Vanessa cardui (painted lady): 124535040
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Entry
124535040 CDS
T09161
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
vcd
Vanessa cardui (painted lady)
Pathway
vcd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124535040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vcd03041
]
124535040
Spliceosome [BR:
vcd03041
]
Complex A
Other components
Complex A specific factors
124535040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
124535040
NCBI-ProteinID:
XP_046967020
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All DBs
Position
14:14521703..14527636
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AA seq
695 aa
AA seq
DB search
MSSRHRDRSRSRSRDRDRHKERDKGRDRDRDKDRERDRDRDRDRDRDRDRDRDRNRDRDR
DRDRDRDRDRERHRSKRDKERDRSRSRDRHKEKRRSRSRSRSRSRGRKSKDRDGTIALLD
QMVGTTTKATARQVAAPTSINPATQAAILAAAAVAQTFVAQRRMAAPVQPAAAAAAALSA
ATAIPPPTSVQQKLEMMQARTESRYRDKPPFDHHPDDDKDDGQGPPGETAAERRARRRRT
RWMGSEHDKTFIPGLPTVLPSTLTREQEEQYLLQLQIEEVSRKLRSGDLGIPANVDERSP
SPEPIYSTDGKRLNTREYRTRRKLEEERHRLVQRMQQINPEFKPPPDYKPPIIRVHDKVM
IPQEEHPDINFVGLLIGPRGNTLKAMEKETGAKIIIRGKGSVKEGKVGRKDGQPLPGEDE
PLHAYITATNADCVKKAVEKIKEVIRQGVEVPEGQNDLRRMQLRELAQLNGTLRESDAPR
CANCSAADHKTWLCPDKPNVTNSIVCSSCGGAGHIARDCRARRPGHAPPAAHDKAKIDEE
YMSLMAELGEAPPGLGAGPMRRPAHSPFAPAHAPRAIMPAPGGAPPSLPPAPFPHAMPHA
PQHAPWLGSSAGASVSAAQPPPPGSAPPFPPPPPPHQGDNPMGPPSNGPGGPHMPPPPPG
MLGLGGWRGAFGPPWAAPPAAFLAPPPPPPPVSSS
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcgtcatagggataggagtcgatcacgatctcgggatcgtgatcgacacaag
gaaagagacaagggacgcgatcgtgaccgtgataaagatagagagcgagatcgtgatcgt
gatcgtgatcgtgatcgtgatcgcgatcgagatcgtgaccgtaaccgagatagagacagg
gacagagaccgggatcgcgaccgtgatcgcgaaagacaccgatctaaaagggataaggag
cgagaccgcagccgcagccgagaccgtcacaaagaaaaaaggcgaagtcgctcccgcagt
cggagtcgaagtcgtggaagaaagtctaaggacagggatgggaccattgcacttctggat
cagatggtgggaactactaccaaagctactgctcgacaagtagcagccccaactagcatc
aaccctgcaacacaagcagctatattggcagctgcagctgtagctcagacgtttgtggcg
cagcggcgcatggcggcgcccgtgcagcccgccgccgccgccgccgccgcgctgtcggcc
gccaccgccatcccgccgcccacgtccgtgcagcagaagctggagatgatgcaggcgcgc
accgagtcgcgctaccgcgacaagccgcccttcgaccaccacccggacgacgacaaggac
gacggccaaggcccgcccggcgagacggcggccgagcggcgcgcgcggcgccggcgcacg
cgctggatgggctcggagcacgacaagaccttcatccccggcctgcccaccgtgctgccg
tccacgctcacgcgcgagcaggaggagcagtacctgctgcagctgcagatcgaggaggtg
agccgcaagctgcgctccggcgacctgggcatccccgccaacgtggacgagaggtcgccg
tcgccggagcccatctactcgacggacggcaagcgcctgaacacgcgcgagtaccgcacg
cgccgcaagctggaggaggagcgccaccgcctcgtgcagcgcatgcagcagatcaacccc
gagttcaagccgccgcccgactacaagccgcccatcatccgcgtgcacgacaaggtgatg
atcccgcaggaggagcaccccgacatcaactttgtggggctgctcatcgggccgcggggg
aatacgcttaaggctatggagaaggagacgggtgcaaagataataatacgaggcaaaggc
tccgtgaaggagggcaaggtgggccgcaaggacggccagccgctgcccggcgaggacgag
ccgctgcacgcctacatcaccgccaccaacgcagactgcgtcaagaaagccgtcgagaag
attaaggaggtgatccgccaaggcgtggaggtgcccgagggacagaacgacctgcggcgc
atgcagctgcgcgagctggcgcagctcaacggcacgctgcgggagagcgacgcgccgcgc
tgcgccaactgctccgccgccgaccacaagacctggctctgtcccgacaagccgaacgtg
accaacagcatcgtgtgctcgtcctgcggcggcgcgggacacatcgcgcgggactgccgc
gcgcgccgcccgggacacgccccgcccgctgcgcacgacaaggctaaaatcgacgaggag
tacatgtcgctgatggcggagctgggcgaggccccgccgggactgggcgcgggccccatg
cggcgccccgcacactcgcccttcgcgcccgcgcacgcgccgcgcgccatcatgccggct
ccgggaggcgccccgccgtcgctgccgccggcgccgttcccgcacgcgatgccgcacgcg
ccgcagcacgcgccgtggctgggctcgagcgccggcgccagcgtgagcgcggcgcagccc
ccgccgcccggcagcgcaccgcccttcccgccgccgccgcccccgcaccagggagacaat
ccaatgggtcctccgtccaacggtcccggtggcccgcacatgccgccacctccgccgggc
atgctggggctgggcggctggcgcggcgcgttcgggccgccgtgggccgcgccgcccgcc
gcgttcctggcgccgccgccgccgccgccgcccgtgtcgtcgtcgtag
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