Vanessa cardui (painted lady): 124535015
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Entry
124535015 CDS
T09161
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
124535015
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Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_13
LRR_LRWD1
LRR_9
LRR_R13L1-DRL21
LRR_NLRC4
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
124535015
NCBI-ProteinID:
XP_046966991
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Position
14:10547774..10549897
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AA seq
568 aa
AA seq
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MNLDNSSRENSESLDTVPITVSPREKYHGMREKKLSAASLTNTEGARPKVVTVKHPESNK
PKPTARKNKPIQADLDVIKEFIRCRDEGVKRLDLSKSSITSLPPNVRDLTHLVEFYLYGN
KLVALPAEFGCLTNLQTLALNENSLTSLPDSLANLRCLKVLDLRHNKLSDIPEVVYRLTS
LTTLFLRFNRIRVVGDGIANLTNLTMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHL
PQEIGNCVNLSTLDLQHNDLLDIPETIGNLQALNRIGLRYNRLNAIPASLSNCKHMDEFN
VEGNSISQLPEGLLCSLTELTSLTLSRNSFMSYPSGGPAQFTSVSSINLEHNQIDKIPYG
IFSRARNLTKLNMKENLLSSLPLDIGTWVNMVELNLGTNQLVKLPDDIQSLVNLEVLTLS
NNLLKRIPPSIGNLRKLRVLDLEENKIEVLPNEIGFLQELKKLVVQSNQLISLPRSIGHL
VNLTYLSVGENNLQYLPEEIGTLENLESLYLNDNPNLCNLPFELALCVSLQIMSIENCPL
TSLPPEVVSSGPSLVIQYLKSQGPYRAM
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgacaattcatcaagagaaaactcggaatcattagatacagtaccgattaca
gtaagcccgagagaaaaatatcacggtatgagggaaaaaaagttatctgcggcttcttta
acaaacacagagggagcacgacccaaggttgttactgtgaaacatcccgaatcaaacaaa
cctaaacccacagctcgaaaaaataaaccaattcaggcagatcttgatgttattaaggaa
ttcattagatgtcgggatgaaggcgtgaaaaggctagatttgagcaaatcctctataaca
tcattgccaccaaatgtaagagatttgacacatctagtagaattttatttatatggaaat
aagttagtggcccttcctgcagaatttggttgtttaactaacttgcagacattagctctg
aatgaaaattctcttacaagtttaccagattcattagctaatttgagatgcctgaaagtg
ttggatttgcgacataacaaattgagtgatataccagaagttgtttatagattgacatct
ctaactacactctttttaagatttaatagaattagagtagtaggagatggcattgctaat
ctcacaaaccttactatgttgagtttaagagaaaataaaattaaagaattatcttcagga
attggaaaattggtaaacttggttacttttgatgtttctcataaccatttggagcatttg
cctcaggaaatcggaaactgtgttaatctgtccacattagatctccagcataatgatttg
ttagatattcctgagacaattggaaatcttcaagcattgaaccgcattggtcttcgatat
aacaggcttaatgctatacctgcctcactgagcaattgcaagcacatggatgaatttaac
gttgaaggaaattctatatcccaattaccggaaggtcttctatgtagtttgacagagctc
actagtttgacgttatctcgaaattccttcatgagttacccaagtggtggaccagcacaa
ttcacaagtgtatcttcaataaatcttgaacacaaccagatagacaaaataccttatggg
attttttcaagggctagaaacctaactaaattgaatatgaaagagaatttgctttcatcc
ttaccactggatattgggacatgggtgaatatggtagaactcaatttaggtactaaccaa
ttggttaaactgccggatgatattcaaagtttagtgaatttagaagttctaacattatca
aacaatctgctaaaacgcattccacctagtattgggaatttgagaaaacttcgagttttg
gatttggaagaaaacaagattgaagtgcttcctaatgaaataggatttctacaagaattg
aagaagttagtagtgcaatctaatcaactgatatcactgccccgatcaattggtcacttg
gtaaacttaacatacttaagtgtaggtgaaaataacttgcagtatttgcctgaggaaatt
ggtacacttgagaatctagaatcattatatcttaatgacaatcctaatttgtgcaatctt
ccatttgagctggcattgtgtgtaagcttgcagattatgagcattgagaattgccccttg
acatcactgcctcctgaagttgtttcatcggggccctctttggtcatccaataccttaaa
tcacaaggaccctacagagccatgtga
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