREAYGGARGAAGGGKEWRRAALAAALAGEVSVVPSSRLLALLGQALKWQQHQ
GLLPPGTTIDLFRGKAAIRDEEDDQCPTQLSKIIKFGQKSHVECARFSPDGQYLVTGSVD
GLVEVWNFTTGKIRKDLRYQAHDEYMSMEEAVLSLAFARDSDTLAAGSNDGKIKVWKVST
GQVQRKLDHAHSKGVTCLQFTRDNTQILSASFDRSIRIHGLKSGKILKEFRGHTSFVNEA
VFTPDGHSVLSASSDGTVKVWSVRTGECSATLKPLGSGEPPVNSLLLTPKNPDHFVVCNR
TNTVVIMNMAGQIVRSFSSGRREEEGGALVCAALGARGRLVYCAGEDLVLYAFCAASGKL
ERTINVHEKSVIGMTHHPHQNLLATYGEDGLLKLWKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atgtctatagaaatagaatccgcggatgttatccgtcttattcaacagtatttgaaagaa
tctaacctcacgaaaacattgcagacattacaggaggagacaggggtgtctctcaatact
gttgatagtgttgatgggttttgtgcagacatcaacaatggccactgggatacagttttg
aaagcaacagcatctcttaaattacctgacaagaaactgatggatctctatgagcaggtg
gtattggaactaatagaattgcgggaacttggagccgcacgtacgctgctgcgacagact
cacccttgccttcttatgaagcaacaggagacagatagatatatgcatcttgagaacatg
ctggcgcgctcgtacttcgacccgcgcgaggcgtacggcggcgcgcgcggcgcggcgggc
ggcggcaaggagtggcggcgcgcggcgctggcggcggcgctggcgggcgaggtgtccgtc
gtgccgtcgtcgcgcctgctggcgctgctggggcaggcgctcaagtggcagcagcaccag
ggtctcctgcctcccggaactacgatcgatcttttccggggcaaagcggccataagggac
gaggaggacgaccagtgccctacgcagctatcgaaaattataaagttcggtcaaaaatca
cacgtcgaatgcgcaagattctctccagacggccagtacctggtgacgggctccgtggac
gggctggtcgaggtgtggaacttcacgacgggtaagatccgcaaggacttgcgctaccag
gcgcacgacgaatacatgagcatggaggaggccgtgctcagcctcgccttcgcacgggac
agcgacacgctggcggcgggctccaacgacggcaagatcaaggtgtggaaggtgtcgacg
gggcaggtgcagcgcaagctggatcacgcccactccaagggcgtcacgtgcttgcagttc
actcgtgacaacacgcagatcctctccgcttctttcgatcgatctatcaggatccacggg
ctgaagtcgggcaagatcctgaaagaattccgtggacacacctccttcgtgaacgaggcc
gtgttcacgcccgacggtcacagcgtgctcagcgcctcgtccgacggaaccgtcaaggtg
tggtcggtgcgcacgggcgagtgctcggcgacgctgaagccgctgggctccggcgagccg
cccgtcaactcgctgctgctcacgcccaagaacccggaccacttcgtggtgtgcaaccgc
accaacaccgtggtcatcatgaacatggcggggcagatcgtgcgctcgttctcgtcgggg
cggcgcgaggaggagggcggcgcgctcgtgtgcgccgcgctgggcgcgcgcggccgcctc
gtgtactgcgccggcgaggacctcgtgctctacgccttctgcgccgccagcggcaagctg
gagcgcaccatcaacgtgcacgagaagagcgtcatcgggatgacccatcacccgcaccag
aacctgctggccacgtacggcgaggacgggctgctcaagttgtggaagccgtag

DBGET integrated database retrieval system